Removed completed TODOs.

ANN_Training.py

@@ -2,26 +2,15 @@
 """
 @author: Laura C. Kühle, Soraya Terrab (sorayaterrab)
 
-TODO: Give option to compare multiple models -> Done
-TODO: Add more evaluation measures (AUROC, ROC, F1, training accuracy, boxplot over CVF, etc.)
-    -> Done
 TODO: Add log to pipeline
 TODO: Remove object set-up
 TODO: Optimize Snakefile-vs-config relation
 TODO: Improve maximum selection runtime
-TODO: Discuss if we want training accuracy/ROC in addition to CFV -> Done (No)
-TODO: Discuss whether to change output to binary -> Done (Yes)
 TODO: Change output to binary
 TODO: Adapt TCD file to new classification
-TODO: Improve classification stat handling -> Done
-TODO: Discuss automatic comparison between (non-)normalized data
-    -> Done (Flag for comparison)
 TODO: Add flag for evaluation of non-normalized data as well -> Next!
 TODO: Add evaluation for all classes (recall, precision, fscore)
 TODO: Add documentation
-TODO: Separate model training in Snakefile by using wildcards -> Done
-TODO: Correct import statements -> Done (Installed new version)
-TODO: Remove unnecessary imports -> Done
 
 """
 import numpy as np

Plotting.py

@@ -3,9 +3,8 @@
 @author: Laura C. Kühle
 
 TODO: Give option to select plotting color
-TODO: Improve classification plotting -> Done
-TODO: Give option to select classification color -> Done
 TODO: Add documentation to plot_boxplot()
+TODO: Adjust documentation for plot_classification_accuracy()
 
 """
 import numpy as np