From c9aeb432310105ac48f469b7354434a9c65af0ec Mon Sep 17 00:00:00 2001 From: =?UTF-8?q?K=C3=BChle=2C=20Laura=20Christine=20=28lakue103=29?= <laura.kuehle@uni-duesseldorf.de> Date: Tue, 21 Dec 2021 14:36:09 +0100 Subject: [PATCH] Removed completed TODOs. --- ANN_Training.py | 11 ----------- Plotting.py | 3 +-- 2 files changed, 1 insertion(+), 13 deletions(-) diff --git a/ANN_Training.py b/ANN_Training.py index 892503a..ead8e26 100644 --- a/ANN_Training.py +++ b/ANN_Training.py @@ -2,26 +2,15 @@ """ @author: Laura C. Kühle, Soraya Terrab (sorayaterrab) -TODO: Give option to compare multiple models -> Done -TODO: Add more evaluation measures (AUROC, ROC, F1, training accuracy, boxplot over CVF, etc.) - -> Done TODO: Add log to pipeline TODO: Remove object set-up TODO: Optimize Snakefile-vs-config relation TODO: Improve maximum selection runtime -TODO: Discuss if we want training accuracy/ROC in addition to CFV -> Done (No) -TODO: Discuss whether to change output to binary -> Done (Yes) TODO: Change output to binary TODO: Adapt TCD file to new classification -TODO: Improve classification stat handling -> Done -TODO: Discuss automatic comparison between (non-)normalized data - -> Done (Flag for comparison) TODO: Add flag for evaluation of non-normalized data as well -> Next! TODO: Add evaluation for all classes (recall, precision, fscore) TODO: Add documentation -TODO: Separate model training in Snakefile by using wildcards -> Done -TODO: Correct import statements -> Done (Installed new version) -TODO: Remove unnecessary imports -> Done """ import numpy as np diff --git a/Plotting.py b/Plotting.py index 9542972..a50ba04 100644 --- a/Plotting.py +++ b/Plotting.py @@ -3,9 +3,8 @@ @author: Laura C. Kühle TODO: Give option to select plotting color -TODO: Improve classification plotting -> Done -TODO: Give option to select classification color -> Done TODO: Add documentation to plot_boxplot() +TODO: Adjust documentation for plot_classification_accuracy() """ import numpy as np -- GitLab