diff --git a/ANN_Training.py b/ANN_Training.py index 892503ab42788344824a93fca14e86443e8e5053..ead8e2625114b2612ecbc3ce02dbdfbdf90ed79a 100644 --- a/ANN_Training.py +++ b/ANN_Training.py @@ -2,26 +2,15 @@ """ @author: Laura C. Kühle, Soraya Terrab (sorayaterrab) -TODO: Give option to compare multiple models -> Done -TODO: Add more evaluation measures (AUROC, ROC, F1, training accuracy, boxplot over CVF, etc.) - -> Done TODO: Add log to pipeline TODO: Remove object set-up TODO: Optimize Snakefile-vs-config relation TODO: Improve maximum selection runtime -TODO: Discuss if we want training accuracy/ROC in addition to CFV -> Done (No) -TODO: Discuss whether to change output to binary -> Done (Yes) TODO: Change output to binary TODO: Adapt TCD file to new classification -TODO: Improve classification stat handling -> Done -TODO: Discuss automatic comparison between (non-)normalized data - -> Done (Flag for comparison) TODO: Add flag for evaluation of non-normalized data as well -> Next! TODO: Add evaluation for all classes (recall, precision, fscore) TODO: Add documentation -TODO: Separate model training in Snakefile by using wildcards -> Done -TODO: Correct import statements -> Done (Installed new version) -TODO: Remove unnecessary imports -> Done """ import numpy as np diff --git a/Plotting.py b/Plotting.py index 954297270f55b8d707537258b25e8130b398ef83..a50ba040748db9a68afd2b88763adb55734a51a8 100644 --- a/Plotting.py +++ b/Plotting.py @@ -3,9 +3,8 @@ @author: Laura C. Kühle TODO: Give option to select plotting color -TODO: Improve classification plotting -> Done -TODO: Give option to select classification color -> Done TODO: Add documentation to plot_boxplot() +TODO: Adjust documentation for plot_classification_accuracy() """ import numpy as np