update dependencies and gradlew

build.gradle

@@ -4,7 +4,7 @@ plugins {
 	id 'jacoco'
 	id "maven-publish"
 	id "signing"
-	id "de.undercouch.download" version "5.4.0"
+	id "de.undercouch.download" version "5.6.0"
 }
 
 project.version = '1.1.1-SNAPSHOT'
@@ -26,18 +26,18 @@ configurations.all {
 	resolutionStrategy.cacheChangingModulesFor 0, 'seconds'
 }
 
-def parser_version = '2.12.4'
+def parser_version = '2.13.3'
 
 dependencies {
 	//implementation(group: 'com.microsoft', name: 'tla2tools', version: '1.4.6')
-	implementation(group: 'commons-cli', name: 'commons-cli', version: '1.5.0')
+	implementation(group: 'commons-cli', name: 'commons-cli', version: '1.8.0')
 	implementation(group: 'de.hhu.stups', name: 'tlatools', version: '1.0.2')
 
 	implementation(group: 'de.hhu.stups', name: 'bparser', version: parser_version)
 	implementation(group: 'de.hhu.stups', name: 'ltlparser', version: parser_version)
 
 	testImplementation(group: 'junit', name: 'junit', version: '4.13.2')
-	testImplementation(group: 'de.hhu.stups', name: 'tla2bAST', version: '1.1.5')
+	testImplementation(group: 'de.hhu.stups', name: 'tla2bAST', version: '1.3.0')
 }
 
 java {
@@ -49,7 +49,7 @@ java {
 }
 
 jacoco {
-	toolVersion = "0.8.7"
+	toolVersion = "0.8.12"
 	reportsDirectory = file("$buildDir/JacocoReports")
 }
 

gradle/wrapper/gradle-wrapper.properties

 distributionBase=GRADLE_USER_HOME
 distributionPath=wrapper/dists
-distributionUrl=https\://services.gradle.org/distributions/gradle-8.1.1-bin.zip
+distributionUrl=https\://services.gradle.org/distributions/gradle-8.8-bin.zip
 networkTimeout=10000
 zipStoreBase=GRADLE_USER_HOME
 zipStorePath=wrapper/dists

gradlew

@@ -55,7 +55,7 @@
 #       Darwin, MinGW, and NonStop.
 #
 #   (3) This script is generated from the Groovy template
-#       https://github.com/gradle/gradle/blob/HEAD/subprojects/plugins/src/main/resources/org/gradle/api/internal/plugins/unixStartScript.txt
+#       https://github.com/gradle/gradle/blob/HEAD/platforms/jvm/plugins-application/src/main/resources/org/gradle/api/internal/plugins/unixStartScript.txt
 #       within the Gradle project.
 #
 #       You can find Gradle at https://github.com/gradle/gradle/.
@@ -83,7 +83,8 @@ done
 # This is normally unused
 # shellcheck disable=SC2034
 APP_BASE_NAME=${0##*/}
-APP_HOME=$( cd "${APP_HOME:-./}" && pwd -P ) || exit
+# Discard cd standard output in case $CDPATH is set (https://github.com/gradle/gradle/issues/25036)
+APP_HOME=$( cd "${APP_HOME:-./}" > /dev/null && pwd -P ) || exit
 
 # Use the maximum available, or set MAX_FD != -1 to use that value.
 MAX_FD=maximum
@@ -130,18 +131,21 @@ location of your Java installation."
     fi
 else
     JAVACMD=java
-    which java >/dev/null 2>&1 || die "ERROR: JAVA_HOME is not set and no 'java' command could be found in your PATH.
+    if ! command -v java >/dev/null 2>&1
+    then
+        die "ERROR: JAVA_HOME is not set and no 'java' command could be found in your PATH.
 
 Please set the JAVA_HOME variable in your environment to match the
 location of your Java installation."
     fi
+fi
 
 # Increase the maximum file descriptors if we can.
 if ! "$cygwin" && ! "$darwin" && ! "$nonstop" ; then
     case $MAX_FD in #(
       max*)
         # In POSIX sh, ulimit -H is undefined. That's why the result is checked to see if it worked.
-        # shellcheck disable=SC3045
+        # shellcheck disable=SC2039,SC3045
         MAX_FD=$( ulimit -H -n ) ||
             warn "Could not query maximum file descriptor limit"
     esac
@@ -149,7 +153,7 @@ if ! "$cygwin" && ! "$darwin" && ! "$nonstop" ; then
       '' | soft) :;; #(
       *)
         # In POSIX sh, ulimit -n is undefined. That's why the result is checked to see if it worked.
-        # shellcheck disable=SC3045
+        # shellcheck disable=SC2039,SC3045
         ulimit -n "$MAX_FD" ||
             warn "Could not set maximum file descriptor limit to $MAX_FD"
     esac
@@ -198,11 +202,11 @@ fi
 # Add default JVM options here. You can also use JAVA_OPTS and GRADLE_OPTS to pass JVM options to this script.
 DEFAULT_JVM_OPTS='"-Xmx64m" "-Xms64m"'
 
-# Collect all arguments for the java command;
-#   * $DEFAULT_JVM_OPTS, $JAVA_OPTS, and $GRADLE_OPTS can contain fragments of
-#     shell script including quotes and variable substitutions, so put them in
-#     double quotes to make sure that they get re-expanded; and
-#   * put everything else in single quotes, so that it's not re-expanded.
+# Collect all arguments for the java command:
+#   * DEFAULT_JVM_OPTS, JAVA_OPTS, JAVA_OPTS, and optsEnvironmentVar are not allowed to contain shell fragments,
+#     and any embedded shellness will be escaped.
+#   * For example: A user cannot expect ${Hostname} to be expanded, as it is an environment variable and will be
+#     treated as '${Hostname}' itself on the command line.
 
 set -- \
         "-Dorg.gradle.appname=$APP_BASE_NAME" \