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Commit a1717cb4 authored by Claus Jonathan Fritzemeier's avatar Claus Jonathan Fritzemeier
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DESCRIPTION
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Package: sybilSBML Package: sybilSBML
Type: Package Type: Package
Title: SBML Integration in Package sybil Title: SBML Integration in Package Sybil
Version: 2.0.8 Version: 2.0.9
Date: 2014-05-21 Date: 2015-07-03
Authors@R: c(person("Gabriel", "Gelius-Dietrich", role = c("aut", "cre"), email = "geliudie@uni-duesseldorf.de"), Authors@R: c(person(c("C.", "Jonathan"), "Fritzemeier", role = c("cre", "ctb"), email = "clausjonathan.fritzemeier@uni-duesseldorf.de"),
person("Gabriel", "Gelius-Dietrich", role = c("aut")),
person("Deya", "Alzoubi", role = "ctb")) person("Deya", "Alzoubi", role = "ctb"))
Maintainer: Gabriel Gelius-Dietrich <geliudie@uni-duesseldorf.de> Maintainer: Gabriel Gelius-Dietrich <geliudie@uni-duesseldorf.de>
Depends: R (>= 2.14.2), Matrix, sybil (>= 1.2.4) Depends: R (>= 2.14.2), Matrix, sybil (>= 1.2.4)
Imports: methods Imports: methods
Description: SBML (Systems Biology Markup Language) integration in sybil Description: SBML (Systems Biology Markup Language) integration in sybil. Many constraint based metabolic models are published in SBML format (*.xml). Herewith is the ability to read and check SBML files in sybil provided.
License: GPL-3 License: GPL-3 | file LICENSE
LazyLoad: yes LazyLoad: yes
Collate: generics.R sbmlPtrClass.R sbmlErrorClass.R sybilSBML.R Collate: generics.R sbmlPtrClass.R sbmlErrorClass.R sybilSBML.R
uglyHack.R readSBMLmod.R zzz.R uglyHack.R readSBMLmod.R zzz.R
Packaged: 2014-05-21 07:11:55 UTC; gabriel Packaged: 2014-05-21 07:11:55 UTC; gabriel
Author: Gabriel Gelius-Dietrich [aut, cre], Author: C. Jonathan Fritzemeier [cre, ctb],
Gabriel Gelius-Dietrich [aut],
Deya Alzoubi [ctb] Deya Alzoubi [ctb]
NeedsCompilation: yes NeedsCompilation: yes
Repository: CRAN Repository: CRAN
Date/Publication: 2014-05-21 10:15:25
inst/NEWS.Rd
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...@@ -6,6 +6,13 @@ ...@@ -6,6 +6,13 @@
\newcommand{\CRANpkg}{\href{http://CRAN.R-project.org/package=#1}{\pkg{#1}}} \newcommand{\CRANpkg}{\href{http://CRAN.R-project.org/package=#1}{\pkg{#1}}}
% ---------------------------------------------------------------------------- %
\section{Changes in version 2.0.9 2015-07-03}{
\itemize{
\item Changed Maintainer.
}
}
% ---------------------------------------------------------------------------- % % ---------------------------------------------------------------------------- %
\section{Changes in version 2.0.8 2014-05-21}{ \section{Changes in version 2.0.8 2014-05-21}{
\itemize{ \itemize{
......
man/closeSBMLfile.Rd
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880--881. 880--881.
} }
\author{Gabriel Gelius-Dietrich} \author{
Gabriel Gelius-Dietrich <geliudie@uni-duesseldorf.de>
Maintainer: Claus Jonathan Fritzemeier <clausjonathan.fritzemeier@uni-duesseldorf.de>
}
\seealso{ \seealso{
\code{\link{openSBMLfile}}, \code{\linkS4class{sbmlPtr}} \code{\link{openSBMLfile}}, \code{\linkS4class{sbmlPtr}}
......
man/delSBMLmodel.Rd
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880--881. 880--881.
} }
\author{Gabriel Gelius-Dietrich} \author{
Gabriel Gelius-Dietrich <geliudie@uni-duesseldorf.de>
Maintainer: Claus Jonathan Fritzemeier <clausjonathan.fritzemeier@uni-duesseldorf.de>
}
\seealso{ \seealso{
\code{\link{getSBMLmodel}}, \code{\linkS4class{sbmlPtr}} \code{\link{getSBMLmodel}}, \code{\linkS4class{sbmlPtr}}
......
man/getSBMLCompartList.Rd
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880--881. 880--881.
} }
\author{Gabriel Gelius-Dietrich} \author{
Gabriel Gelius-Dietrich <geliudie@uni-duesseldorf.de>
Maintainer: Claus Jonathan Fritzemeier <clausjonathan.fritzemeier@uni-duesseldorf.de>
}
\seealso{ \seealso{
\code{\link{getSBMLmodel}}, \code{\linkS4class{sbmlPtr}} \code{\link{getSBMLmodel}}, \code{\linkS4class{sbmlPtr}}
......
man/getSBMLReactionsList.Rd
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...@@ -120,7 +120,12 @@ ...@@ -120,7 +120,12 @@
880--881. 880--881.
} }
\author{Gabriel Gelius-Dietrich} \author{
Gabriel Gelius-Dietrich <geliudie@uni-duesseldorf.de>
Maintainer: Claus Jonathan Fritzemeier <clausjonathan.fritzemeier@uni-duesseldorf.de>
}
\seealso{ \seealso{
\code{\link{getSBMLmodel}}, \code{\linkS4class{sbmlPtr}} \code{\link{getSBMLmodel}}, \code{\linkS4class{sbmlPtr}}
......
man/getSBMLSpeciesList.Rd
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880--881. 880--881.
} }
\author{Gabriel Gelius-Dietrich} \author{
Gabriel Gelius-Dietrich <geliudie@uni-duesseldorf.de>
Maintainer: Claus Jonathan Fritzemeier <clausjonathan.fritzemeier@uni-duesseldorf.de>
}
\seealso{ \seealso{
\code{\link{getSBMLmodel}}, \code{\linkS4class{sbmlPtr}} \code{\link{getSBMLmodel}}, \code{\linkS4class{sbmlPtr}}
......
man/getSBMLerrors.Rd
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...@@ -60,7 +60,12 @@ ...@@ -60,7 +60,12 @@
880--881. 880--881.
} }
\author{Gabriel Gelius-Dietrich} \author{
Gabriel Gelius-Dietrich <geliudie@uni-duesseldorf.de>
Maintainer: Claus Jonathan Fritzemeier <clausjonathan.fritzemeier@uni-duesseldorf.de>
}
\seealso{ \seealso{
\code{\link{openSBMLfile}}, \code{\link{validateSBMLdocument}}, \code{\link{openSBMLfile}}, \code{\link{validateSBMLdocument}},
......
man/getSBMLlevel.Rd
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...@@ -28,7 +28,12 @@ ...@@ -28,7 +28,12 @@
880--881. 880--881.
} }
\author{Gabriel Gelius-Dietrich} \author{
Gabriel Gelius-Dietrich <geliudie@uni-duesseldorf.de>
Maintainer: Claus Jonathan Fritzemeier <clausjonathan.fritzemeier@uni-duesseldorf.de>
}
\seealso{ \seealso{
\code{\link{openSBMLfile}}, \code{\linkS4class{sbmlPtr}} \code{\link{openSBMLfile}}, \code{\linkS4class{sbmlPtr}}
......
man/getSBMLmodId.Rd
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...@@ -30,7 +30,12 @@ ...@@ -30,7 +30,12 @@
880--881. 880--881.
} }
\author{Gabriel Gelius-Dietrich} \author{
Gabriel Gelius-Dietrich <geliudie@uni-duesseldorf.de>
Maintainer: Claus Jonathan Fritzemeier <clausjonathan.fritzemeier@uni-duesseldorf.de>
}
\seealso{ \seealso{
\code{\link{getSBMLmodel}}, \code{\linkS4class{sbmlPtr}} \code{\link{getSBMLmodel}}, \code{\linkS4class{sbmlPtr}}
......
man/getSBMLmodName.Rd
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880--881. 880--881.
} }
\author{Gabriel Gelius-Dietrich} \author{
Gabriel Gelius-Dietrich <geliudie@uni-duesseldorf.de>
Maintainer: Claus Jonathan Fritzemeier <clausjonathan.fritzemeier@uni-duesseldorf.de>
}
\seealso{ \seealso{
\code{\link{getSBMLmodel}}, \code{\linkS4class{sbmlPtr}} \code{\link{getSBMLmodel}}, \code{\linkS4class{sbmlPtr}}
......
man/getSBMLmodel.Rd
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...@@ -31,7 +31,12 @@ ...@@ -31,7 +31,12 @@
880--881. 880--881.
} }
\author{Gabriel Gelius-Dietrich} \author{
Gabriel Gelius-Dietrich <geliudie@uni-duesseldorf.de>
Maintainer: Claus Jonathan Fritzemeier <clausjonathan.fritzemeier@uni-duesseldorf.de>
}
\seealso{ \seealso{
\code{\link{openSBMLfile}}, \code{\linkS4class{sbmlPtr}} \code{\link{openSBMLfile}}, \code{\linkS4class{sbmlPtr}}
......
man/getSBMLnumCompart.Rd
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...@@ -30,7 +30,12 @@ ...@@ -30,7 +30,12 @@
880--881. 880--881.
} }
\author{Gabriel Gelius-Dietrich} \author{
Gabriel Gelius-Dietrich <geliudie@uni-duesseldorf.de>
Maintainer: Claus Jonathan Fritzemeier <clausjonathan.fritzemeier@uni-duesseldorf.de>
}
\seealso{ \seealso{
\code{\link{getSBMLmodel}}, \code{\linkS4class{sbmlPtr}} \code{\link{getSBMLmodel}}, \code{\linkS4class{sbmlPtr}}
......
man/getSBMLnumReactions.Rd
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...@@ -30,7 +30,12 @@ ...@@ -30,7 +30,12 @@
880--881. 880--881.
} }
\author{Gabriel Gelius-Dietrich} \author{
Gabriel Gelius-Dietrich <geliudie@uni-duesseldorf.de>
Maintainer: Claus Jonathan Fritzemeier <clausjonathan.fritzemeier@uni-duesseldorf.de>
}
\seealso{ \seealso{
\code{\link{getSBMLmodel}}, \code{\linkS4class{sbmlPtr}} \code{\link{getSBMLmodel}}, \code{\linkS4class{sbmlPtr}}
......
man/getSBMLnumSpecies.Rd
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...@@ -30,7 +30,12 @@ ...@@ -30,7 +30,12 @@
880--881. 880--881.
} }
\author{Gabriel Gelius-Dietrich} \author{
Gabriel Gelius-Dietrich <geliudie@uni-duesseldorf.de>
Maintainer: Claus Jonathan Fritzemeier <clausjonathan.fritzemeier@uni-duesseldorf.de>
}
\seealso{ \seealso{
\code{\link{getSBMLmodel}}, \code{\linkS4class{sbmlPtr}} \code{\link{getSBMLmodel}}, \code{\linkS4class{sbmlPtr}}
......
man/getSBMLunitDefinitionsList.Rd
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...@@ -61,7 +61,12 @@ ...@@ -61,7 +61,12 @@
880--881. 880--881.
} }
\author{Gabriel Gelius-Dietrich} \author{
Gabriel Gelius-Dietrich <geliudie@uni-duesseldorf.de>
Maintainer: Claus Jonathan Fritzemeier <clausjonathan.fritzemeier@uni-duesseldorf.de>
}
\seealso{ \seealso{
\code{\link{getSBMLmodel}}, \code{\linkS4class{sbmlPtr}} \code{\link{getSBMLmodel}}, \code{\linkS4class{sbmlPtr}}
......
man/getSBMLversion.Rd
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...@@ -30,7 +30,12 @@ ...@@ -30,7 +30,12 @@
880--881. 880--881.
} }
\author{Gabriel Gelius-Dietrich} \author{
Gabriel Gelius-Dietrich <geliudie@uni-duesseldorf.de>
Maintainer: Claus Jonathan Fritzemeier <clausjonathan.fritzemeier@uni-duesseldorf.de>
}
\seealso{ \seealso{
\code{\link{openSBMLfile}}, \code{\linkS4class{sbmlPtr}} \code{\link{openSBMLfile}}, \code{\linkS4class{sbmlPtr}}
......
man/openSBMLfile.Rd
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...@@ -32,7 +32,12 @@ ...@@ -32,7 +32,12 @@
880--881. 880--881.
} }
\author{Gabriel Gelius-Dietrich} \author{
Gabriel Gelius-Dietrich <geliudie@uni-duesseldorf.de>
Maintainer: Claus Jonathan Fritzemeier <clausjonathan.fritzemeier@uni-duesseldorf.de>
}
\seealso{ \seealso{
\code{\link{closeSBMLfile}}, \code{\linkS4class{sbmlPtr}} \code{\link{closeSBMLfile}}, \code{\linkS4class{sbmlPtr}}
......
man/readSBMLmod.Rd
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...@@ -192,9 +192,12 @@ ...@@ -192,9 +192,12 @@
} }
\author{ \author{
Gabriel Gelius-Dietrich Gabriel Gelius-Dietrich <geliudie@uni-duesseldorf.de>
Maintainer: Claus Jonathan Fritzemeier <clausjonathan.fritzemeier@uni-duesseldorf.de>
} }
\note{ \note{
The function \code{readSBMLmod} makes use of the library The function \code{readSBMLmod} makes use of the library
\code{libSBML} (\url{http://www.sbml.org}). \code{libSBML} (\url{http://www.sbml.org}).
......
man/sbmlError-class.Rd
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...@@ -106,7 +106,12 @@ ...@@ -106,7 +106,12 @@
} }
} }
\author{Gabriel Gelius-Dietrich} \author{
Gabriel Gelius-Dietrich <geliudie@uni-duesseldorf.de>
Maintainer: Claus Jonathan Fritzemeier <clausjonathan.fritzemeier@uni-duesseldorf.de>
}
\seealso{ \seealso{
\code{\link{validateSBMLdocument}}, \code{\link{getSBMLerrors}} \code{\link{validateSBMLdocument}}, \code{\link{getSBMLerrors}}
......
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