From a1717cb4697e8526c17332efda062f84532b7958 Mon Sep 17 00:00:00 2001 From: Claus Jonathan Fritzemeier <clausjonathan.fritzemeier@hhu.de> Date: Fri, 3 Jul 2015 14:19:01 +0200 Subject: [PATCH] changed maintainer --- DESCRIPTION | 17 +++++++++-------- inst/NEWS.Rd | 7 +++++++ man/closeSBMLfile.Rd | 7 ++++++- man/delSBMLmodel.Rd | 7 ++++++- man/getSBMLCompartList.Rd | 7 ++++++- man/getSBMLReactionsList.Rd | 7 ++++++- man/getSBMLSpeciesList.Rd | 7 ++++++- man/getSBMLerrors.Rd | 7 ++++++- man/getSBMLlevel.Rd | 7 ++++++- man/getSBMLmodId.Rd | 7 ++++++- man/getSBMLmodName.Rd | 7 ++++++- man/getSBMLmodel.Rd | 7 ++++++- man/getSBMLnumCompart.Rd | 7 ++++++- man/getSBMLnumReactions.Rd | 7 ++++++- man/getSBMLnumSpecies.Rd | 7 ++++++- man/getSBMLunitDefinitionsList.Rd | 7 ++++++- man/getSBMLversion.Rd | 7 ++++++- man/openSBMLfile.Rd | 7 ++++++- man/readSBMLmod.Rd | 5 ++++- man/sbmlError-class.Rd | 7 ++++++- man/sbmlPtr-class.Rd | 7 ++++++- man/validateSBMLdocument.Rd | 7 ++++++- man/versionLibSBML.Rd | 7 ++++++- 23 files changed, 140 insertions(+), 29 deletions(-) diff --git a/DESCRIPTION b/DESCRIPTION index 92cddf1..be7ca6b 100644 --- a/DESCRIPTION +++ b/DESCRIPTION @@ -1,21 +1,22 @@ Package: sybilSBML Type: Package -Title: SBML Integration in Package sybil -Version: 2.0.8 -Date: 2014-05-21 -Authors@R: c(person("Gabriel", "Gelius-Dietrich", role = c("aut", "cre"), email = "geliudie@uni-duesseldorf.de"), +Title: SBML Integration in Package Sybil +Version: 2.0.9 +Date: 2015-07-03 +Authors@R: c(person(c("C.", "Jonathan"), "Fritzemeier", role = c("cre", "ctb"), email = "clausjonathan.fritzemeier@uni-duesseldorf.de"), + person("Gabriel", "Gelius-Dietrich", role = c("aut")), person("Deya", "Alzoubi", role = "ctb")) Maintainer: Gabriel Gelius-Dietrich <geliudie@uni-duesseldorf.de> Depends: R (>= 2.14.2), Matrix, sybil (>= 1.2.4) Imports: methods -Description: SBML (Systems Biology Markup Language) integration in sybil -License: GPL-3 +Description: SBML (Systems Biology Markup Language) integration in sybil. Many constraint based metabolic models are published in SBML format (*.xml). Herewith is the ability to read and check SBML files in sybil provided. +License: GPL-3 | file LICENSE LazyLoad: yes Collate: generics.R sbmlPtrClass.R sbmlErrorClass.R sybilSBML.R uglyHack.R readSBMLmod.R zzz.R Packaged: 2014-05-21 07:11:55 UTC; gabriel -Author: Gabriel Gelius-Dietrich [aut, cre], +Author: C. Jonathan Fritzemeier [cre, ctb], + Gabriel Gelius-Dietrich [aut], Deya Alzoubi [ctb] NeedsCompilation: yes Repository: CRAN -Date/Publication: 2014-05-21 10:15:25 diff --git a/inst/NEWS.Rd b/inst/NEWS.Rd index cb95f8e..719fe82 100644 --- a/inst/NEWS.Rd +++ b/inst/NEWS.Rd @@ -6,6 +6,13 @@ \newcommand{\CRANpkg}{\href{http://CRAN.R-project.org/package=#1}{\pkg{#1}}} +% ---------------------------------------------------------------------------- % +\section{Changes in version 2.0.9 2015-07-03}{ + \itemize{ + \item Changed Maintainer. + } +} + % ---------------------------------------------------------------------------- % \section{Changes in version 2.0.8 2014-05-21}{ \itemize{ diff --git a/man/closeSBMLfile.Rd b/man/closeSBMLfile.Rd index a2364ad..9de05da 100644 --- a/man/closeSBMLfile.Rd +++ b/man/closeSBMLfile.Rd @@ -30,7 +30,12 @@ 880--881. } -\author{Gabriel Gelius-Dietrich} +\author{ + Gabriel Gelius-Dietrich <geliudie@uni-duesseldorf.de> + + Maintainer: Claus Jonathan Fritzemeier <clausjonathan.fritzemeier@uni-duesseldorf.de> +} + \seealso{ \code{\link{openSBMLfile}}, \code{\linkS4class{sbmlPtr}} diff --git a/man/delSBMLmodel.Rd b/man/delSBMLmodel.Rd index b65ff86..1bc65b4 100644 --- a/man/delSBMLmodel.Rd +++ b/man/delSBMLmodel.Rd @@ -30,7 +30,12 @@ 880--881. } -\author{Gabriel Gelius-Dietrich} +\author{ + Gabriel Gelius-Dietrich <geliudie@uni-duesseldorf.de> + + Maintainer: Claus Jonathan Fritzemeier <clausjonathan.fritzemeier@uni-duesseldorf.de> +} + \seealso{ \code{\link{getSBMLmodel}}, \code{\linkS4class{sbmlPtr}} diff --git a/man/getSBMLCompartList.Rd b/man/getSBMLCompartList.Rd index 37e9cdb..a1f30a8 100644 --- a/man/getSBMLCompartList.Rd +++ b/man/getSBMLCompartList.Rd @@ -46,7 +46,12 @@ 880--881. } -\author{Gabriel Gelius-Dietrich} +\author{ + Gabriel Gelius-Dietrich <geliudie@uni-duesseldorf.de> + + Maintainer: Claus Jonathan Fritzemeier <clausjonathan.fritzemeier@uni-duesseldorf.de> +} + \seealso{ \code{\link{getSBMLmodel}}, \code{\linkS4class{sbmlPtr}} diff --git a/man/getSBMLReactionsList.Rd b/man/getSBMLReactionsList.Rd index 83dccf5..a8bcc58 100644 --- a/man/getSBMLReactionsList.Rd +++ b/man/getSBMLReactionsList.Rd @@ -120,7 +120,12 @@ 880--881. } -\author{Gabriel Gelius-Dietrich} +\author{ + Gabriel Gelius-Dietrich <geliudie@uni-duesseldorf.de> + + Maintainer: Claus Jonathan Fritzemeier <clausjonathan.fritzemeier@uni-duesseldorf.de> +} + \seealso{ \code{\link{getSBMLmodel}}, \code{\linkS4class{sbmlPtr}} diff --git a/man/getSBMLSpeciesList.Rd b/man/getSBMLSpeciesList.Rd index cd76137..82e54d9 100644 --- a/man/getSBMLSpeciesList.Rd +++ b/man/getSBMLSpeciesList.Rd @@ -55,7 +55,12 @@ 880--881. } -\author{Gabriel Gelius-Dietrich} +\author{ + Gabriel Gelius-Dietrich <geliudie@uni-duesseldorf.de> + + Maintainer: Claus Jonathan Fritzemeier <clausjonathan.fritzemeier@uni-duesseldorf.de> +} + \seealso{ \code{\link{getSBMLmodel}}, \code{\linkS4class{sbmlPtr}} diff --git a/man/getSBMLerrors.Rd b/man/getSBMLerrors.Rd index daff21c..458d0dc 100644 --- a/man/getSBMLerrors.Rd +++ b/man/getSBMLerrors.Rd @@ -60,7 +60,12 @@ 880--881. } -\author{Gabriel Gelius-Dietrich} +\author{ + Gabriel Gelius-Dietrich <geliudie@uni-duesseldorf.de> + + Maintainer: Claus Jonathan Fritzemeier <clausjonathan.fritzemeier@uni-duesseldorf.de> +} + \seealso{ \code{\link{openSBMLfile}}, \code{\link{validateSBMLdocument}}, diff --git a/man/getSBMLlevel.Rd b/man/getSBMLlevel.Rd index c9d212c..12364e2 100644 --- a/man/getSBMLlevel.Rd +++ b/man/getSBMLlevel.Rd @@ -28,7 +28,12 @@ 880--881. } -\author{Gabriel Gelius-Dietrich} +\author{ + Gabriel Gelius-Dietrich <geliudie@uni-duesseldorf.de> + + Maintainer: Claus Jonathan Fritzemeier <clausjonathan.fritzemeier@uni-duesseldorf.de> +} + \seealso{ \code{\link{openSBMLfile}}, \code{\linkS4class{sbmlPtr}} diff --git a/man/getSBMLmodId.Rd b/man/getSBMLmodId.Rd index f6dd225..cae6da3 100644 --- a/man/getSBMLmodId.Rd +++ b/man/getSBMLmodId.Rd @@ -30,7 +30,12 @@ 880--881. } -\author{Gabriel Gelius-Dietrich} +\author{ + Gabriel Gelius-Dietrich <geliudie@uni-duesseldorf.de> + + Maintainer: Claus Jonathan Fritzemeier <clausjonathan.fritzemeier@uni-duesseldorf.de> +} + \seealso{ \code{\link{getSBMLmodel}}, \code{\linkS4class{sbmlPtr}} diff --git a/man/getSBMLmodName.Rd b/man/getSBMLmodName.Rd index 8065871..1f1bfd6 100644 --- a/man/getSBMLmodName.Rd +++ b/man/getSBMLmodName.Rd @@ -30,7 +30,12 @@ 880--881. } -\author{Gabriel Gelius-Dietrich} +\author{ + Gabriel Gelius-Dietrich <geliudie@uni-duesseldorf.de> + + Maintainer: Claus Jonathan Fritzemeier <clausjonathan.fritzemeier@uni-duesseldorf.de> +} + \seealso{ \code{\link{getSBMLmodel}}, \code{\linkS4class{sbmlPtr}} diff --git a/man/getSBMLmodel.Rd b/man/getSBMLmodel.Rd index b623a7c..1440250 100644 --- a/man/getSBMLmodel.Rd +++ b/man/getSBMLmodel.Rd @@ -31,7 +31,12 @@ 880--881. } -\author{Gabriel Gelius-Dietrich} +\author{ + Gabriel Gelius-Dietrich <geliudie@uni-duesseldorf.de> + + Maintainer: Claus Jonathan Fritzemeier <clausjonathan.fritzemeier@uni-duesseldorf.de> +} + \seealso{ \code{\link{openSBMLfile}}, \code{\linkS4class{sbmlPtr}} diff --git a/man/getSBMLnumCompart.Rd b/man/getSBMLnumCompart.Rd index 931438b..3895390 100644 --- a/man/getSBMLnumCompart.Rd +++ b/man/getSBMLnumCompart.Rd @@ -30,7 +30,12 @@ 880--881. } -\author{Gabriel Gelius-Dietrich} +\author{ + Gabriel Gelius-Dietrich <geliudie@uni-duesseldorf.de> + + Maintainer: Claus Jonathan Fritzemeier <clausjonathan.fritzemeier@uni-duesseldorf.de> +} + \seealso{ \code{\link{getSBMLmodel}}, \code{\linkS4class{sbmlPtr}} diff --git a/man/getSBMLnumReactions.Rd b/man/getSBMLnumReactions.Rd index 9dfd5a5..71917e7 100644 --- a/man/getSBMLnumReactions.Rd +++ b/man/getSBMLnumReactions.Rd @@ -30,7 +30,12 @@ 880--881. } -\author{Gabriel Gelius-Dietrich} +\author{ + Gabriel Gelius-Dietrich <geliudie@uni-duesseldorf.de> + + Maintainer: Claus Jonathan Fritzemeier <clausjonathan.fritzemeier@uni-duesseldorf.de> +} + \seealso{ \code{\link{getSBMLmodel}}, \code{\linkS4class{sbmlPtr}} diff --git a/man/getSBMLnumSpecies.Rd b/man/getSBMLnumSpecies.Rd index f46cb26..e627f18 100644 --- a/man/getSBMLnumSpecies.Rd +++ b/man/getSBMLnumSpecies.Rd @@ -30,7 +30,12 @@ 880--881. } -\author{Gabriel Gelius-Dietrich} +\author{ + Gabriel Gelius-Dietrich <geliudie@uni-duesseldorf.de> + + Maintainer: Claus Jonathan Fritzemeier <clausjonathan.fritzemeier@uni-duesseldorf.de> +} + \seealso{ \code{\link{getSBMLmodel}}, \code{\linkS4class{sbmlPtr}} diff --git a/man/getSBMLunitDefinitionsList.Rd b/man/getSBMLunitDefinitionsList.Rd index 285426a..3f81c32 100644 --- a/man/getSBMLunitDefinitionsList.Rd +++ b/man/getSBMLunitDefinitionsList.Rd @@ -61,7 +61,12 @@ 880--881. } -\author{Gabriel Gelius-Dietrich} +\author{ + Gabriel Gelius-Dietrich <geliudie@uni-duesseldorf.de> + + Maintainer: Claus Jonathan Fritzemeier <clausjonathan.fritzemeier@uni-duesseldorf.de> +} + \seealso{ \code{\link{getSBMLmodel}}, \code{\linkS4class{sbmlPtr}} diff --git a/man/getSBMLversion.Rd b/man/getSBMLversion.Rd index 13c7467..5bc5cd6 100644 --- a/man/getSBMLversion.Rd +++ b/man/getSBMLversion.Rd @@ -30,7 +30,12 @@ 880--881. } -\author{Gabriel Gelius-Dietrich} +\author{ + Gabriel Gelius-Dietrich <geliudie@uni-duesseldorf.de> + + Maintainer: Claus Jonathan Fritzemeier <clausjonathan.fritzemeier@uni-duesseldorf.de> +} + \seealso{ \code{\link{openSBMLfile}}, \code{\linkS4class{sbmlPtr}} diff --git a/man/openSBMLfile.Rd b/man/openSBMLfile.Rd index 194554f..d9196ef 100644 --- a/man/openSBMLfile.Rd +++ b/man/openSBMLfile.Rd @@ -32,7 +32,12 @@ 880--881. } -\author{Gabriel Gelius-Dietrich} +\author{ + Gabriel Gelius-Dietrich <geliudie@uni-duesseldorf.de> + + Maintainer: Claus Jonathan Fritzemeier <clausjonathan.fritzemeier@uni-duesseldorf.de> +} + \seealso{ \code{\link{closeSBMLfile}}, \code{\linkS4class{sbmlPtr}} diff --git a/man/readSBMLmod.Rd b/man/readSBMLmod.Rd index 209d9f4..5272130 100644 --- a/man/readSBMLmod.Rd +++ b/man/readSBMLmod.Rd @@ -192,9 +192,12 @@ } \author{ - Gabriel Gelius-Dietrich + Gabriel Gelius-Dietrich <geliudie@uni-duesseldorf.de> + + Maintainer: Claus Jonathan Fritzemeier <clausjonathan.fritzemeier@uni-duesseldorf.de> } + \note{ The function \code{readSBMLmod} makes use of the library \code{libSBML} (\url{http://www.sbml.org}). diff --git a/man/sbmlError-class.Rd b/man/sbmlError-class.Rd index 1406da7..63c626e 100644 --- a/man/sbmlError-class.Rd +++ b/man/sbmlError-class.Rd @@ -106,7 +106,12 @@ } } -\author{Gabriel Gelius-Dietrich} +\author{ + Gabriel Gelius-Dietrich <geliudie@uni-duesseldorf.de> + + Maintainer: Claus Jonathan Fritzemeier <clausjonathan.fritzemeier@uni-duesseldorf.de> +} + \seealso{ \code{\link{validateSBMLdocument}}, \code{\link{getSBMLerrors}} diff --git a/man/sbmlPtr-class.Rd b/man/sbmlPtr-class.Rd index bc8c2c4..9ad6e13 100644 --- a/man/sbmlPtr-class.Rd +++ b/man/sbmlPtr-class.Rd @@ -103,7 +103,12 @@ } } -\author{Gabriel Gelius-Dietrich} +\author{ + Gabriel Gelius-Dietrich <geliudie@uni-duesseldorf.de> + + Maintainer: Claus Jonathan Fritzemeier <clausjonathan.fritzemeier@uni-duesseldorf.de> +} + \seealso{ \code{\link{openSBMLfile}}, \code{\link{getSBMLmodel}} diff --git a/man/validateSBMLdocument.Rd b/man/validateSBMLdocument.Rd index e447583..6cb680e 100644 --- a/man/validateSBMLdocument.Rd +++ b/man/validateSBMLdocument.Rd @@ -49,7 +49,12 @@ 880--881. } -\author{Gabriel Gelius-Dietrich} +\author{ + Gabriel Gelius-Dietrich <geliudie@uni-duesseldorf.de> + + Maintainer: Claus Jonathan Fritzemeier <clausjonathan.fritzemeier@uni-duesseldorf.de> +} + \seealso{ \code{\link{readSBMLmod}}, \code{\link{openSBMLfile}}, diff --git a/man/versionLibSBML.Rd b/man/versionLibSBML.Rd index 2b7b7c3..0abdf7d 100644 --- a/man/versionLibSBML.Rd +++ b/man/versionLibSBML.Rd @@ -24,6 +24,11 @@ 880--881. } -\author{Gabriel Gelius-Dietrich} +\author{ + Gabriel Gelius-Dietrich <geliudie@uni-duesseldorf.de> + + Maintainer: Claus Jonathan Fritzemeier <clausjonathan.fritzemeier@uni-duesseldorf.de> +} + \keyword{ IO } -- GitLab