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Comparative Study of HGT Inference Methods
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388b938c

Commit 388b938c authored 1 week ago by Swastik Mishra

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correct paths etc and include detail of GLOOME MP run instructions

parent 20092aea

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01-prepare_data/01-01-prepare_NOG_dataset_dload_seqs.ipynb 93 additions, 127 deletions

01-prepare_data/01-01-prepare_NOG_dataset_dload_seqs.ipynb
01-prepare_data/01-02-prepare_nucleotide_data.ipynb 6 additions, 6 deletions

01-prepare_data/01-02-prepare_nucleotide_data.ipynb
01-prepare_data/src/run_MAD_on_EggNOG_parallel.py 52 additions, 43 deletions

01-prepare_data/src/run_MAD_on_EggNOG_parallel.py
02-run_programs/02-run_programs.ipynb 110 additions, 17 deletions

02-run_programs/02-run_programs.ipynb
02-run_programs/src/run_ALE.py 4 additions, 4 deletions

02-run_programs/src/run_ALE.py

with 265 additions and 197 deletions

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