Discover projects, groups and snippets. Share your projects with others
Reduce a metabolic network (SBML fbc coded model) as per Network Reducer method implemented in MATLAB tool CellNetAnalzyser.
Unofficial implementation of the HHU slide deck in the corporate design
portal in LaTeX.
The ProB Model Checker and Animator Plugin for Rodin
A ready-to-use environment for experimenting with Balanced Growth Optimizer
A Python tool that reads metabolic networks and the corresponding kinetics from SBML format and produces model objects that can be used with Pyomo.
Public codebase for "LAVA: Latent Action Spaces via Variational Auto-encoding for Dialogue Policy Optimization" published in COLING 2020.
Public Jupyter teaching notebooks for use with the ProB kernel for Jupyter.
Description: Python package sbmlxdf. Converts between SBML (.xml) and Pandas dataframes, Excel spreadsheets (.xlsx), *.csv. SBML model creation, modification, validation and access.