aesthetic changes

src/main/java/de/hhu/ba/yoshikoWrapper/help/HelpLinks.java

@@ -27,7 +27,8 @@ public final class HelpLinks {
 
 	public static final HashMap<String,Object> mainInfo = new HashMap<String,Object>();
 	static {
-		mainInfo.put("url", "https://spqrph.github.io/cytoscape-tutorials/presentations/yoshiko.html#/title");
+		mainInfo.put("url", "file:///home/philipp/workspace/cs/cytoscape-tutorials/presentations/yoshiko.html");
+		//mainInfo.put("url", "https://spqrph.github.io/cytoscape-tutorials/presentations/yoshiko.html#/title");
 	}
 
 }

src/main/java/de/hhu/ba/yoshikoWrapper/swing/components/ClusterCountChooser.java

@@ -21,6 +21,7 @@
  ******************************************************************************/
 package de.hhu.ba.yoshikoWrapper.swing.components;
 
+import javax.swing.BoxLayout;
 import javax.swing.JLabel;
 import javax.swing.JPanel;
 
@@ -37,7 +38,11 @@ public class ClusterCountChooser extends JPanel {
 		numSolutionsSetter = new IntegerInputField(1,Integer.MAX_VALUE);
 		numSolutionsSetter.setValue(2);
 		label = new JLabel(LocalizationManager.get("nrClusters"));
+		
 		SwingUtil.addAll(this,label, numSolutionsSetter);
+		
+		BoxLayout layout = new BoxLayout(this, BoxLayout.LINE_AXIS);
+		this.setLayout(layout);
 	}
 
 	@Override

src/main/java/de/hhu/ba/yoshikoWrapper/swing/components/EditCostPanel.java

@@ -25,6 +25,7 @@ package de.hhu.ba.yoshikoWrapper.swing.components;
 import javax.swing.GroupLayout;
 import javax.swing.JLabel;
 import javax.swing.JPanel;
+import javax.swing.JSeparator;
 import javax.swing.GroupLayout.Alignment;
 
 import de.hhu.ba.yoshikoWrapper.core.LocalizationManager;
@@ -38,6 +39,8 @@ public class EditCostPanel extends JPanel {
 
 	private final DoubleInputField  icField;
 	private final DoubleInputField dcField;
+	
+	private final JSeparator separator;
 
 	private final JLabel icLabel;
 	private final JLabel dcLabel;
@@ -57,15 +60,16 @@ public class EditCostPanel extends JPanel {
 		icField.setText("-1.0");
 		icField.setToolTipText(LocalizationManager.get("icTooltip"));
 		dcField.setText("1.0");
+		
+		separator = new JSeparator(JSeparator.HORIZONTAL);
 
 		icLabel = new JLabel(LocalizationManager.get("defaultInsertion"));
 		dcLabel = new JLabel(LocalizationManager.get("defaultDeletion"));
 
 		//Add components
-		SwingUtil.addAll(this,icLabel,icField);
-		SwingUtil.addAll(this,dcLabel,dcField);
+		SwingUtil.addAll(this,columnMapper,separator,icLabel,icField,dcLabel,dcField);
 		//SwingUtil.addAll(helpButton);
-		SwingUtil.addAll(this,columnMapper);
+
 
 
 		//Layout
@@ -74,6 +78,7 @@ public class EditCostPanel extends JPanel {
 		layout.setHorizontalGroup(layout.createParallelGroup()
 				//.addComponent(helpButton,Alignment.TRAILING)
 				.addComponent(columnMapper)
+				.addComponent(separator)
 				.addGroup(layout.createSequentialGroup()
 						.addGroup(layout.createParallelGroup(Alignment.LEADING)
 								.addComponent(icLabel)
@@ -90,6 +95,7 @@ public class EditCostPanel extends JPanel {
 		layout.setVerticalGroup(layout.createSequentialGroup()
 				//.addComponent(helpButton)
 				.addComponent(columnMapper)
+				.addComponent(separator)
 				.addGroup(layout.createParallelGroup(Alignment.BASELINE)
 						.addComponent(icLabel)
 						.addGap(4)

src/main/java/de/hhu/ba/yoshikoWrapper/swing/components/MainPanel.java

@@ -209,7 +209,7 @@ public class MainPanel extends JPanel implements CytoPanelComponent {
 					.addPreferredGap(LayoutStyle.ComponentPlacement.RELATED, DEFAULT_SIZE, Short.MAX_VALUE)
 					.addComponent(about,DEFAULT_SIZE, DEFAULT_SIZE,DEFAULT_SIZE)
 				)
-				.addGap(4)
+				.addGap(8)
 				.addComponent(showAdvancedOptions,DEFAULT_SIZE, DEFAULT_SIZE,DEFAULT_SIZE)
 				.addComponent(scrollPane,DEFAULT_SIZE, DEFAULT_SIZE,DEFAULT_SIZE)
 				.addComponent(runButton,DEFAULT_SIZE, DEFAULT_SIZE,DEFAULT_SIZE)
@@ -228,7 +228,7 @@ public class MainPanel extends JPanel implements CytoPanelComponent {
 						.addComponent(header,DEFAULT_SIZE,DEFAULT_SIZE,PREFERRED_SIZE)
 						.addComponent(about,Alignment.TRAILING,DEFAULT_SIZE,DEFAULT_SIZE,PREFERRED_SIZE)
 				)
-				.addGap(4)
+				.addGap(8)
 				.addComponent(showAdvancedOptions,DEFAULT_SIZE,DEFAULT_SIZE,PREFERRED_SIZE)
 				.addComponent(scrollPane,DEFAULT_SIZE,DEFAULT_SIZE,DEFAULT_SIZE)
 				.addComponent(runButton,DEFAULT_SIZE,DEFAULT_SIZE,PREFERRED_SIZE)