some cleanup/ removed "double wrapping"

dummy classes for referencing object pointers

src/main/java/de/hhu/ba/yoshikoWrapper/swig/LibraryInterface.java

@@ -8,9 +8,27 @@
 
 package de.hhu.ba.yoshikoWrapper.swig;
 
-public class LibraryInterface implements LibraryInterfaceConstants {
+public class LibraryInterface {
+  public static SWIGTYPE_p_ysk__ClusterEditingInstance new_ClusterEditingInstance() {
+    long cPtr = LibraryInterfaceJNI.new_ClusterEditingInstance();
+    return (cPtr == 0) ? null : new SWIGTYPE_p_ysk__ClusterEditingInstance(cPtr, true);
+  }
+
+  public static void ClusterEditingInstance_initNode(SWIGTYPE_p_ysk__ClusterEditingInstance self, SWIGTYPE_p_lemon__FullGraph__Node node, String name, SWIGTYPE_p_std__vectorT_int_t cluster) {
+    LibraryInterfaceJNI.ClusterEditingInstance_initNode(SWIGTYPE_p_ysk__ClusterEditingInstance.getCPtr(self), SWIGTYPE_p_lemon__FullGraph__Node.getCPtr(node), name, SWIGTYPE_p_std__vectorT_int_t.getCPtr(cluster));
+  }
+
+  public static void ClusterEditingInstance_initEdge(SWIGTYPE_p_ysk__ClusterEditingInstance self, SWIGTYPE_p_lemon__FullGraph__Edge edge, double weight, boolean permanent, boolean forbidden) {
+    LibraryInterfaceJNI.ClusterEditingInstance_initEdge(SWIGTYPE_p_ysk__ClusterEditingInstance.getCPtr(self), SWIGTYPE_p_lemon__FullGraph__Edge.getCPtr(edge), weight, permanent, forbidden);
+  }
+
   public static String getVersionString() {
     return LibraryInterfaceJNI.getVersionString();
   }
 
+  public static SWIGTYPE_p_ysk__ClusterEditingInstance createNewProblemInstance() {
+    long cPtr = LibraryInterfaceJNI.createNewProblemInstance();
+    return (cPtr == 0) ? null : new SWIGTYPE_p_ysk__ClusterEditingInstance(cPtr, false);
+  }
+
 }

src/main/java/de/hhu/ba/yoshikoWrapper/swig/LibraryInterfaceJNI.java

@@ -9,6 +9,9 @@
 package de.hhu.ba.yoshikoWrapper.swig;
 
 public class LibraryInterfaceJNI {
-  public final static native String YOSHIKO_VERSION_get();
+  public final static native long new_ClusterEditingInstance();
+  public final static native void ClusterEditingInstance_initNode(long jarg1, long jarg2, String jarg3, long jarg4);
+  public final static native void ClusterEditingInstance_initEdge(long jarg1, long jarg2, double jarg3, boolean jarg4, boolean jarg5);
   public final static native String getVersionString();
+  public final static native long createNewProblemInstance();
 }

src/main/java/de/hhu/ba/yoshikoWrapper/swig/SWIGTYPE_p_lemon__FullGraph__Edge.java

+/* ----------------------------------------------------------------------------
+ * This file was automatically generated by SWIG (http://www.swig.org).
+ * Version 3.0.8
+ *
+ * Do not make changes to this file unless you know what you are doing--modify
+ * the SWIG interface file instead.
+ * ----------------------------------------------------------------------------- */
+
+package de.hhu.ba.yoshikoWrapper.swig;
+
+public class SWIGTYPE_p_lemon__FullGraph__Edge {
+  private transient long swigCPtr;
+
+  protected SWIGTYPE_p_lemon__FullGraph__Edge(long cPtr, @SuppressWarnings("unused") boolean futureUse) {
+    swigCPtr = cPtr;
+  }
+
+  protected SWIGTYPE_p_lemon__FullGraph__Edge() {
+    swigCPtr = 0;
+  }
+
+  protected static long getCPtr(SWIGTYPE_p_lemon__FullGraph__Edge obj) {
+    return (obj == null) ? 0 : obj.swigCPtr;
+  }
+}
+

src/main/java/de/hhu/ba/yoshikoWrapper/swig/SWIGTYPE_p_lemon__FullGraph__Node.java

+/* ----------------------------------------------------------------------------
+ * This file was automatically generated by SWIG (http://www.swig.org).
+ * Version 3.0.8
+ *
+ * Do not make changes to this file unless you know what you are doing--modify
+ * the SWIG interface file instead.
+ * ----------------------------------------------------------------------------- */
+
+package de.hhu.ba.yoshikoWrapper.swig;
+
+public class SWIGTYPE_p_lemon__FullGraph__Node {
+  private transient long swigCPtr;
+
+  protected SWIGTYPE_p_lemon__FullGraph__Node(long cPtr, @SuppressWarnings("unused") boolean futureUse) {
+    swigCPtr = cPtr;
+  }
+
+  protected SWIGTYPE_p_lemon__FullGraph__Node() {
+    swigCPtr = 0;
+  }
+
+  protected static long getCPtr(SWIGTYPE_p_lemon__FullGraph__Node obj) {
+    return (obj == null) ? 0 : obj.swigCPtr;
+  }
+}
+

src/main/java/de/hhu/ba/yoshikoWrapper/swig/LibraryInterfaceConstants.java → src/main/java/de/hhu/ba/yoshikoWrapper/swig/SWIGTYPE_p_std__vectorT_int_t.java

@@ -8,6 +8,19 @@
 
 package de.hhu.ba.yoshikoWrapper.swig;
 
-public interface LibraryInterfaceConstants {
-  public final static String YOSHIKO_VERSION = LibraryInterfaceJNI.YOSHIKO_VERSION_get();
+public class SWIGTYPE_p_std__vectorT_int_t {
+  private transient long swigCPtr;
+
+  protected SWIGTYPE_p_std__vectorT_int_t(long cPtr, @SuppressWarnings("unused") boolean futureUse) {
+    swigCPtr = cPtr;
+  }
+
+  protected SWIGTYPE_p_std__vectorT_int_t() {
+    swigCPtr = 0;
   }
+
+  protected static long getCPtr(SWIGTYPE_p_std__vectorT_int_t obj) {
+    return (obj == null) ? 0 : obj.swigCPtr;
+  }
+}
+

src/main/java/de/hhu/ba/yoshikoWrapper/swig/SWIGTYPE_p_ysk__ClusterEditingInstance.java

+/* ----------------------------------------------------------------------------
+ * This file was automatically generated by SWIG (http://www.swig.org).
+ * Version 3.0.8
+ *
+ * Do not make changes to this file unless you know what you are doing--modify
+ * the SWIG interface file instead.
+ * ----------------------------------------------------------------------------- */
+
+package de.hhu.ba.yoshikoWrapper.swig;
+
+public class SWIGTYPE_p_ysk__ClusterEditingInstance {
+  private transient long swigCPtr;
+
+  protected SWIGTYPE_p_ysk__ClusterEditingInstance(long cPtr, @SuppressWarnings("unused") boolean futureUse) {
+    swigCPtr = cPtr;
+  }
+
+  protected SWIGTYPE_p_ysk__ClusterEditingInstance() {
+    swigCPtr = 0;
+  }
+
+  protected static long getCPtr(SWIGTYPE_p_ysk__ClusterEditingInstance obj) {
+    return (obj == null) ? 0 : obj.swigCPtr;
+  }
+}
+