Trying to have a pop-out window - at least

src/main/java/de/hhu/ba/yoshikoWrapper/cytoUtil/CyUtilities.java

@@ -23,14 +23,6 @@
 package de.hhu.ba.yoshikoWrapper.cytoUtil;
 
 
-import java.awt.Component;
-
-import org.cytoscape.application.swing.CytoPanel;
-import org.cytoscape.application.swing.CytoPanelComponent2;
-import org.cytoscape.application.swing.CytoPanelName;
-
-import de.hhu.ba.yoshikoWrapper.core.CyCore;
-
 /**
  * Helper functions that simplify the Cytoscape API that haven't found a home in any other class
  *
@@ -42,18 +34,24 @@ public class CyUtilities {
 	 */
 	public static void highlightCyBrowser() {
 		//We retrieve the result panel
-		CytoPanel resultPanel = CyCore.swing.getCytoPanel(CytoPanelName.EAST);
-		for (int i= 0; i< resultPanel.getCytoPanelComponentCount(); i++) {
-			Component component = resultPanel.getComponentAt(i);
-			if (component instanceof CytoPanelComponent2) {
-				CytoPanelComponent2 cmp = (CytoPanelComponent2) component;
-				if (cmp.getTitle().contains("YoshikoInfo")) {
-					resultPanel.setSelectedIndex(i);
-					return;
-				}
-			}
+		//CytoPanel resultPanel = CyCore.swing.getCytoPanel(CytoPanelName.EAST);
+		
+		//VARIANT 1: FETCH BY TITLE OF TAB
+		
+//		for (int i= 0; i< resultPanel.getCytoPanelComponentCount(); i++) {
+//			Component component = resultPanel.getComponentAt(i);
+//			if (component instanceof CytoPanelComponent2) {
+//				CytoPanelComponent2 cmp = (CytoPanelComponent2) component;
+//				if (cmp.getTitle().contains("YoshikoInfo")) {
+//					resultPanel.setSelectedIndex(i);
+//					return;
+//				}
+//			}
+//			
+//		}
+		
+		//VARIANT 2: FETCH BY CLASS OF TAB COMPONENT
 		
-		}
 //		int index = resultPanel.indexOfComponent("edu.ucsf.rbvi.cyBrowser.internal.view.ResultsPanelBrowser");
 //		if (index != -1) {
 //			resultPanel.setSelectedIndex(index);

src/main/java/de/hhu/ba/yoshikoWrapper/help/HelpLinks.java

@@ -30,6 +30,7 @@ public final class HelpLinks {
 	static {
 		mainInfo.put("url", "file:///home/philipp/workspace/cs/cytoscape-tutorials/presentations/yoshiko.html");
 		mainInfo.put("title", "Yoshiko Info");
+		//mainInfo.put("id", "AboutYoshiko");
 		//mainInfo.put("url", "https://spqrph.github.io/cytoscape-tutorials/presentations/yoshiko.html#/title");
 	}
 

src/main/java/de/hhu/ba/yoshikoWrapper/swing/components/HelpButton.java

@@ -33,7 +33,6 @@ import javax.swing.JButton;
 
 import de.hhu.ba.yoshikoWrapper.core.LocalizationManager;
 import de.hhu.ba.yoshikoWrapper.cytoUtil.CommandExecutor;
-import de.hhu.ba.yoshikoWrapper.cytoUtil.CyUtilities;
 import de.hhu.ba.yoshikoWrapper.help.HelpLinks;
 import de.hhu.ba.yoshikoWrapper.swing.GraphicsLoader;
 
@@ -72,9 +71,9 @@ public class HelpButton extends JButton{
 			new ActionListener() {
 				@Override
 				public void actionPerformed(ActionEvent e) {
-					CommandExecutor.executeCommand("cybrowser", "show",HelpLinks.mainInfo , null);
+					CommandExecutor.executeCommand("cybrowser", "dialog",HelpLinks.mainInfo , null);
 					//Workaround to instantly select/highlight the CyBrowser tab
-					CyUtilities.highlightCyBrowser();
+					//CyUtilities.highlightCyBrowser();
 				}
 			}
 		);