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Seperate Compilation of C++/Java code for now

build.gradle

 plugins {
-  id 'org.ajoberstar.grgit' version '1.7.2'
-  id 'fr.echoes.gradle.cpp' version '1.2.9'
   id 'maven'
 }
 
-//Hacky woraround for conflicting task names with maven and cpp plugin
-tasks.remove(install)
-
 apply plugin: 'java'
 
 
@@ -17,55 +12,12 @@ description = """yoshikoWrapper"""
 sourceCompatibility = 1.8
 targetCompatibility = 1.8
 
-def yoshikoDir = 'build/yoshikoSource'
-
-/*
-Clone task to fetch the required C++ code from the yoshiko repository
-*/
-task cloneYoshikoCode {
-
-	description = 'Fetches the Yoshiko Source from the github repository for further processing'
-	doLast{
-		if (!(file(yoshikoDir).exists())){
-			logger.info("Yoshiko source files don't exist yet, cloning ...")
-			org.ajoberstar.grgit.Grgit.clone(dir: file(yoshikoDir), uri: 'https://github.com/spqrPh/yoshiko')
-			//TODO: Always checkout a version that is tagged as "stable"
-			mkdir yoshikoDir+"/build"
-		}
-	}
-}
-
-task launchCMake(type: Exec, group: "init") {
-    workingDir yoshikoDir+"/build"
-    executable = "cmake"
-    args  ".."
-}
-
-
-cpp {
-  applicationType = "clibrary"
-  buildTasksEnabled = false
-  exec.with {
-    execPath = yoshikoDir+"/build"
-    compileCppExecPath = "make"
-    compileCppBaseArgs = ""
-    compileCppExecWorkingDir = yoshikoDir+"/build"
-  }
-}
-
-//Task-Chain
-launchCMake.dependsOn cloneYoshikoCode
-compileCpp.dependsOn launchCMake
-compileJava.dependsOn compileCpp
-jar.dependsOn compileJava
-
 repositories {
      maven { url "http://code.cytoscape.org/nexus/content/repositories/snapshots/" }
      maven { url "http://code.cytoscape.org/nexus/content/repositories/releases/" }
      maven { url "http://repo.maven.apache.org/maven2" }
 }
 
-
 dependencies {
     compile group: 'org.osgi', name: 'org.osgi.core', version:'4.2.0'
     compile group: 'org.cytoscape', name: 'service-api', version:'3.5.0-RC2'

src/main/java/de/hhu/bcs/yoshikoWrapper/internal/CyActivator.java

@@ -8,7 +8,7 @@ public class CyActivator extends AbstractCyActivator {
 
 	@Override
 	public void start(BundleContext context) throws Exception {
-		//DONOTHINGYET
+		System.loadLibrary("yoshiko");
 	}
 
 }