Activity · Peter Schubert / XBanalysis · GitLab

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1 year ago

Peter Schubert @schubert

pushed to branch main at Peter Schubert / XBanalysis

53ca9853 · gba_stoic_problem solved via ipopt using jax autograd and jit

2 years ago

Peter Schubert @schubert

pushed to branch main at Peter Schubert / XBanalysis

3ed33387 · gba_stoic_problem solved via ipopt using jax autograd and jit

2 years ago

Peter Schubert @schubert

pushed to branch main at Peter Schubert / XBanalysis

996c0218 · gba_sflux_problem solved via ipopt using jax autograd and jit
... and 3 more commits. Compare 29170105...996c0218

2 years ago

Peter Schubert @schubert

pushed to branch main at Peter Schubert / XBanalysis

29170105 · support unit definitions
... and 4 more commits. Compare b573771b...29170105

2 years ago

Peter Schubert @schubert

pushed to branch main at Peter Schubert / XBanalysis

b573771b · version 0.3.4 - FBA and RBA refactored to sparse matrices

2 years ago

Peter Schubert @schubert

pushed to branch main at Peter Schubert / XBanalysis

a250486e · FBA aligned to ModelPruner (using sparce matrices)

2 years ago

Peter Schubert @schubert

pushed to branch main at Peter Schubert / XBanalysis

0710e3bb · Added fbc_gene_product and collect gene-product-association
... and 1 more commit. Compare 948c03e8...0710e3bb

2 years ago

Peter Schubert @schubert

pushed to branch main at Peter Schubert / XBanalysis

948c03e8 · SboTerm class implemented together with branch support
... and 1 more commit. Compare 45ab9851...948c03e8

2 years ago

Peter Schubert @schubert

pushed to branch main at Peter Schubert / XBanalysis

45ab9851 · fba problem with split or reversible reactions optimized

2 years ago

Peter Schubert @schubert

pushed to branch main at Peter Schubert / XBanalysis

1dc4ede4 · implemented pFBA and FVA

2 years ago

Peter Schubert @schubert

pushed to branch main at Peter Schubert / XBanalysis

a1b14bc7 · Added Flux Balance Analysis (v 0.3.3)