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Laura Christine Kühle
Troubled Cell Detection
Commits
5d979ab3
Commit
5d979ab3
authored
3 years ago
by
Laura Christine Kühle
Browse files
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Moved plotting to new file 'Plotting'.
parent
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Plotting.py
+114
-0
114 additions, 0 deletions
Plotting.py
Troubled_Cell_Detector.py
+33
-127
33 additions, 127 deletions
Troubled_Cell_Detector.py
with
147 additions
and
127 deletions
Plotting.py
0 → 100644
+
114
−
0
View file @
5d979ab3
# -*- coding: utf-8 -*-
"""
@author: Laura C. Kühle
"""
import
numpy
as
np
import
matplotlib.pyplot
as
plt
import
seaborn
as
sns
from
sympy
import
Symbol
x
=
Symbol
(
'
x
'
)
z
=
Symbol
(
'
z
'
)
sns
.
set
()
def
plot_solution_and_approx
(
grid
,
exact
,
approx
,
color_exact
,
color_approx
):
print
(
color_exact
,
color_approx
)
plt
.
figure
(
'
exact_and_approx
'
)
plt
.
plot
(
grid
[
0
],
exact
[
0
],
color_exact
)
plt
.
plot
(
grid
[
0
],
approx
[
0
],
color_approx
)
plt
.
xlabel
(
'
x
'
)
plt
.
ylabel
(
'
u(x,t)
'
)
plt
.
title
(
'
Solution and Approximation
'
)
def
plot_semilog_error
(
grid
,
pointwise_error
):
plt
.
figure
(
'
semilog_error
'
)
plt
.
semilogy
(
grid
[
0
],
pointwise_error
[
0
])
plt
.
xlabel
(
'
x
'
)
plt
.
ylabel
(
'
|u(x,t)-uh(x,t)|
'
)
plt
.
title
(
'
Semilog Error plotted at Evaluation points
'
)
def
plot_error
(
grid
,
exact
,
approx
):
plt
.
figure
(
'
error
'
)
plt
.
plot
(
grid
[
0
],
exact
[
0
]
-
approx
[
0
])
plt
.
xlabel
(
'
X
'
)
plt
.
ylabel
(
'
u(x,t)-uh(x,t)
'
)
plt
.
title
(
'
Errors
'
)
def
plot_shock_tube
(
num_grid_cells
,
troubled_cell_history
,
time_history
):
plt
.
figure
(
'
shock_tube
'
)
for
pos
in
range
(
len
(
time_history
)):
current_cells
=
troubled_cell_history
[
pos
]
for
cell
in
current_cells
:
plt
.
plot
(
cell
,
time_history
[
pos
],
'
k.
'
)
plt
.
xlim
((
0
,
num_grid_cells
//
2
))
plt
.
xlabel
(
'
Cell
'
)
plt
.
ylabel
(
'
Time
'
)
plt
.
title
(
'
Shock Tubes
'
)
def
plot_details
(
fine_projection
,
fine_mesh
,
coarse_projection
,
basis
,
wavelet
,
multiwavelet_coeffs
,
num_coarse_grid_cells
,
polynomial_degree
):
averaged_projection
=
[[
coarse_projection
[
degree
][
cell
]
*
basis
[
degree
].
subs
(
x
,
value
)
for
cell
in
range
(
num_coarse_grid_cells
)
for
value
in
[
-
0.5
,
0.5
]]
for
degree
in
range
(
polynomial_degree
+
1
)]
wavelet_projection
=
[[
multiwavelet_coeffs
[
degree
][
cell
]
*
wavelet
[
degree
].
subs
(
z
,
0.5
)
*
value
for
cell
in
range
(
num_coarse_grid_cells
)
for
value
in
[(
-
1
)
**
(
polynomial_degree
+
degree
+
1
),
1
]]
for
degree
in
range
(
polynomial_degree
+
1
)]
projected_coarse
=
np
.
sum
(
averaged_projection
,
axis
=
0
)
projected_fine
=
np
.
sum
([
fine_projection
[
degree
]
*
basis
[
degree
].
subs
(
x
,
0
)
for
degree
in
range
(
polynomial_degree
+
1
)],
axis
=
0
)
projected_wavelet_coeffs
=
np
.
sum
(
wavelet_projection
,
axis
=
0
)
plt
.
figure
(
'
coeff_details
'
)
plt
.
plot
(
fine_mesh
,
projected_fine
-
projected_coarse
,
'
m-.
'
)
plt
.
plot
(
fine_mesh
,
projected_wavelet_coeffs
,
'
y
'
)
plt
.
legend
([
'
Fine-Coarse
'
,
'
Wavelet Coeff
'
])
plt
.
xlabel
(
'
X
'
)
plt
.
ylabel
(
'
Detail Coefficients
'
)
plt
.
title
(
'
Wavelet Coefficients
'
)
def
calculate_approximate_solution
(
projection
,
points
,
polynomial_degree
,
basis
):
num_points
=
len
(
points
)
basis_matrix
=
[[
basis
[
degree
].
subs
(
x
,
points
[
point
])
for
point
in
range
(
num_points
)]
for
degree
in
range
(
polynomial_degree
+
1
)]
approx
=
[[
sum
(
projection
[
degree
][
cell
]
*
basis_matrix
[
degree
][
point
]
for
degree
in
range
(
polynomial_degree
+
1
))
for
point
in
range
(
num_points
)]
for
cell
in
range
(
len
(
projection
[
0
]))]
return
np
.
reshape
(
np
.
array
(
approx
),
(
1
,
len
(
approx
)
*
num_points
))
def
calculate_exact_solution
(
mesh
,
cell_len
,
wave_speed
,
final_time
,
interval_len
,
quadrature
,
init_cond
):
grid
=
[]
exact
=
[]
num_periods
=
np
.
floor
(
wave_speed
*
final_time
/
interval_len
)
for
cell
in
range
(
len
(
mesh
)):
eval_points
=
mesh
[
cell
]
+
cell_len
/
2
*
quadrature
.
get_eval_points
()
eval_values
=
[]
for
point
in
range
(
len
(
eval_points
)):
new_entry
=
init_cond
.
calculate
(
eval_points
[
point
]
-
wave_speed
*
final_time
+
num_periods
*
interval_len
)
eval_values
.
append
(
new_entry
)
grid
.
append
(
eval_points
)
exact
.
append
(
eval_values
)
exact
=
np
.
reshape
(
np
.
array
(
exact
),
(
1
,
len
(
exact
)
*
len
(
exact
[
0
])))
grid
=
np
.
reshape
(
np
.
array
(
grid
),
(
1
,
len
(
grid
)
*
len
(
grid
[
0
])))
return
grid
,
exact
This diff is collapsed.
Click to expand it.
Troubled_Cell_Detector.py
+
33
−
127
View file @
5d979ab3
...
...
@@ -2,7 +2,7 @@
"""
@author: Laura C. Kühle, Soraya Terrab (sorayaterrab)
TODO: Move plotting to separate file (try to adjust for different equations
)
TODO: Move plotting to separate file (try to adjust for different equations
later) -> Done
TODO: Improve figure identifiers -> Done
"""
...
...
@@ -13,6 +13,8 @@ import torch
from
sympy
import
Symbol
import
ANN_Model
from
Plotting
import
plot_solution_and_approx
,
plot_semilog_error
,
plot_error
,
plot_shock_tube
,
plot_details
,
\
calculate_approximate_solution
,
calculate_exact_solution
x
=
Symbol
(
'
x
'
)
z
=
Symbol
(
'
z
'
)
...
...
@@ -60,110 +62,40 @@ class TroubledCellDetector(object):
Here come some parameter.
"""
cell_averages
=
self
.
_calculate_approximate_solution
(
projection
,
[
0
],
0
)
left_reconstructions
=
self
.
_calculate_approximate_solution
(
projection
,
[
-
1
],
self
.
_polynomial_degree
)
right_reconstructions
=
self
.
_calculate_approximate_solution
(
projection
,
[
1
],
self
.
_polynomial_degree
)
cell_averages
=
calculate_approximate_solution
(
projection
,
[
0
],
0
,
self
.
_basis
.
get_basis_vector
())
left_reconstructions
=
calculate_approximate_solution
(
projection
,
[
-
1
],
self
.
_polynomial_degree
,
self
.
_basis
.
get_basis_vector
())
right_reconstructions
=
calculate_approximate_solution
(
projection
,
[
1
],
self
.
_polynomial_degree
,
self
.
_basis
.
get_basis_vector
())
middle_idx
=
stencil_length
//
2
return
np
.
array
(
list
(
map
(
np
.
float64
,
zip
(
cell_averages
[:,
:
middle_idx
],
left_reconstructions
[:,
middle_idx
],
cell_averages
[:,
middle_idx
],
right_reconstructions
[:,
middle_idx
],
cell_averages
[:,
middle_idx
+
1
:]))))
def
plot_results
(
self
,
projection
,
troubled_cell_history
,
time_history
):
self
.
_
plot_shock_tube
(
troubled_cell_history
,
time_history
)
plot_shock_tube
(
self
.
_num_grid_cells
,
troubled_cell_history
,
time_history
)
max_error
=
self
.
_plot_mesh
(
projection
)
print
(
'
p =
'
,
self
.
_polynomial_degree
)
print
(
'
N =
'
,
self
.
_num_grid_cells
)
print
(
'
maximum error =
'
,
max_error
)
def
_plot_shock_tube
(
self
,
troubled_cell_history
,
time_history
):
plt
.
figure
(
'
shock_tube
'
)
for
pos
in
range
(
len
(
time_history
)):
current_cells
=
troubled_cell_history
[
pos
]
for
cell
in
current_cells
:
plt
.
plot
(
cell
,
time_history
[
pos
],
'
k.
'
)
plt
.
xlim
((
0
,
self
.
_num_grid_cells
//
2
))
plt
.
xlabel
(
'
Cell
'
)
plt
.
ylabel
(
'
Time
'
)
plt
.
title
(
'
Shock Tubes
'
)
def
_plot_mesh
(
self
,
projection
):
grid
,
exact
=
self
.
_calculate_exact_solution
(
self
.
_mesh
[
2
:
-
2
],
self
.
_cell_len
)
approx
=
self
.
_calculate_approximate_solution
(
projection
[:,
1
:
-
1
],
self
.
_quadrature
.
get_eval_points
(),
self
.
_polynomial_degree
)
grid
,
exact
=
calculate_exact_solution
(
self
.
_mesh
[
2
:
-
2
],
self
.
_cell_len
,
self
.
_wave_speed
,
self
.
_final_time
,
self
.
_interval_len
,
self
.
_quadrature
,
self
.
_init_cond
)
approx
=
calculate_approximate_solution
(
projection
[:,
1
:
-
1
],
self
.
_quadrature
.
get_eval_points
(),
self
.
_polynomial_degree
,
self
.
_basis
.
get_basis_vector
())
pointwise_error
=
np
.
abs
(
exact
-
approx
)
max_error
=
np
.
max
(
pointwise_error
)
self
.
_
plot_solution_and_approx
(
grid
,
exact
,
approx
,
self
.
_colors
[
'
exact
'
],
self
.
_colors
[
'
approx
'
])
plot_solution_and_approx
(
grid
,
exact
,
approx
,
self
.
_colors
[
'
exact
'
],
self
.
_colors
[
'
approx
'
])
plt
.
legend
([
'
Exact
'
,
'
Approx
'
])
self
.
_
plot_semilog_error
(
grid
,
pointwise_error
)
self
.
_
plot_error
(
grid
,
exact
,
approx
)
plot_semilog_error
(
grid
,
pointwise_error
)
plot_error
(
grid
,
exact
,
approx
)
return
max_error
@staticmethod
def
_plot_solution_and_approx
(
grid
,
exact
,
approx
,
color_exact
,
color_approx
):
print
(
color_exact
,
color_approx
)
plt
.
figure
(
'
exact_and_approx
'
)
plt
.
plot
(
grid
[
0
],
exact
[
0
],
color_exact
)
plt
.
plot
(
grid
[
0
],
approx
[
0
],
color_approx
)
plt
.
xlabel
(
'
x
'
)
plt
.
ylabel
(
'
u(x,t)
'
)
plt
.
title
(
'
Solution and Approximation
'
)
@staticmethod
def
_plot_semilog_error
(
grid
,
pointwise_error
):
plt
.
figure
(
'
semilog_error
'
)
plt
.
semilogy
(
grid
[
0
],
pointwise_error
[
0
])
plt
.
xlabel
(
'
x
'
)
plt
.
ylabel
(
'
|u(x,t)-uh(x,t)|
'
)
plt
.
title
(
'
Semilog Error plotted at Evaluation points
'
)
@staticmethod
def
_plot_error
(
grid
,
exact
,
approx
):
plt
.
figure
(
'
error
'
)
plt
.
plot
(
grid
[
0
],
exact
[
0
]
-
approx
[
0
])
plt
.
xlabel
(
'
X
'
)
plt
.
ylabel
(
'
u(x,t)-uh(x,t)
'
)
plt
.
title
(
'
Errors
'
)
def
_calculate_exact_solution
(
self
,
mesh
,
cell_len
):
grid
=
[]
exact
=
[]
num_periods
=
np
.
floor
(
self
.
_wave_speed
*
self
.
_final_time
/
self
.
_interval_len
)
for
cell
in
range
(
len
(
mesh
)):
eval_points
=
mesh
[
cell
]
+
cell_len
/
2
*
self
.
_quadrature
.
get_eval_points
()
eval_values
=
[]
for
point
in
range
(
len
(
eval_points
)):
new_entry
=
self
.
_init_cond
.
calculate
(
eval_points
[
point
]
-
self
.
_wave_speed
*
self
.
_final_time
+
num_periods
*
self
.
_interval_len
)
eval_values
.
append
(
new_entry
)
grid
.
append
(
eval_points
)
exact
.
append
(
eval_values
)
exact
=
np
.
reshape
(
np
.
array
(
exact
),
(
1
,
len
(
exact
)
*
len
(
exact
[
0
])))
grid
=
np
.
reshape
(
np
.
array
(
grid
),
(
1
,
len
(
grid
)
*
len
(
grid
[
0
])))
return
grid
,
exact
def
_calculate_approximate_solution
(
self
,
projection
,
points
,
polynomial_degree
):
num_points
=
len
(
points
)
basis
=
self
.
_basis
.
get_basis_vector
()
basis_matrix
=
[[
basis
[
degree
].
subs
(
x
,
points
[
point
])
for
point
in
range
(
num_points
)]
for
degree
in
range
(
polynomial_degree
+
1
)]
approx
=
[[
sum
(
projection
[
degree
][
cell
]
*
basis_matrix
[
degree
][
point
]
for
degree
in
range
(
polynomial_degree
+
1
))
for
point
in
range
(
num_points
)]
for
cell
in
range
(
len
(
projection
[
0
]))]
return
np
.
reshape
(
np
.
array
(
approx
),
(
1
,
len
(
approx
)
*
num_points
))
class
NoDetection
(
TroubledCellDetector
):
def
get_cells
(
self
,
projection
):
...
...
@@ -237,40 +169,12 @@ class WaveletDetector(TroubledCellDetector):
return
[]
def
plot_results
(
self
,
projection
,
troubled_cell_history
,
time_history
):
self
.
_plot_details
(
projection
)
super
().
plot_results
(
projection
,
troubled_cell_history
,
time_history
)
def
_plot_details
(
self
,
projection
):
fine_mesh
=
self
.
_mesh
[
2
:
-
2
]
fine_projection
=
projection
[:,
1
:
-
1
]
coarse_projection
=
self
.
_calculate_coarse_projection
(
projection
)
multiwavelet_coeffs
=
self
.
_calculate_wavelet_coeffs
(
projection
)
basis
=
self
.
_basis
.
get_basis_vector
()
wavelet
=
self
.
_basis
.
get_wavelet_vector
()
averaged_projection
=
[[
coarse_projection
[
degree
][
cell
]
*
basis
[
degree
].
subs
(
x
,
value
)
for
cell
in
range
(
self
.
_num_coarse_grid_cells
)
for
value
in
[
-
0.5
,
0.5
]]
for
degree
in
range
(
self
.
_polynomial_degree
+
1
)]
wavelet_projection
=
[[
multiwavelet_coeffs
[
degree
][
cell
]
*
wavelet
[
degree
].
subs
(
z
,
0.5
)
*
value
for
cell
in
range
(
self
.
_num_coarse_grid_cells
)
for
value
in
[(
-
1
)
**
(
self
.
_polynomial_degree
+
degree
+
1
),
1
]]
for
degree
in
range
(
self
.
_polynomial_degree
+
1
)]
projected_coarse
=
np
.
sum
(
averaged_projection
,
axis
=
0
)
projected_fine
=
np
.
sum
([
fine_projection
[
degree
]
*
basis
[
degree
].
subs
(
x
,
0
)
for
degree
in
range
(
self
.
_polynomial_degree
+
1
)],
axis
=
0
)
projected_wavelet_coeffs
=
np
.
sum
(
wavelet_projection
,
axis
=
0
)
plt
.
figure
(
'
coeff_details
'
)
plt
.
plot
(
fine_mesh
,
projected_fine
-
projected_coarse
,
'
m-.
'
)
plt
.
plot
(
fine_mesh
,
projected_wavelet_coeffs
,
'
y
'
)
plt
.
legend
([
'
Fine-Coarse
'
,
'
Wavelet Coeff
'
])
plt
.
xlabel
(
'
X
'
)
plt
.
ylabel
(
'
Detail Coefficients
'
)
plt
.
title
(
'
Wavelet Coefficients
'
)
coarse_projection
=
self
.
_calculate_coarse_projection
(
projection
)
plot_details
(
projection
[:,
1
:
-
1
],
self
.
_mesh
[
2
:
-
2
],
coarse_projection
,
self
.
_basis
.
get_basis_vector
(),
self
.
_basis
.
get_wavelet_vector
(),
multiwavelet_coeffs
,
self
.
_num_coarse_grid_cells
,
self
.
_polynomial_degree
)
super
().
plot_results
(
projection
,
troubled_cell_history
,
time_history
)
def
_calculate_coarse_projection
(
self
,
projection
):
basis_projection_left
,
basis_projection_right
=
self
.
_basis
.
get_basis_projections
()
...
...
@@ -289,18 +193,19 @@ class WaveletDetector(TroubledCellDetector):
return
coarse_projection
def
_plot_mesh
(
self
,
projection
):
grid
,
exact
=
self
.
_calculate_exact_solution
(
self
.
_mesh
[
2
:
-
2
],
self
.
_cell_len
)
approx
=
self
.
_calculate_approximate_solution
(
projection
[:,
1
:
-
1
],
self
.
_quadrature
.
get_eval_points
(),
self
.
_polynomial_degree
)
grid
,
exact
=
calculate_exact_solution
(
self
.
_mesh
[
2
:
-
2
],
self
.
_cell_len
,
self
.
_wave_speed
,
self
.
_final_time
,
self
.
_interval_len
,
self
.
_quadrature
,
self
.
_init_cond
)
approx
=
calculate_approximate_solution
(
projection
[:,
1
:
-
1
],
self
.
_quadrature
.
get_eval_points
(),
self
.
_polynomial_degree
,
self
.
_basis
.
get_basis_vector
())
pointwise_error
=
np
.
abs
(
exact
-
approx
)
max_error
=
np
.
max
(
pointwise_error
)
self
.
_plot_coarse_mesh
(
projection
)
self
.
_
plot_solution_and_approx
(
grid
,
exact
,
approx
,
self
.
_colors
[
'
fine_exact
'
],
self
.
_colors
[
'
fine_approx
'
])
plot_solution_and_approx
(
grid
,
exact
,
approx
,
self
.
_colors
[
'
fine_exact
'
],
self
.
_colors
[
'
fine_approx
'
])
plt
.
legend
([
'
Exact (Coarse)
'
,
'
Approx (Coarse)
'
,
'
Exact (Fine)
'
,
'
Approx (Fine)
'
])
self
.
_
plot_semilog_error
(
grid
,
pointwise_error
)
self
.
_
plot_error
(
grid
,
exact
,
approx
)
plot_semilog_error
(
grid
,
pointwise_error
)
plot_error
(
grid
,
exact
,
approx
)
return
max_error
...
...
@@ -312,10 +217,11 @@ class WaveletDetector(TroubledCellDetector):
coarse_projection
=
self
.
_calculate_coarse_projection
(
projection
)
# Plot exact and approximate solutions for coarse mesh
grid
,
exact
=
self
.
_calculate_exact_solution
(
coarse_mesh
[
1
:
-
1
],
coarse_cell_len
)
approx
=
self
.
_calculate_approximate_solution
(
coarse_projection
,
self
.
_quadrature
.
get_eval_points
(),
self
.
_polynomial_degree
)
self
.
_plot_solution_and_approx
(
grid
,
exact
,
approx
,
self
.
_colors
[
'
coarse_exact
'
],
self
.
_colors
[
'
coarse_approx
'
])
grid
,
exact
=
calculate_exact_solution
(
coarse_mesh
[
1
:
-
1
],
coarse_cell_len
,
self
.
_wave_speed
,
self
.
_final_time
,
self
.
_interval_len
,
self
.
_quadrature
,
self
.
_init_cond
)
approx
=
calculate_approximate_solution
(
coarse_projection
,
self
.
_quadrature
.
get_eval_points
(),
self
.
_polynomial_degree
,
self
.
_basis
.
get_basis_vector
())
plot_solution_and_approx
(
grid
,
exact
,
approx
,
self
.
_colors
[
'
coarse_exact
'
],
self
.
_colors
[
'
coarse_approx
'
])
class
Boxplot
(
WaveletDetector
):
...
...
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