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Commit d271a7ec authored by Sajjad Ghaffarinasabsharabiani's avatar Sajjad Ghaffarinasabsharabiani
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networkComplexityBigg/Data/shortOrganismNames.csv 0 → 100644
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,bigg_id,organism,shortO,sO
1,iYO844,Bacillus subtilis subsp. subtilis str. 168,Bacillus subtilis,B. subtilis
2,iSM199,Buchnera aphidicola str. APS,Buchnera aphidicola,B. aphidicola
3,iRC1080,Chlamydomonas,Chlamydomonas,Chlamydomonas
4,iHN637,Clostridium ljungdahlii DSM 13528,Clostridium ljungdahlii,C. ljungdahlii
5,iEC042_1314,Escherichia coli 042,Escherichia coli,E. coli
6,iECP_1309,Escherichia coli 536,Escherichia coli,E. coli
7,iEC55989_1330,Escherichia coli 55989,Escherichia coli,E. coli
8,iECABU_c1320,Escherichia coli ABU 83972,Escherichia coli,E. coli
9,iAPECO1_1312,Escherichia coli APEC O1,Escherichia coli,E. coli
10,iEcolC_1368,Escherichia coli ATCC 8739,Escherichia coli,E. coli
11,iECD_1391,Escherichia coli BL21(DE3),Escherichia coli,E. coli
12,iB21_1397,Escherichia coli BL21(DE3),Escherichia coli,E. coli
13,iECBD_1354,Escherichia coli BL21-Gold(DE3)pLysS AG,Escherichia coli,E. coli
14,iECB_1328,Escherichia coli B str. REL606,Escherichia coli,E. coli
15,iBWG_1329,Escherichia coli BW2952,Escherichia coli,E. coli
16,ic_1306,Escherichia coli CFT073,Escherichia coli,E. coli
17,iEcDH1_1363,Escherichia coli DH1,Escherichia coli,E. coli
18,iECDH1ME8569_1439,Escherichia coli DH1,Escherichia coli,E. coli
19,iEcE24377_1341,Escherichia coli E24377A,Escherichia coli,E. coli
20,iECED1_1282,Escherichia coli ED1a,Escherichia coli,E. coli
21,iETEC_1333,Escherichia coli ETEC H10407,Escherichia coli,E. coli
22,iEcHS_1320,Escherichia coli HS,Escherichia coli,E. coli
23,iECIAI1_1343,Escherichia coli IAI1,Escherichia coli,E. coli
24,iECIAI39_1322,Escherichia coli IAI39,Escherichia coli,E. coli
25,iECOK1_1307,Escherichia coli IHE3034,Escherichia coli,E. coli
26,iEKO11_1354,Escherichia coli KO11FL,Escherichia coli,E. coli
27,iLF82_1304,Escherichia coli LF82,Escherichia coli,E. coli
28,iECNA114_1301,Escherichia coli NA114,Escherichia coli,E. coli
29,iECO103_1326,Escherichia coli O103:H2 str. 12009,Escherichia coli,E. coli
30,iECO111_1330,Escherichia coli O111:H- str. 11128,Escherichia coli,E. coli
31,iE2348C_1286,Escherichia coli O127:H6 str. E2348/69,Escherichia coli,E. coli
32,iECH74115_1262,Escherichia coli O157:H7 str. EC4115,Escherichia coli,E. coli
33,iZ_1308,Escherichia coli O157:H7 str. EDL933,Escherichia coli,E. coli
34,iECs_1301,Escherichia coli O157:H7 str. Sakai,Escherichia coli,E. coli
35,iECSP_1301,Escherichia coli O157:H7 str. TW14359,Escherichia coli,E. coli
36,iECO26_1355,Escherichia coli O26:H11 str. 11368,Escherichia coli,E. coli
37,iG2583_1286,Escherichia coli O55:H7 str. CB9615,Escherichia coli,E. coli
38,iNRG857_1313,Escherichia coli O83:H1 str. NRG 857C,Escherichia coli,E. coli
39,iECS88_1305,Escherichia coli S88,Escherichia coli,E. coli
40,iECSE_1348,Escherichia coli SE11,Escherichia coli,E. coli
41,iECSF_1327,Escherichia coli SE15,Escherichia coli,E. coli
42,iEcSMS35_1347,Escherichia coli SMS-3-5,Escherichia coli,E. coli
43,iECDH10B_1368,Escherichia coli str. K-12 substr. DH10B,Escherichia coli,E. coli
44,e_coli_core,Escherichia coli str. K-12 substr. MG1655,Escherichia coli,E. coli
45,iAF1260,Escherichia coli str. K-12 substr. MG1655,Escherichia coli,E. coli
46,iAF1260b,Escherichia coli str. K-12 substr. MG1655,Escherichia coli,E. coli
47,iJO1366,Escherichia coli str. K-12 substr. MG1655,Escherichia coli,E. coli
48,iJR904,Escherichia coli str. K-12 substr. MG1655,Escherichia coli,E. coli
49,iY75_1357,Escherichia coli str. K-12 substr. W3110,Escherichia coli,E. coli
50,iUMN146_1321,Escherichia coli UM146,Escherichia coli,E. coli
51,iECUMN_1333,Escherichia coli UMN026,Escherichia coli,E. coli
52,iUMNK88_1353,Escherichia coli UMNK88,Escherichia coli,E. coli
53,iUTI89_1310,Escherichia coli UTI89,Escherichia coli,E. coli
54,iECW_1372,Escherichia coli W,Escherichia coli,E. coli
55,iWFL_1372,Escherichia coli W,Escherichia coli,E. coli
56,iAF987,Geobacter metallireducens GS-15,Geobacter metallireducens,G. metallireducens
57,iIT341,Helicobacter pylori 26695,Helicobacter pylori,H. pylori
58,iYL1228,Klebsiella pneumoniae subsp. pneumoniae MGH 78578,Klebsiella pneumoniae,K. pneumoniae
59,iAF692,Methanosarcina barkeri str. Fusaro,Methanosarcina barkeri,M. barkeri
60,iNJ661,Mycobacterium tuberculosis H37Rv,Mycobacterium tuberculosis,M. tuberculosis
61,iJN746,Pseudomonas putida KT2440,Pseudomonas putida,P. putida
62,iMM904,Saccharomyces cerevisiae S288c,Saccharomyces cerevisiae,S. cerevisiae
63,iND750,Saccharomyces cerevisiae S288c,Saccharomyces cerevisiae,S. cerevisiae
64,STM_v1_0,Salmonella enterica subsp. enterica serovar Typhimurium str. LT2,Salmonella enterica,S. enterica
65,iSbBS512_1146,Shigella boydii CDC 3083-94,Shigella boydii,S. boydii
66,iSBO_1134,Shigella boydii Sb227,Shigella boydii,S. boydii
67,iSDY_1059,Shigella dysenteriae Sd197,Shigella dysenteriae,S. dysenteriae
68,iSFxv_1172,Shigella flexneri 2002017,Shigella flexneri,S. flexneri
69,iS_1188,Shigella flexneri 2a str. 2457T,Shigella flexneri,S. flexneri
70,iSF_1195,Shigella flexneri 2a str. 301,Shigella flexneri,S. flexneri
71,iSFV_1184,Shigella flexneri 5 str. 8401,Shigella flexneri,S. flexneri
72,iSSON_1240,Shigella sonnei Ss046,Shigella sonnei,S. sonnei
73,iSB619,Staphylococcus aureus subsp. aureus N315,Staphylococcus aureus,S. aureus
74,iJN678,Synechocystis sp. PCC 6803,Synechocystis,Synechocystis
75,iLJ478,Thermotoga maritima MSB8,Thermotoga maritima,T. maritima
76,iPC815,Yersinia pestis CO92,Yersinia pestis,Y. pestis
77,iAM_Pb448,Plasmodium berghei,Plasmodium berghei,P. berghei
78,iAM_Pc455,Plasmodium cynomolgi strain B,Plasmodium cynomolgi,P. cynomolgi
79,iAM_Pf480,Plasmodium falciparum 3D7,Plasmodium falciparum,P. falciparum
80,iAM_Pk459,Plasmodium knowlesi strain H,Plasmodium knowlesi,P. knowlesi
81,iAM_Pv461,Plasmodium vivax Sal-1,Plasmodium vivax,P. vivax
82,iCN718,Acinetobacter baumannii AYE,Acinetobacter baumannii,A. baumannii
83,iCN900,Clostridioides difficile 630,Clostridioides difficile,C. difficile
84,iEC1344_C,Escherichia coli C,Escherichia coli,E. coli
85,iEC1349_Crooks,Escherichia coli ATCC 8739,Escherichia coli,E. coli
86,iEC1356_BI23DE3,Escherichia coli BL21(DE3),Escherichia coli,E. coli
87,iEC1364_W,Escherichia coli W,Escherichia coli,E. coli
88,iEC1368_DH5a,Escherichia coli DH5[alpha],Escherichia coli,E. coli
89,iEC1372_W3110,Escherichia coli str. K-12 substr. W3110,Escherichia coli,E. coli
90,iEK1008,Mycobacterium tuberculosis H37Rv,Mycobacterium tuberculosis,M. tuberculosis
91,iIS312,Trypanosoma cruzi Dm28c,Trypanosoma cruzi,T. cruzi
92,iIS312_Amastigote,Trypanosoma cruzi Dm28c,Trypanosoma cruzi,T. cruzi
93,iIS312_Epimastigote,Trypanosoma cruzi Dm28c,Trypanosoma cruzi,T. cruzi
94,iIS312_Trypomastigote,Trypanosoma cruzi Dm28c,Trypanosoma cruzi,T. cruzi
95,iJB785,Synechococcus elongatus PCC 7942,Synechococcus elongatus,S. elongatus
96,iLB1027_lipid,Phaeodactylum tricornutum CCAP 1055/1,Phaeodactylum tricornutum,P. tricornutum
97,iNF517,Lactococcus lactis subsp. cremoris MG1363,Lactococcus lactis,L. lactis
98,iSynCJ816,Synechocystis sp. PCC 6803,Synechocystis,Synechocystis
99,iYS1720,Salmonella pan-reactome,Salmonella,Salmonella
100,iML1515,Escherichia coli str. K-12 substr. MG1655,Escherichia coli,E. coli
101,iJN1463,Pseudomonas putida KT2440,Pseudomonas putida,P. putida
102,iYS854,Staphylococcus aureus subsp. aureus USA300_TCH1516 ,Staphylococcus aureus,S. aureus
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