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ccb
sybilSBML
Commits
cf61cc58
Commit
cf61cc58
authored
Nov 29, 2016
by
Claus Jonathan Fritzemeier
Browse files
Merge branch 'writeSBML' of git.hhu.de:bioinformatik/sybilsbml into writeSBML
parents
1287400f
a6769e30
Changes
1
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Side-by-side
src/sybilSBML.c
View file @
cf61cc58
...
...
@@ -1648,10 +1648,10 @@ SEXP exportSBML (SEXP version, SEXP level,SEXP FbcLevel, SEXP filename,SEXP sybi
KineticLaw_t
*
kl
;
Parameter_t
*
para
;
ASTNode_t
*
flux
;
//
ASTNode_t* flux;
ASTNode_t
*
astMath
;
ASTNode_t
*
ast
;
char
*
mathXMLString
;
//
ASTNode_t* ast;
//
char* mathXMLString;
/*---------------------------------------------------------------------------
*
...
...
@@ -1737,7 +1737,7 @@ SEXP exportSBML (SEXP version, SEXP level,SEXP FbcLevel, SEXP filename,SEXP sybi
{
char
*
Manno
=
(
char
*
)
CHAR
(
STRING_ELT
(
mod_anno
,
0
));
if
((
Manno
!=
NULL
)
&&
(
Manno
[
0
]
!=
'\0'
))
{
SBase_setMetaId
((
SBase_t
*
)
reaction
,
model_name
);
SBase_setMetaId
((
SBase_t
*
)
model
,
model_name
);
char
Mannocopy
[
strlen
(
Manno
)
+
1
];
strcpy
(
Mannocopy
,
Manno
);
// PARSING
...
...
@@ -1932,7 +1932,7 @@ SEXP exportSBML (SEXP version, SEXP level,SEXP FbcLevel, SEXP filename,SEXP sybi
if
(
!
Rf_isNull
(
gpr
)
&&
Rf_length
(
gpr
)
>
1
)
{
modelPlug
=
SBase_getPlugin
((
SBase_t
*
)(
model
),
"fbc"
);
GeneProduct_t
*
gene
;
//
GeneProduct_t* gene;
char
*
genid
=
malloc
(
100
);
for
(
i
=
0
;
i
<
LENGTH
(
allgenes
);
i
++
)
...
...
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