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Commit b4be0a89 authored by Mayo Roettger's avatar Mayo Roettger
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change version to 3.0.6 and maintainer change in configure.ac script

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DESCRIPTION
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Package: sybilSBML Package: sybilSBML
Type: Package Type: Package
Title: SBML Integration in Package 'Sybil' Title: SBML Integration in Package 'Sybil'
Version: 3.0.5 Version: 3.0.6
Date: 2018-08-15 Date: 2019-07-03
Authors@R: c(person("Mayo", "Roettger", role = "cre", email = "mayo.roettger@hhu.de"), Authors@R: c(person("Mayo", "Roettger", role = "cre", email = "mayo.roettger@hhu.de"),
person("Gabriel", "Gelius-Dietrich", role = c("aut", "ctb")), person("Gabriel", "Gelius-Dietrich", role = c("aut", "ctb")),
person(c("C.", "Jonathan"), "Fritzemeier", role = "ctb", email = "clausjonathan.fritzemeier@uni-duesseldorf.de"), person(c("C.", "Jonathan"), "Fritzemeier", role = "ctb", email = "clausjonathan.fritzemeier@uni-duesseldorf.de"),
...@@ -17,7 +17,7 @@ License: GPL-3 | file LICENSE ...@@ -17,7 +17,7 @@ License: GPL-3 | file LICENSE
LazyLoad: yes LazyLoad: yes
Collate: generics.R sbmlPtrClass.R sbmlErrorClass.R sybilSBML.R Collate: generics.R sbmlPtrClass.R sbmlErrorClass.R sybilSBML.R
uglyHack.R readSBMLmod.R zzz.R uglyHack.R readSBMLmod.R zzz.R
Packaged: 2018-08-15 11:37:00 UTC; mayo Packaged: 2019-07-03 15:45:00 UTC; mayo
Author: Mayo Roettger [cre], Author: Mayo Roettger [cre],
Gabriel Gelius-Dietrich [aut, ctb], Gabriel Gelius-Dietrich [aut, ctb],
C. Jonathan Fritzemeier [ctb], C. Jonathan Fritzemeier [ctb],
......
configure
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#! /bin/sh #! /bin/sh
# Guess values for system-dependent variables and create Makefiles. # Guess values for system-dependent variables and create Makefiles.
# Generated by GNU Autoconf 2.69 for sybilSBML 3.0.2. # Generated by GNU Autoconf 2.69 for sybilSBML 3.0.6.
# #
# Report bugs to <clausjonathan.fritzemeier@uni-duesseldorf.de>. # Report bugs to <mayo.roettger@hhu.de>.
# #
# #
# Copyright (C) 1992-1996, 1998-2012 Free Software Foundation, Inc. # Copyright (C) 1992-1996, 1998-2012 Free Software Foundation, Inc.
...@@ -267,10 +267,10 @@ fi ...@@ -267,10 +267,10 @@ fi
$as_echo "$0: be upgraded to zsh 4.3.4 or later." $as_echo "$0: be upgraded to zsh 4.3.4 or later."
else else
$as_echo "$0: Please tell bug-autoconf@gnu.org and $as_echo "$0: Please tell bug-autoconf@gnu.org and
$0: clausjonathan.fritzemeier@uni-duesseldorf.de about your $0: mayo.roettger@hhu.de about your system, including any
$0: system, including any error possibly output before this $0: error possibly output before this message. Then install
$0: message. Then install a modern shell, or manually run $0: a modern shell, or manually run the script under such a
$0: the script under such a shell if you do have one." $0: shell if you do have one."
fi fi
exit 1 exit 1
fi fi
...@@ -580,9 +580,9 @@ MAKEFLAGS= ...@@ -580,9 +580,9 @@ MAKEFLAGS=
# Identity of this package. # Identity of this package.
PACKAGE_NAME='sybilSBML' PACKAGE_NAME='sybilSBML'
PACKAGE_TARNAME='sybilsbml' PACKAGE_TARNAME='sybilsbml'
PACKAGE_VERSION='3.0.2' PACKAGE_VERSION='3.0.6'
PACKAGE_STRING='sybilSBML 3.0.2' PACKAGE_STRING='sybilSBML 3.0.6'
PACKAGE_BUGREPORT='clausjonathan.fritzemeier@uni-duesseldorf.de' PACKAGE_BUGREPORT='mayo.roettger@hhu.de'
PACKAGE_URL='' PACKAGE_URL=''
# Factoring default headers for most tests. # Factoring default headers for most tests.
...@@ -1241,7 +1241,7 @@ if test "$ac_init_help" = "long"; then ...@@ -1241,7 +1241,7 @@ if test "$ac_init_help" = "long"; then
# Omit some internal or obsolete options to make the list less imposing. # Omit some internal or obsolete options to make the list less imposing.
# This message is too long to be a string in the A/UX 3.1 sh. # This message is too long to be a string in the A/UX 3.1 sh.
cat <<_ACEOF cat <<_ACEOF
\`configure' configures sybilSBML 3.0.2 to adapt to many kinds of systems. \`configure' configures sybilSBML 3.0.6 to adapt to many kinds of systems.
Usage: $0 [OPTION]... [VAR=VALUE]... Usage: $0 [OPTION]... [VAR=VALUE]...
...@@ -1303,7 +1303,7 @@ fi ...@@ -1303,7 +1303,7 @@ fi
if test -n "$ac_init_help"; then if test -n "$ac_init_help"; then
case $ac_init_help in case $ac_init_help in
short | recursive ) echo "Configuration of sybilSBML 3.0.2:";; short | recursive ) echo "Configuration of sybilSBML 3.0.6:";;
esac esac
cat <<\_ACEOF cat <<\_ACEOF
...@@ -1327,7 +1327,7 @@ Some influential environment variables: ...@@ -1327,7 +1327,7 @@ Some influential environment variables:
Use these variables to override the choices made by `configure' or to help Use these variables to override the choices made by `configure' or to help
it to find libraries and programs with nonstandard names/locations. it to find libraries and programs with nonstandard names/locations.
Report bugs to <clausjonathan.fritzemeier@uni-duesseldorf.de>. Report bugs to <mayo.roettger@hhu.de>.
_ACEOF _ACEOF
ac_status=$? ac_status=$?
fi fi
...@@ -1390,7 +1390,7 @@ fi ...@@ -1390,7 +1390,7 @@ fi
test -n "$ac_init_help" && exit $ac_status test -n "$ac_init_help" && exit $ac_status
if $ac_init_version; then if $ac_init_version; then
cat <<\_ACEOF cat <<\_ACEOF
sybilSBML configure 3.0.2 sybilSBML configure 3.0.6
generated by GNU Autoconf 2.69 generated by GNU Autoconf 2.69
Copyright (C) 2012 Free Software Foundation, Inc. Copyright (C) 2012 Free Software Foundation, Inc.
...@@ -1549,9 +1549,9 @@ $as_echo "$as_me: WARNING: $2: see the Autoconf documentation" >&2;} ...@@ -1549,9 +1549,9 @@ $as_echo "$as_me: WARNING: $2: see the Autoconf documentation" >&2;}
$as_echo "$as_me: WARNING: $2: section \"Present But Cannot Be Compiled\"" >&2;} $as_echo "$as_me: WARNING: $2: section \"Present But Cannot Be Compiled\"" >&2;}
{ $as_echo "$as_me:${as_lineno-$LINENO}: WARNING: $2: proceeding with the compiler's result" >&5 { $as_echo "$as_me:${as_lineno-$LINENO}: WARNING: $2: proceeding with the compiler's result" >&5
$as_echo "$as_me: WARNING: $2: proceeding with the compiler's result" >&2;} $as_echo "$as_me: WARNING: $2: proceeding with the compiler's result" >&2;}
( $as_echo "## ----------------------------------------------------------- ## ( $as_echo "## ----------------------------------- ##
## Report this to clausjonathan.fritzemeier@uni-duesseldorf.de ## ## Report this to mayo.roettger@hhu.de ##
## ----------------------------------------------------------- ##" ## ----------------------------------- ##"
) | sed "s/^/$as_me: WARNING: /" >&2 ) | sed "s/^/$as_me: WARNING: /" >&2
;; ;;
esac esac
...@@ -1759,7 +1759,7 @@ cat >config.log <<_ACEOF ...@@ -1759,7 +1759,7 @@ cat >config.log <<_ACEOF
This file contains any messages produced by compilers while This file contains any messages produced by compilers while
running configure, to aid debugging if configure makes a mistake. running configure, to aid debugging if configure makes a mistake.
It was created by sybilSBML $as_me 3.0.2, which was It was created by sybilSBML $as_me 3.0.6, which was
generated by GNU Autoconf 2.69. Invocation command line was generated by GNU Autoconf 2.69. Invocation command line was
$ $0 $@ $ $0 $@
...@@ -3270,7 +3270,7 @@ fi ...@@ -3270,7 +3270,7 @@ fi
LIBS="${PKG_LIBS}" LIBS="${LIBS} ${PKG_LIBS}"
CFLAGS="${CFLAGS} ${PKG_CFLAGS}" CFLAGS="${CFLAGS} ${PKG_CFLAGS}"
CPPFLAGS="${CPPFLAGS} ${PKG_CPPFLAGS}" CPPFLAGS="${CPPFLAGS} ${PKG_CPPFLAGS}"
...@@ -3546,7 +3546,6 @@ fi ...@@ -3546,7 +3546,6 @@ fi
{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for library containing readSBML" >&5 { $as_echo "$as_me:${as_lineno-$LINENO}: checking for library containing readSBML" >&5
$as_echo_n "checking for library containing readSBML... " >&6; } $as_echo_n "checking for library containing readSBML... " >&6; }
if ${ac_cv_search_readSBML+:} false; then : if ${ac_cv_search_readSBML+:} false; then :
...@@ -4262,7 +4261,7 @@ cat >>$CONFIG_STATUS <<\_ACEOF || ac_write_fail=1 ...@@ -4262,7 +4261,7 @@ cat >>$CONFIG_STATUS <<\_ACEOF || ac_write_fail=1
# report actual input values of CONFIG_FILES etc. instead of their # report actual input values of CONFIG_FILES etc. instead of their
# values after options handling. # values after options handling.
ac_log=" ac_log="
This file was extended by sybilSBML $as_me 3.0.2, which was This file was extended by sybilSBML $as_me 3.0.6, which was
generated by GNU Autoconf 2.69. Invocation command line was generated by GNU Autoconf 2.69. Invocation command line was
CONFIG_FILES = $CONFIG_FILES CONFIG_FILES = $CONFIG_FILES
...@@ -4309,13 +4308,13 @@ Usage: $0 [OPTION]... [TAG]... ...@@ -4309,13 +4308,13 @@ Usage: $0 [OPTION]... [TAG]...
Configuration files: Configuration files:
$config_files $config_files
Report bugs to <clausjonathan.fritzemeier@uni-duesseldorf.de>." Report bugs to <mayo.roettger@hhu.de>."
_ACEOF _ACEOF
cat >>$CONFIG_STATUS <<_ACEOF || ac_write_fail=1 cat >>$CONFIG_STATUS <<_ACEOF || ac_write_fail=1
ac_cs_config="`$as_echo "$ac_configure_args" | sed 's/^ //; s/[\\""\`\$]/\\\\&/g'`" ac_cs_config="`$as_echo "$ac_configure_args" | sed 's/^ //; s/[\\""\`\$]/\\\\&/g'`"
ac_cs_version="\\ ac_cs_version="\\
sybilSBML config.status 3.0.2 sybilSBML config.status 3.0.6
configured by $0, generated by GNU Autoconf 2.69, configured by $0, generated by GNU Autoconf 2.69,
with options \\"\$ac_cs_config\\" with options \\"\$ac_cs_config\\"
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configure.ac
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AC_INIT([sybilSBML], [3.0.2], [clausjonathan.fritzemeier@uni-duesseldorf.de]) AC_INIT([sybilSBML], [3.0.6], [mayo.roettger@hhu.de])
dnl # -------------------------------------------------------------------- dnl # --------------------------------------------------------------------
dnl # global (environment) variables dnl # global (environment) variables
...@@ -222,7 +222,7 @@ dnl # -------------------------------------------------------------------- ...@@ -222,7 +222,7 @@ dnl # --------------------------------------------------------------------
dnl # check header and library dnl # check header and library
dnl # -------------------------------------------------------------------- dnl # --------------------------------------------------------------------
LIBS="${PKG_LIBS}" LIBS="${LIBS} ${PKG_LIBS}"
CFLAGS="${CFLAGS} ${PKG_CFLAGS}" CFLAGS="${CFLAGS} ${PKG_CFLAGS}"
CPPFLAGS="${CPPFLAGS} ${PKG_CPPFLAGS}" CPPFLAGS="${CPPFLAGS} ${PKG_CPPFLAGS}"
...@@ -231,7 +231,6 @@ AC_CHECK_HEADER([sbml/SBMLTypes.h], , ...@@ -231,7 +231,6 @@ AC_CHECK_HEADER([sbml/SBMLTypes.h], ,
sybilSBML requires libSBML from http://www.sbml.org/. sybilSBML requires libSBML from http://www.sbml.org/.
use --with-sbml-include or PKG_CPPFLAGS to specify the include path.])) use --with-sbml-include or PKG_CPPFLAGS to specify the include path.]))
AC_SEARCH_LIBS([readSBML], [sbml], , AC_SEARCH_LIBS([readSBML], [sbml], ,
AC_MSG_ERROR([Could not link to libSBML: AC_MSG_ERROR([Could not link to libSBML:
use --with-sbml-lib or PKG_LIBS to specify the library path and the libraries to pass to the linker.])) use --with-sbml-lib or PKG_LIBS to specify the library path and the libraries to pass to the linker.]))
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