configure.ac

AC_INIT([sybilSBML], [3.0.2], [clausjonathan.fritzemeier@uni-duesseldorf.de])

dnl # --------------------------------------------------------------------
dnl # global (environment) variables
dnl # --------------------------------------------------------------------
dnl
dnl # PKG_CPPFLAGS       C preprocessor flags -I...
dnl # PKG_CFLAGS         C compiler flags
dnl # PKG_LIBS           libraries -l...


dnl # --------------------------------------------------------------------
dnl # R compiler and flags
dnl # --------------------------------------------------------------------

: ${R_HOME=`R RHOME`}
if test -z "${R_HOME}"; then
    echo "could not determine R_HOME"
    exit 1
fi

dnl # GNU R default settings
CC=`"${R_HOME}/bin/R" CMD config CC`
CPP=`"${R_HOME}/bin/R" CMD config CPP`
CFLAGS=`"${R_HOME}/bin/R" CMD config CFLAGS`
CPPFLAGS=`"${R_HOME}/bin/R" CMD config CPPFLAGS`
AC_PROG_CC
AC_PROG_CPP


dnl # --------------------------------------------------------------------
dnl # template config.h.in
dnl # --------------------------------------------------------------------

dnl # AC_CONFIG_HEADERS([src/config.h])


dnl # --------------------------------------------------------------------
dnl # test for global variables
dnl # --------------------------------------------------------------------

ARGS_OK="FALSE"

if test [ -n "$PKG_CPPFLAGS" -a -n "$PKG_LIBS" ] ; then
    ARGS_OK="TRUE"
else
    if test [ -n "$PKG_CPPFLAGS" -o -n "$PKG_LIBS" ] ; then
        AC_MSG_ERROR([Please set both variables: PKG_CPPFLAGS AND PKG_LIBS])
    fi
fi


dnl # --------------------------------------------------------------------
dnl # get arguments
dnl # --------------------------------------------------------------------

AC_ARG_WITH(sbml-include,
            AC_HELP_STRING([--with-sbml-include=PATH],
                           [location of libSBML include directory]
                          ),
            [SBML_INCLUDE=$withval],
            [SBML_INCLUDE=""])

AC_ARG_WITH(sbml-lib,
            AC_HELP_STRING([--with-sbml-lib=PATH],
                           [location of SBML callable library]
                          ),
            [SBML_LIB=$withval],
            [SBML_LIB=""])