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general
albi
Bachelor Mario Surlemont
Commits
1b55a361
Commit
1b55a361
authored
5 years ago
by
msurl
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added callback function for gurobi to lazily add connectivity constraints and refactored code
parent
f1dd6676
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python/conda package/k_hop_dominating_set_gurobi/k_hop_dominating_set_gurobi/k_hop_dom_set.py
+43
-51
43 additions, 51 deletions
...g_set_gurobi/k_hop_dominating_set_gurobi/k_hop_dom_set.py
with
43 additions
and
51 deletions
python/conda package/k_hop_dominating_set_gurobi/k_hop_dominating_set_gurobi/k_hop_dom_set.py
+
43
−
51
View file @
1b55a361
...
@@ -11,7 +11,7 @@ from gurobipy import GRB
...
@@ -11,7 +11,7 @@ from gurobipy import GRB
import
datetime
import
datetime
import
sys
import
sys
import
matplotlib.pyplot
as
plt
import
matplotlib.pyplot
as
plt
#
import lp_to_nx_graph
import
lp_to_nx_graph
class
DominatingSet
:
class
DominatingSet
:
...
@@ -60,12 +60,20 @@ class KHopDominatingSet(DominatingSet):
...
@@ -60,12 +60,20 @@ class KHopDominatingSet(DominatingSet):
class
ConnectedKHopDominatingSet
(
KHopDominatingSet
):
class
ConnectedKHopDominatingSet
(
KHopDominatingSet
):
def
__init__
(
self
,
G
,
k
,
name
=
"
CkDS
"
):
def
__init__
(
self
,
G
,
k
,
name
=
"
CkDS
"
,
exclude
=
{}
):
self
.
G
=
G
self
.
G
=
G
super
().
__init__
(
G
,
k
,
name
)
super
().
__init__
(
G
,
k
,
name
)
# self.m.addConstr(gp.quicksum(gp.quicksum(self.nodes[w] for w in G.neighbors(v)) -2*self.nodes[v] for v in G.nodes) >= -2)
if
exclude
:
self
.
m
.
addConstrs
(
self
.
nodes
[
v
]
<=
gp
.
quicksum
(
self
.
nodes
[
w
]
for
w
in
G
.
neighbors
(
v
))
for
v
in
G
.
nodes
if
v
not
in
exclude
)
else
:
self
.
m
.
addConstrs
(
self
.
nodes
[
v
]
<=
gp
.
quicksum
(
self
.
nodes
[
w
]
for
w
in
G
.
neighbors
(
v
))
for
v
in
G
.
nodes
)
self
.
m
.
addConstrs
(
self
.
nodes
[
v
]
<=
gp
.
quicksum
(
self
.
nodes
[
w
]
for
w
in
G
.
neighbors
(
v
))
for
v
in
G
.
nodes
)
def
min_ij_separator
(
G
,
i
,
j
,
C_i
):
def
min_ij_separator
(
G
,
i
,
j
,
C_i
):
N_ci
=
{
v
for
c
in
C_i
for
v
in
G
.
neighbors
(
c
)}
N_ci
=
{
v
for
c
in
C_i
for
v
in
G
.
neighbors
(
c
)}
G_prime
=
nx
.
Graph
(
G
)
G_prime
=
nx
.
Graph
(
G
)
...
@@ -77,17 +85,21 @@ class ConnectedKHopDominatingSet(KHopDominatingSet):
...
@@ -77,17 +85,21 @@ class ConnectedKHopDominatingSet(KHopDominatingSet):
return
R_j
.
intersection
(
N_ci
)
return
R_j
.
intersection
(
N_ci
)
def
solve
(
self
):
def
solve
(
self
):
return
self
.
solve_iteratively
(
float
(
"
inf
"
))
self
.
m
.
_vars
=
self
.
nodes
self
.
m
.
_G
=
self
.
G
self
.
m
.
Params
.
lazyConstraints
=
1
self
.
m
.
optimize
(
RootedConnectecKHopDominatingSet
.
elim_unconnectivity
)
def
solve_iteratively
(
self
,
maxIterations
):
ds
=
{
i
for
i
,
x_i
in
enumerate
(
self
.
m
.
getVars
())
if
x_i
.
x
>
0.5
}
iterations
=
0
return
ds
self
.
m
.
optimize
()
ds
=
{
i
for
i
,
x_i
in
enumerate
(
self
.
m
.
getVars
())
if
x_i
.
x
==
1
}
def
elim_unconnectivity
(
model
,
where
):
if
where
==
GRB
.
Callback
.
MIPSOL
:
vals
=
model
.
cbGetSolution
(
model
.
_vars
)
ds
=
{
i
for
i
in
model
.
_vars
.
keys
()
if
vals
[
i
]
>
0.5
}
G_prime_prime
=
self
.
G
.
subgraph
(
ds
)
G_prime_prime
=
model
.
_G
.
subgraph
(
ds
)
while
(
not
nx
.
is_connected
(
G_prime_prime
))
and
iterations
<
maxIterations
:
if
(
not
nx
.
is_connected
(
G_prime_prime
)):
iterations
+=
1
C
=
[
c
for
c
in
nx
.
algorithms
.
components
.
connected_components
(
G_prime_prime
)]
C
=
[
c
for
c
in
nx
.
algorithms
.
components
.
connected_components
(
G_prime_prime
)]
for
i
in
range
(
len
(
C
)
-
1
):
for
i
in
range
(
len
(
C
)
-
1
):
C_i
=
C
[
i
]
C_i
=
C
[
i
]
...
@@ -95,46 +107,26 @@ class ConnectedKHopDominatingSet(KHopDominatingSet):
...
@@ -95,46 +107,26 @@ class ConnectedKHopDominatingSet(KHopDominatingSet):
C_j
=
C
[
j
]
C_j
=
C
[
j
]
h
=
next
(
iter
(
C_i
))
h
=
next
(
iter
(
C_i
))
l
=
next
(
iter
(
C_j
))
l
=
next
(
iter
(
C_j
))
min_ij_sep
=
ConnectedKHopDominatingSet
.
min_ij_separator
(
self
.
G
,
h
,
l
,
C_i
)
min_ij_sep
=
ConnectedKHopDominatingSet
.
min_ij_separator
(
model
.
_G
,
h
,
l
,
C_i
)
self
.
m
.
addConstr
(
gp
.
quicksum
(
self
.
nodes
[
s
]
for
s
in
min_ij_sep
)
>=
self
.
nodes
[
h
]
+
self
.
nodes
[
l
]
-
1
)
model
.
cbLazy
(
gp
.
quicksum
(
model
.
_vars
[
s
]
for
s
in
min_ij_sep
)
>=
model
.
_vars
[
h
]
+
model
.
_vars
[
l
]
-
1
)
self
.
m
.
optimize
()
ds
=
{
i
for
i
,
x_i
in
enumerate
(
self
.
m
.
getVars
())
if
x_i
.
x
==
1
}
G_prime_prime
=
self
.
G
.
subgraph
(
ds
)
return
ds
,
iterations
def
solve_and_draw
(
self
,
iterations
=
float
(
"
inf
"
)):
starttime
=
datetime
.
datetime
.
now
()
ds
,
iterations
=
self
.
solve_iteratively
(
iterations
)
endtime
=
datetime
.
datetime
.
now
()
duration
=
endtime
-
starttime
duration_sec
=
duration
.
total_seconds
()
color_map
=
[
'
red
'
if
i
in
ds
else
'
green
'
for
i
in
self
.
G
.
nodes
]
print
(
f
"
iterations:
{
iterations
}
, duration in seconds:
{
duration_sec
}
"
)
nx
.
draw_kamada_kawai
(
self
.
G
,
node_color
=
color_map
,
with_labels
=
True
)
plt
.
show
()
class
RootedConnectecKHopDominatingSet
(
ConnectedKHopDominatingSet
):
class
RootedConnectecKHopDominatingSet
(
ConnectedKHopDominatingSet
):
def
__init__
(
self
,
G
,
k
,
root
=
0
,
name
=
"
RCkDS
"
):
def
__init__
(
self
,
G
,
k
,
root
=
0
,
name
=
"
RCkDS
"
):
super
().
__init__
(
G
,
k
,
name
)
super
().
__init__
(
G
,
k
,
name
,
exclude
=
{
root
}
)
self
.
root
=
root
self
.
root
=
root
self
.
m
.
addConstr
(
self
.
nodes
[
root
]
>=
1
)
self
.
m
.
addConstr
(
self
.
nodes
[
root
]
>=
1
)
#
if __name__ == '__main__':
if
__name__
==
'
__main__
'
:
#
G = lp_to_nx_graph.read(sys.argv[1])
G
=
lp_to_nx_graph
.
read
(
sys
.
argv
[
1
])
# if(len(sys.argv) > 2):
if
(
len
(
sys
.
argv
)
>
2
):
# k = int(sys.argv[2])
k
=
int
(
sys
.
argv
[
2
])
# else:
else
:
# k = 1
k
=
1
# if(len(sys.argv) > 3):
# maxIterations = int(sys.argv[3])
# else:
# maxIterations = float("inf")
#
dsProb = RootedConnectecKHopDominatingSet(G, k, 0)
dsProb
=
RootedConnectecKHopDominatingSet
(
G
,
k
,
0
)
#
dsProb.solve_and_draw()
dsProb
.
solve_and_draw
()
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