Description: Python package sbmlxdf. Converts between SBML (.xml) and Pandas dataframes, Excel spreadsheets (.xlsx), *.csv. SBML model creation, modification, validation and access.
Public codebase for "LAVA: Latent Action Spaces via Variational Auto-encoding for Dialogue Policy Optimization" published in COLING 2020.
Public Jupyter teaching notebooks for use with the ProB kernel for Jupyter.
XBA problem generation from SBML code metabolic/kinetic models. Support of Growth Balance Analysis (GBA), FBA and RBA
Prune a metabolic model (remove redundant reactions). Based on Network Reducer (Erdrich et al. 2015).
Code for "Dialogue Evaluation with Offline Reinforcement Learning" paper