Commit ee3fe4bc authored by Jan Hoeckesfeld's avatar Jan Hoeckesfeld
Browse files

Merge branch 'iterationset-tests-experimental' into hilbert-hpc

parents ba76f0a8 961e3f82
......@@ -21,7 +21,4 @@ config.yaml
*.simg
*.sif
hilbert/
<<<<<<< HEAD
=======
.vscode/
>>>>>>> iterationset-tests-experimental
......@@ -59,7 +59,8 @@ rule all:
rule run_dataset:
input:
general = get_general_inputs,
summarys = expand('data/auxiliary/{dataset}/{iterset}_summary.md', iterset=use_itersets(), allow_missing=True)
summarys = expand('data/auxiliary/{dataset}/{iterset}_summary.md', iterset=use_itersets(), allow_missing=True),
results = expand('data/output/{dataset}/kmers/{kmer}/predictions.probabilistic_cov.csv',kmer=kmer_lengths, allow_missing=True)
output:
summary = touch('data/output/{dataset}_summary.md')
params:
......
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