Skip to content
GitLab
Menu
Projects
Groups
Snippets
Help
Help
Support
Community forum
Keyboard shortcuts
?
Submit feedback
Sign in
Toggle navigation
Menu
Open sidebar
Jan Hoeckesfeld
Snakemake Ngs Spa Typing
Commits
120b51b5
Commit
120b51b5
authored
Oct 26, 2020
by
Jan Hoeckesfeld
Browse files
updated docker ckmertool version
parent
9d16df4c
Changes
1
Hide whitespace changes
Inline
Side-by-side
rules/probabilistic.snk
View file @
120b51b5
...
...
@@ -84,7 +84,7 @@ rule calcLikelihoods:
gpus = '0',
walltime = '01:30:00'
singularity:
'docker://phspo/ckmertools:
la
test'
'docker://phspo/ckmertools:
iterationset-
test
s
'
shell:
'c_kmertools --e {input.expected} --c {params.cpus} --m 0 --o {input.observed} --kmererror {params.e} --d {params.deviationCutoff} --target {output.likelihoods} --unexpected {output.unexpectedLikelihoods} --log {log} --itersetType {params.itersetType}'
...
...
Write
Preview
Supports
Markdown
0%
Try again
or
attach a new file
.
Attach a file
Cancel
You are about to add
0
people
to the discussion. Proceed with caution.
Finish editing this message first!
Cancel
Please
register
or
sign in
to comment