diff --git a/src/main/java/de/hhu/ba/yoshikoWrapper/core/YoshikoLoader.java b/src/main/java/de/hhu/ba/yoshikoWrapper/core/YoshikoLoader.java
index 3e0563aac04968fc50a90868cf2fe4ab8a111cf4..1c9440ef6f3bc00f673ccbf97c7264748bcc9090 100644
--- a/src/main/java/de/hhu/ba/yoshikoWrapper/core/YoshikoLoader.java
+++ b/src/main/java/de/hhu/ba/yoshikoWrapper/core/YoshikoLoader.java
@@ -2,17 +2,24 @@ package de.hhu.ba.yoshikoWrapper.core;
import java.io.File;
+import org.slf4j.Logger;
+
+import de.hhu.ba.yoshikoWrapper.logging.YoshikoLogger;
+
public class YoshikoLoader {
private static ConfigurationManager cm;
private static boolean isLoaded;
+ //Symbolic Links
+ private static Logger logger = YoshikoLogger.getInstance().getLogger();
+
public static void loadLibrary(String libPath) {
//Attempt to load from a previously stored path
File f = new File (libPath);
if (!f.exists()) {
- System.out.println("Could not find a previously saved yoshiko library path, needs to be set manually!");
+ logger.info("Could not load the Yoshiko-library from a previously saved path! You might need to set the path manually.");
return;
}
diff --git a/src/main/java/de/hhu/ba/yoshikoWrapper/gui/DoubleInputField.java b/src/main/java/de/hhu/ba/yoshikoWrapper/gui/DoubleInputField.java
index ba893825fcd140fcc01427755e2eb85c0264c16e..aea51813d9a33391133ae3390dc8f7eadac3bf8b 100644
--- a/src/main/java/de/hhu/ba/yoshikoWrapper/gui/DoubleInputField.java
+++ b/src/main/java/de/hhu/ba/yoshikoWrapper/gui/DoubleInputField.java
@@ -7,9 +7,9 @@ import javax.swing.JFormattedTextField;
*/
@SuppressWarnings("serial")
public class DoubleInputField extends JFormattedTextField{
-
- public DoubleInputField() {
- super(FormatHelper.getDoubleFormatter());
+
+ public DoubleInputField(double minValue,double maxValue) {
+ super(FormatHelper.getDoubleFormatter(minValue,maxValue));
this.setColumns(8);
}
diff --git a/src/main/java/de/hhu/ba/yoshikoWrapper/gui/EditCostPanel.java b/src/main/java/de/hhu/ba/yoshikoWrapper/gui/EditCostPanel.java
new file mode 100644
index 0000000000000000000000000000000000000000..d131859a83dc17ea639add21c47b6fad3efa752f
--- /dev/null
+++ b/src/main/java/de/hhu/ba/yoshikoWrapper/gui/EditCostPanel.java
@@ -0,0 +1,26 @@
+package de.hhu.ba.yoshikoWrapper.gui;
+
+import javax.swing.JLabel;
+
+@SuppressWarnings("serial") //Will never be serialized
+public class EditCostPanel extends ComfortPanel {
+
+ //SWING COMPONENTS
+ private ModificationCostMapper modCostMapper;
+ private DoubleInputField icField;
+ private DoubleInputField dcField;
+ private JLabel icLabel;
+ private JLabel dcLabel;
+
+ public EditCostPanel() {
+ modCostMapper = new ModificationCostMapper();
+ icField = new DoubleInputField(0,Double.NEGATIVE_INFINITY);
+ dcField = new DoubleInputField(0,Double.POSITIVE_INFINITY);
+ icLabel = new JLabel("Insertion Cost:");
+ dcLabel = new JLabel("Deletion Cost:");
+ icLabel.setLabelFor(icField);
+ dcLabel.setLabelFor(dcField);
+ this.addAll(modCostMapper,icField,dcField,icLabel,dcLabel);
+ }
+
+}
diff --git a/src/main/java/de/hhu/ba/yoshikoWrapper/gui/FormatHelper.java b/src/main/java/de/hhu/ba/yoshikoWrapper/gui/FormatHelper.java
index dd448186bb2396aafb773173aeb941b8f1731a32..770d241c3bf5523b33b3485339a1def29f354495 100644
--- a/src/main/java/de/hhu/ba/yoshikoWrapper/gui/FormatHelper.java
+++ b/src/main/java/de/hhu/ba/yoshikoWrapper/gui/FormatHelper.java
@@ -18,12 +18,12 @@ public class FormatHelper {
return formatter;
}
- public static NumberFormatter getDoubleFormatter() {
+ public static NumberFormatter getDoubleFormatter(double minValue, double maxValue) {
NumberFormat format = NumberFormat.getInstance();
NumberFormatter formatter = new NumberFormatter(format);
formatter.setValueClass(Integer.class);
- formatter.setMinimum(0);
- formatter.setMaximum(Integer.MAX_VALUE);
+ formatter.setMinimum(minValue);
+ formatter.setMaximum(maxValue);
formatter.setAllowsInvalid(false);
formatter.setCommitsOnValidEdit(true);
diff --git a/src/main/java/de/hhu/ba/yoshikoWrapper/gui/MainPanel.java b/src/main/java/de/hhu/ba/yoshikoWrapper/gui/MainPanel.java
index a50e9be6eeb50fd133b3ec531b4510c726451259..403ceb434d38d05b4666fe5239aef9ed34ac1281 100644
--- a/src/main/java/de/hhu/ba/yoshikoWrapper/gui/MainPanel.java
+++ b/src/main/java/de/hhu/ba/yoshikoWrapper/gui/MainPanel.java
@@ -33,8 +33,8 @@ public class MainPanel extends ComfortPanel implements CytoPanelComponent {
private LibStatusPanel libStatusPanel;
private JButton searchLibButton;
private JLabel yoshikoVersionLabel;
-
- private ModificationCostMapper modCostMapper;
+
+ private EditCostPanel ecPanel;
private ButtonGroup heuristicGroup;
private JRadioButton useHeuristic;
@@ -65,8 +65,8 @@ public class MainPanel extends ComfortPanel implements CytoPanelComponent {
yoshikoVersionLabel.setText(LibraryInterface.getVersionString());
}
searchLibButton = new JButton("POINT TO LIB");
-
- modCostMapper = new ModificationCostMapper();
+
+ ecPanel = new EditCostPanel();
heuristicGroup = new ButtonGroup();
useILP = new JRadioButton("Use Integer Linear Programming");
@@ -116,7 +116,7 @@ public class MainPanel extends ComfortPanel implements CytoPanelComponent {
libStatusPanel,
yoshikoVersionLabel,
searchLibButton,
- modCostMapper,
+ ecPanel,
useILP,
useHeuristic,
timeLimitSetter,
diff --git a/src/main/java/de/hhu/ba/yoshikoWrapper/gui/ModificationCostMapper.java b/src/main/java/de/hhu/ba/yoshikoWrapper/gui/ModificationCostMapper.java
index dbccbf350b2102c6be3d20a1df48569e1535c13f..78c74b132d987aa541c512b7c4e09926df50fec9 100644
--- a/src/main/java/de/hhu/ba/yoshikoWrapper/gui/ModificationCostMapper.java
+++ b/src/main/java/de/hhu/ba/yoshikoWrapper/gui/ModificationCostMapper.java
@@ -37,7 +37,7 @@ public class ModificationCostMapper extends ComfortPanel {
updateValues();
//Add a focus listener to update values
//TODO: This might be a bit inelegant but there is no way to get a callback from CS when a table changes values
- this.addFocusListener(new FocusListener() {
+ tableFields.addFocusListener(new FocusListener() {
@Override
public void focusGained(FocusEvent e) {
diff --git a/src/main/java/de/hhu/ba/yoshikoWrapper/gui/YoshikoHelpDialog.java b/src/main/java/de/hhu/ba/yoshikoWrapper/gui/YoshikoHelpDialog.java
new file mode 100644
index 0000000000000000000000000000000000000000..e30e48b2874341266093b064fc2d6e422853285f
--- /dev/null
+++ b/src/main/java/de/hhu/ba/yoshikoWrapper/gui/YoshikoHelpDialog.java
@@ -0,0 +1,14 @@
+package de.hhu.ba.yoshikoWrapper.gui;
+
+import javax.swing.JDialog;
+import javax.swing.JTree;
+
+@SuppressWarnings("serial")
+public class YoshikoHelpDialog extends JDialog {
+ private JTree navigationTree;
+
+ public YoshikoHelpDialog() {
+ navigationTree = new JTree();
+ this.add(navigationTree);
+ }
+}
diff --git a/src/main/java/de/hhu/ba/yoshikoWrapper/gui/YoshikoHelpModel.java b/src/main/java/de/hhu/ba/yoshikoWrapper/gui/YoshikoHelpModel.java
new file mode 100644
index 0000000000000000000000000000000000000000..241ac67a90a9d760cbea6b34305f2ed7b7544784
--- /dev/null
+++ b/src/main/java/de/hhu/ba/yoshikoWrapper/gui/YoshikoHelpModel.java
@@ -0,0 +1,57 @@
+package de.hhu.ba.yoshikoWrapper.gui;
+
+import javax.swing.event.TreeModelListener;
+import javax.swing.tree.TreeModel;
+import javax.swing.tree.TreePath;
+
+public class YoshikoHelpModel implements TreeModel {
+
+ @Override
+ public Object getRoot() {
+ // TODO Auto-generated method stub
+ return null;
+ }
+
+ @Override
+ public Object getChild(Object parent, int index) {
+ // TODO Auto-generated method stub
+ return null;
+ }
+
+ @Override
+ public int getChildCount(Object parent) {
+ // TODO Auto-generated method stub
+ return 0;
+ }
+
+ @Override
+ public boolean isLeaf(Object node) {
+ // TODO Auto-generated method stub
+ return false;
+ }
+
+ @Override
+ public void valueForPathChanged(TreePath path, Object newValue) {
+ // TODO Auto-generated method stub
+
+ }
+
+ @Override
+ public int getIndexOfChild(Object parent, Object child) {
+ // TODO Auto-generated method stub
+ return 0;
+ }
+
+ @Override
+ public void addTreeModelListener(TreeModelListener l) {
+ // TODO Auto-generated method stub
+
+ }
+
+ @Override
+ public void removeTreeModelListener(TreeModelListener l) {
+ // TODO Auto-generated method stub
+
+ }
+
+}
diff --git a/src/main/java/de/hhu/ba/yoshikoWrapper/logging/YoshikoLogger.java b/src/main/java/de/hhu/ba/yoshikoWrapper/logging/YoshikoLogger.java
new file mode 100644
index 0000000000000000000000000000000000000000..cbedca65cc3c8b6d71a5ac2f0f3969b258420726
--- /dev/null
+++ b/src/main/java/de/hhu/ba/yoshikoWrapper/logging/YoshikoLogger.java
@@ -0,0 +1,28 @@
+package de.hhu.ba.yoshikoWrapper.logging;
+
+import org.slf4j.Logger;
+import org.slf4j.LoggerFactory;
+
+public class YoshikoLogger {
+
+ //SINGLETON TEMPLATE//
+ private static YoshikoLogger instance;
+ private YoshikoLogger() {};
+ public static YoshikoLogger getInstance() {
+ if (instance == null) {
+ instance = new YoshikoLogger();
+ }
+ return instance;
+ }
+
+ private Logger logger;
+
+ public Logger getLogger() {
+ if (logger == null) {
+ logger = LoggerFactory.getLogger(getClass());
+ }
+ return logger;
+ }
+
+
+}
diff --git a/src/main/java/de/hhu/ba/yoshikoWrapper/logging/package-info.java b/src/main/java/de/hhu/ba/yoshikoWrapper/logging/package-info.java
new file mode 100644
index 0000000000000000000000000000000000000000..4e8e500c890ca7f22e25bb81ad33dadbf0cde386
--- /dev/null
+++ b/src/main/java/de/hhu/ba/yoshikoWrapper/logging/package-info.java
@@ -0,0 +1,4 @@
+/**
+ *
+ */
+package de.hhu.ba.yoshikoWrapper.logging;
\ No newline at end of file