diff --git a/README.md b/README.md index 7cff9cfc57ac5d10ce975ae66453f4587af89ac7..5b4ba2b3536f667c4813bdf9a8a9e747daff25dd 100644 --- a/README.md +++ b/README.md @@ -9,6 +9,9 @@ HOGVAX uses the Gurobi solver for which a license is required. Further informati ## Data HLA haplotype and allele frequencies, binding affinity predictions, and input peptides are available in [Sciebo](https://uni-duesseldorf.sciebo.de/s/jRTn9Vpff78kLqi) (~2GB). You can use the [download script](download_data.sh) to download and extract the data directly. +## HOGVAX GitHub Repository +the repo will be hosted on [GitHub](https://github.com/AlBi-HHU/hogvax) in the future. + ## Snakemake Pipeline The pipeline can be used to execute HOGVAX or the OCG approach. Additionally, the concatenation approach is always executed. Use the the [config file](Pipeline/envs/config.yaml) to adjust parameters for your execution. The pipeline can optionally be used for regional context embedding computations. Open a shell in the [Pipeline](Pipeline/) directory and execute the pipeline after adjusting the config file as follows: