From e40e7845702c52c30476fa0670832cfb39532028 Mon Sep 17 00:00:00 2001
From: Sara <sara.schulte@uni-duesseldorf.de>
Date: Thu, 6 Oct 2022 12:01:10 +0200
Subject: [PATCH] Update mhc2 example argument

---
 HOGVAX/example_arguments.txt | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/HOGVAX/example_arguments.txt b/HOGVAX/example_arguments.txt
index b6560f0..f8b3dfe 100644
--- a/HOGVAX/example_arguments.txt
+++ b/HOGVAX/example_arguments.txt
@@ -1,3 +1,3 @@
 python hogvax.py --k 170 --outdir mhcI_unlinked --populations World --peptides ../OptiVax_Data/Peptides/optivax_unlinked_mhc1_4512_filtered_peptides.pep --allele-frequencies ../OptiVax_Data/Frequencies/IEDB_population_frequency2392_normalized.pkl --ba-threshold 0.638 --binding-affinities ../OptiVax_Data/BindingAffinities/25June_mhc1_netmhc-4.1_pred_affinity_pivot.pkl.gz --min-hits 1 --verbose 1
 
-python hogvax.py --k 322 --outdir mhcII_unlinked --population World --peptides ../../OptiVax_Data/Peptides/optivax_unlinked_mhc2_37435_filtered_peptides.pep -af ../../OptiVax_Data/Frequencies/IEDB_population_frequency_mhc2_275normalized.pkl -t 0.638 -ba ../../OptiVax_Data/BindingAffinities/25June_mhc2_netmhcii-4.1_pred_affinity_pivot_v1v2.pkl.gz --min-hits 1 --verbose 1
+python hogvax.py --k 322 --outdir mhcII_unlinked --population World --peptides ../OptiVax_Data/Peptides/optivax_unlinked_mhc2_37435_filtered_peptides.pep -af ../OptiVax_Data/Frequencies/IEDB_population_frequency_mhc2_275normalized.pkl -t 0.638 -ba ../OptiVax_Data/BindingAffinities/25June_mhc2_netmhcii-4.1_pred_affinity_pivot_v1v2.pkl.gz --min-hits 1 --verbose 1
-- 
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