From 7724e8e5b949fde41e24b30940883f4444654340 Mon Sep 17 00:00:00 2001
From: Sara <sara.schulte@uni-duesseldorf.de>
Date: Tue, 4 Oct 2022 00:40:23 +0200
Subject: [PATCH] Add readmes for subfolder

---
 ContextEmbedding/README.md | 3 +++
 Evaluation/README.md       | 3 +++
 HOGVAX/README.md           | 3 ---
 3 files changed, 6 insertions(+), 3 deletions(-)
 create mode 100644 ContextEmbedding/README.md
 create mode 100644 Evaluation/README.md
 delete mode 100644 HOGVAX/README.md

diff --git a/ContextEmbedding/README.md b/ContextEmbedding/README.md
new file mode 100644
index 0000000..77190d8
--- /dev/null
+++ b/ContextEmbedding/README.md
@@ -0,0 +1,3 @@
+### Note
+
+Here, you find the scripts used for the context embedding computations. They were designed for personal usage and may require manual work to be executed on your machine.
diff --git a/Evaluation/README.md b/Evaluation/README.md
new file mode 100644
index 0000000..76881f4
--- /dev/null
+++ b/Evaluation/README.md
@@ -0,0 +1,3 @@
+### Note
+
+Here, you can find the evaluation scripts used to create the plots of this thesis. However, they were designed for personal usage and may contain absolute paths and other specific adjustments. To execute the evaluations, you may need to do manual adjustments. `comparison_data.py` is the main script, where you add paths to the vaccine peptide sets you like to evaluate.
diff --git a/HOGVAX/README.md b/HOGVAX/README.md
deleted file mode 100644
index 29fc8d4..0000000
--- a/HOGVAX/README.md
+++ /dev/null
@@ -1,3 +0,0 @@
-conda env create -f hogvax_env.yaml
-conda activate hogvax_env
-python hogvax_data.py [arguments]
-- 
GitLab