diff --git a/DESCRIPTION b/DESCRIPTION
index d1d1160c1a17f1aa64c2f209cefbf0309971b709..5873fcfd6df1ad016760fe0285090132d28f1d02 100755
--- a/DESCRIPTION
+++ b/DESCRIPTION
@@ -1,7 +1,7 @@
Package: clpAPI
Type: Package
Title: R Interface to C API of COIN-or Clp
-Version: 1.2.12
+Version: 1.2.13
Date: 2020-02-13
Authors@R: c(person("Mayo", "Roettger", role = "cre", email = "mayo.roettger@hhu.de"),
person("Gabriel", "Gelius-Dietrich", role = c("aut"), email = "geliudie@uni-duesseldorf.de"),
@@ -13,9 +13,9 @@ SystemRequirements: COIN-OR Clp (>= 1.12.0)
License: GPL-3 | file LICENSE
LazyLoad: yes
Collate: generics.R clp_ptrClass.R clp.R clpAPI.R zzz.R
-Packaged: 2020-02-13 09:00:00 UTC; mayo
+Packaged: 2020-02-13 10:47:00 UTC; mayo
Author: Mayo Roettger [cre], Gabriel Gelius-Dietrich [aut], C. Jonathan Fritzemeier [ctb]
Maintainer: Mayo Roettger <mayo.roettger@hhu.de>
NeedsCompilation: yes
Repository: CRAN
-Date/Publication: 2020-02-13 10:00:00
+Date/Publication: 2020-02-13 11:47:00
diff --git a/config.log b/config.log
deleted file mode 100755
index b807fa0001f9f26f7edd22832a6d96f90c1f3331..0000000000000000000000000000000000000000
--- a/config.log
+++ /dev/null
@@ -1,344 +0,0 @@
-This file contains any messages produced by compilers while
-running configure, to aid debugging if configure makes a mistake.
-
-It was created by clpAPI configure 1.2.10, which was
-generated by GNU Autoconf 2.69. Invocation command line was
-
- $ ./configure
-
-## --------- ##
-## Platform. ##
-## --------- ##
-
-hostname = debian
-uname -m = x86_64
-uname -r = 4.9.0-9-amd64
-uname -s = Linux
-uname -v = #1 SMP Debian 4.9.168-1+deb9u2 (2019-05-13)
-
-/usr/bin/uname -p = unknown
-/bin/uname -X = unknown
-
-/bin/arch = unknown
-/usr/bin/arch -k = unknown
-/usr/convex/getsysinfo = unknown
-/usr/bin/hostinfo = unknown
-/bin/machine = unknown
-/usr/bin/oslevel = unknown
-/bin/universe = unknown
-
-PATH: /usr/local/bin
-PATH: /usr/bin
-PATH: /bin
-PATH: /usr/local/games
-PATH: /usr/games
-PATH: /opt/gurobi801/linux64/bin
-
-
-## ----------- ##
-## Core tests. ##
-## ----------- ##
-
-configure:2113: checking for gcc
-configure:2140: result: gcc -std=gnu99
-configure:2369: checking for C compiler version
-configure:2378: gcc -std=gnu99 --version >&5
-gcc (Debian 6.3.0-18+deb9u1) 6.3.0 20170516
-Copyright (C) 2016 Free Software Foundation, Inc.
-This is free software; see the source for copying conditions. There is NO
-warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.
-
-configure:2389: $? = 0
-configure:2378: gcc -std=gnu99 -v >&5
-Using built-in specs.
-COLLECT_GCC=gcc
-COLLECT_LTO_WRAPPER=/usr/lib/gcc/x86_64-linux-gnu/6/lto-wrapper
-Target: x86_64-linux-gnu
-Configured with: ../src/configure -v --with-pkgversion='Debian 6.3.0-18+deb9u1' --with-bugurl=file:///usr/share/doc/gcc-6/README.Bugs --enable-languages=c,ada,c++,java,go,d,fortran,objc,obj-c++ --prefix=/usr --program-suffix=-6 --program-prefix=x86_64-linux-gnu- --enable-shared --enable-linker-build-id --libexecdir=/usr/lib --without-included-gettext --enable-threads=posix --libdir=/usr/lib --enable-nls --with-sysroot=/ --enable-clocale=gnu --enable-libstdcxx-debug --enable-libstdcxx-time=yes --with-default-libstdcxx-abi=new --enable-gnu-unique-object --disable-vtable-verify --enable-libmpx --enable-plugin --enable-default-pie --with-system-zlib --disable-browser-plugin --enable-java-awt=gtk --enable-gtk-cairo --with-java-home=/usr/lib/jvm/java-1.5.0-gcj-6-amd64/jre --enable-java-home --with-jvm-root-dir=/usr/lib/jvm/java-1.5.0-gcj-6-amd64 --with-jvm-jar-dir=/usr/lib/jvm-exports/java-1.5.0-gcj-6-amd64 --with-arch-directory=amd64 --with-ecj-jar=/usr/share/java/eclipse-ecj.jar --with-target-system-zlib --enable-objc-gc=auto --enable-multiarch --with-arch-32=i686 --with-abi=m64 --with-multilib-list=m32,m64,mx32 --enable-multilib --with-tune=generic --enable-checking=release --build=x86_64-linux-gnu --host=x86_64-linux-gnu --target=x86_64-linux-gnu
-Thread model: posix
-gcc version 6.3.0 20170516 (Debian 6.3.0-18+deb9u1)
-configure:2389: $? = 0
-configure:2378: gcc -std=gnu99 -V >&5
-gcc: error: unrecognized command line option '-V'
-gcc: fatal error: no input files
-compilation terminated.
-configure:2389: $? = 1
-configure:2378: gcc -std=gnu99 -qversion >&5
-gcc: error: unrecognized command line option '-qversion'; did you mean '--version'?
-gcc: fatal error: no input files
-compilation terminated.
-configure:2389: $? = 1
-configure:2409: checking whether the C compiler works
-configure:2431: gcc -std=gnu99 -g -O2 -fdebug-prefix-map=/build/r-base-3.3.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g conftest.c >&5
-configure:2435: $? = 0
-configure:2483: result: yes
-configure:2486: checking for C compiler default output file name
-configure:2488: result: a.out
-configure:2494: checking for suffix of executables
-configure:2501: gcc -std=gnu99 -o conftest -g -O2 -fdebug-prefix-map=/build/r-base-3.3.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g conftest.c >&5
-configure:2505: $? = 0
-configure:2527: result:
-configure:2549: checking whether we are cross compiling
-configure:2557: gcc -std=gnu99 -o conftest -g -O2 -fdebug-prefix-map=/build/r-base-3.3.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g conftest.c >&5
-configure:2561: $? = 0
-configure:2568: ./conftest
-configure:2572: $? = 0
-configure:2587: result: no
-configure:2592: checking for suffix of object files
-configure:2614: gcc -std=gnu99 -c -g -O2 -fdebug-prefix-map=/build/r-base-3.3.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g conftest.c >&5
-configure:2618: $? = 0
-configure:2639: result: o
-configure:2643: checking whether we are using the GNU C compiler
-configure:2662: gcc -std=gnu99 -c -g -O2 -fdebug-prefix-map=/build/r-base-3.3.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g conftest.c >&5
-configure:2662: $? = 0
-configure:2671: result: yes
-configure:2680: checking whether gcc -std=gnu99 accepts -g
-configure:2700: gcc -std=gnu99 -c -g conftest.c >&5
-configure:2700: $? = 0
-configure:2741: result: yes
-configure:2758: checking for gcc -std=gnu99 option to accept ISO C89
-configure:2821: gcc -std=gnu99 -c -g -O2 -fdebug-prefix-map=/build/r-base-3.3.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g conftest.c >&5
-configure:2821: $? = 0
-configure:2834: result: none needed
-configure:2859: checking how to run the C preprocessor
-configure:2929: result: gcc -std=gnu99 -E
-configure:2949: gcc -std=gnu99 -E conftest.c
-configure:2949: $? = 0
-configure:2963: gcc -std=gnu99 -E conftest.c
-conftest.c:9:28: fatal error: ac_nonexistent.h: No such file or directory
- #include <ac_nonexistent.h>
- ^
-compilation terminated.
-configure:2963: $? = 1
-configure: failed program was:
-| /* confdefs.h */
-| #define PACKAGE_NAME "clpAPI"
-| #define PACKAGE_TARNAME "clpapi"
-| #define PACKAGE_VERSION "1.2.10"
-| #define PACKAGE_STRING "clpAPI 1.2.10"
-| #define PACKAGE_BUGREPORT "mayo.roettger@hhu.de"
-| #define PACKAGE_URL ""
-| /* end confdefs.h. */
-| #include <ac_nonexistent.h>
-configure:3323: checking for grep that handles long lines and -e
-configure:3381: result: /bin/grep
-configure:3386: checking for egrep
-configure:3448: result: /bin/grep -E
-configure:3453: checking for ANSI C header files
-configure:3473: gcc -std=gnu99 -c -g -O2 -fdebug-prefix-map=/build/r-base-3.3.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -I/home/mayo/Clp-1.17.2/include/coin conftest.c >&5
-configure:3473: $? = 0
-configure:3546: gcc -std=gnu99 -o conftest -g -O2 -fdebug-prefix-map=/build/r-base-3.3.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -I/home/mayo/Clp-1.17.2/include/coin conftest.c -L/home/mayo/Clp-1.17.2/lib -lClp -lCoinUtils -lm >&5
-configure:3546: $? = 0
-configure:3546: ./conftest
-configure:3546: $? = 0
-configure:3557: result: yes
-configure:3570: checking for sys/types.h
-configure:3570: gcc -std=gnu99 -c -g -O2 -fdebug-prefix-map=/build/r-base-3.3.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -I/home/mayo/Clp-1.17.2/include/coin conftest.c >&5
-configure:3570: $? = 0
-configure:3570: result: yes
-configure:3570: checking for sys/stat.h
-configure:3570: gcc -std=gnu99 -c -g -O2 -fdebug-prefix-map=/build/r-base-3.3.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -I/home/mayo/Clp-1.17.2/include/coin conftest.c >&5
-configure:3570: $? = 0
-configure:3570: result: yes
-configure:3570: checking for stdlib.h
-configure:3570: gcc -std=gnu99 -c -g -O2 -fdebug-prefix-map=/build/r-base-3.3.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -I/home/mayo/Clp-1.17.2/include/coin conftest.c >&5
-configure:3570: $? = 0
-configure:3570: result: yes
-configure:3570: checking for string.h
-configure:3570: gcc -std=gnu99 -c -g -O2 -fdebug-prefix-map=/build/r-base-3.3.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -I/home/mayo/Clp-1.17.2/include/coin conftest.c >&5
-configure:3570: $? = 0
-configure:3570: result: yes
-configure:3570: checking for memory.h
-configure:3570: gcc -std=gnu99 -c -g -O2 -fdebug-prefix-map=/build/r-base-3.3.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -I/home/mayo/Clp-1.17.2/include/coin conftest.c >&5
-configure:3570: $? = 0
-configure:3570: result: yes
-configure:3570: checking for strings.h
-configure:3570: gcc -std=gnu99 -c -g -O2 -fdebug-prefix-map=/build/r-base-3.3.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -I/home/mayo/Clp-1.17.2/include/coin conftest.c >&5
-configure:3570: $? = 0
-configure:3570: result: yes
-configure:3570: checking for inttypes.h
-configure:3570: gcc -std=gnu99 -c -g -O2 -fdebug-prefix-map=/build/r-base-3.3.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -I/home/mayo/Clp-1.17.2/include/coin conftest.c >&5
-configure:3570: $? = 0
-configure:3570: result: yes
-configure:3570: checking for stdint.h
-configure:3570: gcc -std=gnu99 -c -g -O2 -fdebug-prefix-map=/build/r-base-3.3.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -I/home/mayo/Clp-1.17.2/include/coin conftest.c >&5
-configure:3570: $? = 0
-configure:3570: result: yes
-configure:3570: checking for unistd.h
-configure:3570: gcc -std=gnu99 -c -g -O2 -fdebug-prefix-map=/build/r-base-3.3.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -I/home/mayo/Clp-1.17.2/include/coin conftest.c >&5
-configure:3570: $? = 0
-configure:3570: result: yes
-configure:3584: checking stdbool.h usability
-configure:3584: gcc -std=gnu99 -c -g -O2 -fdebug-prefix-map=/build/r-base-3.3.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -I/home/mayo/Clp-1.17.2/include/coin conftest.c >&5
-configure:3584: $? = 0
-configure:3584: result: yes
-configure:3584: checking stdbool.h presence
-configure:3584: gcc -std=gnu99 -E -I/home/mayo/Clp-1.17.2/include/coin conftest.c
-configure:3584: $? = 0
-configure:3584: result: yes
-configure:3584: checking for stdbool.h
-configure:3584: result: yes
-configure:3597: checking for Clp_C_Interface.h
-configure:3597: gcc -std=gnu99 -c -g -O2 -fdebug-prefix-map=/build/r-base-3.3.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -I/home/mayo/Clp-1.17.2/include/coin conftest.c >&5
-configure:3597: $? = 0
-configure:3597: result: yes
-configure:3612: checking for library containing Clp_newModel
-configure:3643: gcc -std=gnu99 -o conftest -g -O2 -fdebug-prefix-map=/build/r-base-3.3.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -I/home/mayo/Clp-1.17.2/include/coin conftest.c -L/home/mayo/Clp-1.17.2/lib -lClp -lCoinUtils -lm >&5
-configure:3643: $? = 0
-configure:3660: result: none required
-configure:3675: checking for library containing Clp_setRowName
-configure:3706: gcc -std=gnu99 -o conftest -g -O2 -fdebug-prefix-map=/build/r-base-3.3.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -I/home/mayo/Clp-1.17.2/include/coin conftest.c -L/home/mayo/Clp-1.17.2/lib -lClp -lCoinUtils -lm >&5
-configure:3706: $? = 0
-configure:3723: result: none required
-configure:3863: creating ./config.status
-
-## ---------------------- ##
-## Running config.status. ##
-## ---------------------- ##
-
-This file was extended by clpAPI config.status 1.2.10, which was
-generated by GNU Autoconf 2.69. Invocation command line was
-
- CONFIG_FILES =
- CONFIG_HEADERS =
- CONFIG_LINKS =
- CONFIG_COMMANDS =
- $ ./config.status
-
-on debian
-
-config.status:805: creating src/Makevars
-config.status:805: creating src/config.h
-config.status:975: src/config.h is unchanged
-
-## ---------------- ##
-## Cache variables. ##
-## ---------------- ##
-
-ac_cv_c_compiler_gnu=yes
-ac_cv_env_CC_set=
-ac_cv_env_CC_value=
-ac_cv_env_CFLAGS_set=
-ac_cv_env_CFLAGS_value=
-ac_cv_env_CPPFLAGS_set=
-ac_cv_env_CPPFLAGS_value=
-ac_cv_env_CPP_set=
-ac_cv_env_CPP_value=
-ac_cv_env_LDFLAGS_set=
-ac_cv_env_LDFLAGS_value=
-ac_cv_env_LIBS_set=
-ac_cv_env_LIBS_value=
-ac_cv_env_build_alias_set=
-ac_cv_env_build_alias_value=
-ac_cv_env_host_alias_set=
-ac_cv_env_host_alias_value=
-ac_cv_env_target_alias_set=
-ac_cv_env_target_alias_value=
-ac_cv_header_Clp_C_Interface_h=yes
-ac_cv_header_inttypes_h=yes
-ac_cv_header_memory_h=yes
-ac_cv_header_stdbool_h=yes
-ac_cv_header_stdc=yes
-ac_cv_header_stdint_h=yes
-ac_cv_header_stdlib_h=yes
-ac_cv_header_string_h=yes
-ac_cv_header_strings_h=yes
-ac_cv_header_sys_stat_h=yes
-ac_cv_header_sys_types_h=yes
-ac_cv_header_unistd_h=yes
-ac_cv_objext=o
-ac_cv_path_EGREP='/bin/grep -E'
-ac_cv_path_GREP=/bin/grep
-ac_cv_prog_CPP='gcc -std=gnu99 -E'
-ac_cv_prog_ac_ct_CC='gcc -std=gnu99'
-ac_cv_prog_cc_c89=
-ac_cv_prog_cc_g=yes
-ac_cv_search_Clp_newModel='none required'
-ac_cv_search_Clp_setRowName='none required'
-
-## ----------------- ##
-## Output variables. ##
-## ----------------- ##
-
-CC='gcc -std=gnu99'
-CFLAGS='-g -O2 -fdebug-prefix-map=/build/r-base-3.3.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g '
-CPP='gcc -std=gnu99 -E'
-CPPFLAGS=' -I/home/mayo/Clp-1.17.2/include/coin'
-DEFS='-DHAVE_CONFIG_H'
-ECHO_C=''
-ECHO_N='-n'
-ECHO_T=''
-EGREP='/bin/grep -E'
-EXEEXT=''
-GREP='/bin/grep'
-LDFLAGS=''
-LIBOBJS=''
-LIBS='-L/home/mayo/Clp-1.17.2/lib -lClp -lCoinUtils -lm'
-LTLIBOBJS=''
-OBJEXT='o'
-PACKAGE_BUGREPORT='mayo.roettger@hhu.de'
-PACKAGE_NAME='clpAPI'
-PACKAGE_STRING='clpAPI 1.2.10'
-PACKAGE_TARNAME='clpapi'
-PACKAGE_URL=''
-PACKAGE_VERSION='1.2.10'
-PATH_SEPARATOR=':'
-PKG_CFLAGS=''
-PKG_CONFIG=''
-PKG_CPPFLAGS='-DHAVE_CONFIG_H -I/home/mayo/Clp-1.17.2/include/coin'
-PKG_LIBS='-L/home/mayo/Clp-1.17.2/lib -lClp -lCoinUtils -lm'
-SHELL='/bin/bash'
-ac_ct_CC='gcc -std=gnu99'
-ac_prefix_program=''
-bindir='${exec_prefix}/bin'
-build_alias=''
-datadir='${datarootdir}'
-datarootdir='${prefix}/share'
-docdir='${datarootdir}/doc/${PACKAGE_TARNAME}'
-dvidir='${docdir}'
-exec_prefix='${prefix}'
-host_alias=''
-htmldir='${docdir}'
-includedir='${prefix}/include'
-infodir='${datarootdir}/info'
-libdir='${exec_prefix}/lib'
-libexecdir='${exec_prefix}/libexec'
-localedir='${datarootdir}/locale'
-localstatedir='${prefix}/var'
-mandir='${datarootdir}/man'
-oldincludedir='/usr/include'
-pdfdir='${docdir}'
-prefix='/usr/local'
-program_transform_name='s,x,x,'
-psdir='${docdir}'
-runstatedir='${localstatedir}/run'
-sbindir='${exec_prefix}/sbin'
-sharedstatedir='${prefix}/com'
-sysconfdir='${prefix}/etc'
-target_alias=''
-
-## ----------- ##
-## confdefs.h. ##
-## ----------- ##
-
-/* confdefs.h */
-#define PACKAGE_NAME "clpAPI"
-#define PACKAGE_TARNAME "clpapi"
-#define PACKAGE_VERSION "1.2.10"
-#define PACKAGE_STRING "clpAPI 1.2.10"
-#define PACKAGE_BUGREPORT "mayo.roettger@hhu.de"
-#define PACKAGE_URL ""
-#define STDC_HEADERS 1
-#define HAVE_SYS_TYPES_H 1
-#define HAVE_SYS_STAT_H 1
-#define HAVE_STDLIB_H 1
-#define HAVE_STRING_H 1
-#define HAVE_MEMORY_H 1
-#define HAVE_STRINGS_H 1
-#define HAVE_INTTYPES_H 1
-#define HAVE_STDINT_H 1
-#define HAVE_UNISTD_H 1
-#define HAVE_STDBOOL_H 1
-#define HAVE_CLP_EXT1_17_2 1
-
-configure: exit 0
diff --git a/config.status b/config.status
deleted file mode 100755
index 33a7702988da3448639342341f3557aa6ba69e7d..0000000000000000000000000000000000000000
--- a/config.status
+++ /dev/null
@@ -1,995 +0,0 @@
-#! /bin/bash
-# Generated by configure.
-# Run this file to recreate the current configuration.
-# Compiler output produced by configure, useful for debugging
-# configure, is in config.log if it exists.
-
-debug=false
-ac_cs_recheck=false
-ac_cs_silent=false
-
-SHELL=${CONFIG_SHELL-/bin/bash}
-export SHELL
-## -------------------- ##
-## M4sh Initialization. ##
-## -------------------- ##
-
-# Be more Bourne compatible
-DUALCASE=1; export DUALCASE # for MKS sh
-if test -n "${ZSH_VERSION+set}" && (emulate sh) >/dev/null 2>&1; then :
- emulate sh
- NULLCMD=:
- # Pre-4.2 versions of Zsh do word splitting on ${1+"$@"}, which
- # is contrary to our usage. Disable this feature.
- alias -g '${1+"$@"}'='"$@"'
- setopt NO_GLOB_SUBST
-else
- case `(set -o) 2>/dev/null` in #(
- *posix*) :
- set -o posix ;; #(
- *) :
- ;;
-esac
-fi
-
-
-as_nl='
-'
-export as_nl
-# Printing a long string crashes Solaris 7 /usr/bin/printf.
-as_echo='\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\'
-as_echo=$as_echo$as_echo$as_echo$as_echo$as_echo
-as_echo=$as_echo$as_echo$as_echo$as_echo$as_echo$as_echo
-# Prefer a ksh shell builtin over an external printf program on Solaris,
-# but without wasting forks for bash or zsh.
-if test -z "$BASH_VERSION$ZSH_VERSION" \
- && (test "X`print -r -- $as_echo`" = "X$as_echo") 2>/dev/null; then
- as_echo='print -r --'
- as_echo_n='print -rn --'
-elif (test "X`printf %s $as_echo`" = "X$as_echo") 2>/dev/null; then
- as_echo='printf %s\n'
- as_echo_n='printf %s'
-else
- if test "X`(/usr/ucb/echo -n -n $as_echo) 2>/dev/null`" = "X-n $as_echo"; then
- as_echo_body='eval /usr/ucb/echo -n "$1$as_nl"'
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-D["STDC_HEADERS"]=" 1"
-D["HAVE_SYS_TYPES_H"]=" 1"
-D["HAVE_SYS_STAT_H"]=" 1"
-D["HAVE_STDLIB_H"]=" 1"
-D["HAVE_STRING_H"]=" 1"
-D["HAVE_MEMORY_H"]=" 1"
-D["HAVE_STRINGS_H"]=" 1"
-D["HAVE_INTTYPES_H"]=" 1"
-D["HAVE_STDINT_H"]=" 1"
-D["HAVE_UNISTD_H"]=" 1"
-D["HAVE_STDBOOL_H"]=" 1"
-D["HAVE_CLP_EXT1_17_2"]=" 1"
- for (key in D) D_is_set[key] = 1
- FS = ""
-}
-/^[\t ]*#[\t ]*(define|undef)[\t ]+[_abcdefghijklmnopqrstuvwxyzABCDEFGHIJKLMNOPQRSTUVWXYZ][_abcdefghijklmnopqrstuvwxyzABCDEFGHIJKLMNOPQRSTUVWXYZ0123456789]*([\t (]|$)/ {
- line = $ 0
- split(line, arg, " ")
- if (arg[1] == "#") {
- defundef = arg[2]
- mac1 = arg[3]
- } else {
- defundef = substr(arg[1], 2)
- mac1 = arg[2]
- }
- split(mac1, mac2, "(") #)
- macro = mac2[1]
- prefix = substr(line, 1, index(line, defundef) - 1)
- if (D_is_set[macro]) {
- # Preserve the white space surrounding the "#".
- print prefix "define", macro P[macro] D[macro]
- next
- } else {
- # Replace #undef with comments. This is necessary, for example,
- # in the case of _POSIX_SOURCE, which is predefined and required
- # on some systems where configure will not decide to define it.
- if (defundef == "undef") {
- print "/*", prefix defundef, macro, "*/"
- next
- }
- }
-}
-{ print }
-_ACAWK
- as_fn_error $? "could not setup config headers machinery" "$LINENO" 5
-fi # test -n "$CONFIG_HEADERS"
-
-
-eval set X " :F $CONFIG_FILES :H $CONFIG_HEADERS "
-shift
-for ac_tag
-do
- case $ac_tag in
- :[FHLC]) ac_mode=$ac_tag; continue;;
- esac
- case $ac_mode$ac_tag in
- :[FHL]*:*);;
- :L* | :C*:*) as_fn_error $? "invalid tag \`$ac_tag'" "$LINENO" 5;;
- :[FH]-) ac_tag=-:-;;
- :[FH]*) ac_tag=$ac_tag:$ac_tag.in;;
- esac
- ac_save_IFS=$IFS
- IFS=:
- set x $ac_tag
- IFS=$ac_save_IFS
- shift
- ac_file=$1
- shift
-
- case $ac_mode in
- :L) ac_source=$1;;
- :[FH])
- ac_file_inputs=
- for ac_f
- do
- case $ac_f in
- -) ac_f="$ac_tmp/stdin";;
- *) # Look for the file first in the build tree, then in the source tree
- # (if the path is not absolute). The absolute path cannot be DOS-style,
- # because $ac_f cannot contain `:'.
- test -f "$ac_f" ||
- case $ac_f in
- [\\/$]*) false;;
- *) test -f "$srcdir/$ac_f" && ac_f="$srcdir/$ac_f";;
- esac ||
- as_fn_error 1 "cannot find input file: \`$ac_f'" "$LINENO" 5;;
- esac
- case $ac_f in *\'*) ac_f=`$as_echo "$ac_f" | sed "s/'/'\\\\\\\\''/g"`;; esac
- as_fn_append ac_file_inputs " '$ac_f'"
- done
-
- # Let's still pretend it is `configure' which instantiates (i.e., don't
- # use $as_me), people would be surprised to read:
- # /* config.h. Generated by config.status. */
- configure_input='Generated from '`
- $as_echo "$*" | sed 's|^[^:]*/||;s|:[^:]*/|, |g'
- `' by configure.'
- if test x"$ac_file" != x-; then
- configure_input="$ac_file. $configure_input"
- { $as_echo "$as_me:${as_lineno-$LINENO}: creating $ac_file" >&5
-$as_echo "$as_me: creating $ac_file" >&6;}
- fi
- # Neutralize special characters interpreted by sed in replacement strings.
- case $configure_input in #(
- *\&* | *\|* | *\\* )
- ac_sed_conf_input=`$as_echo "$configure_input" |
- sed 's/[\\\\&|]/\\\\&/g'`;; #(
- *) ac_sed_conf_input=$configure_input;;
- esac
-
- case $ac_tag in
- *:-:* | *:-) cat >"$ac_tmp/stdin" \
- || as_fn_error $? "could not create $ac_file" "$LINENO" 5 ;;
- esac
- ;;
- esac
-
- ac_dir=`$as_dirname -- "$ac_file" ||
-$as_expr X"$ac_file" : 'X\(.*[^/]\)//*[^/][^/]*/*$' \| \
- X"$ac_file" : 'X\(//\)[^/]' \| \
- X"$ac_file" : 'X\(//\)$' \| \
- X"$ac_file" : 'X\(/\)' \| . 2>/dev/null ||
-$as_echo X"$ac_file" |
- sed '/^X\(.*[^/]\)\/\/*[^/][^/]*\/*$/{
- s//\1/
- q
- }
- /^X\(\/\/\)[^/].*/{
- s//\1/
- q
- }
- /^X\(\/\/\)$/{
- s//\1/
- q
- }
- /^X\(\/\).*/{
- s//\1/
- q
- }
- s/.*/./; q'`
- as_dir="$ac_dir"; as_fn_mkdir_p
- ac_builddir=.
-
-case "$ac_dir" in
-.) ac_dir_suffix= ac_top_builddir_sub=. ac_top_build_prefix= ;;
-*)
- ac_dir_suffix=/`$as_echo "$ac_dir" | sed 's|^\.[\\/]||'`
- # A ".." for each directory in $ac_dir_suffix.
- ac_top_builddir_sub=`$as_echo "$ac_dir_suffix" | sed 's|/[^\\/]*|/..|g;s|/||'`
- case $ac_top_builddir_sub in
- "") ac_top_builddir_sub=. ac_top_build_prefix= ;;
- *) ac_top_build_prefix=$ac_top_builddir_sub/ ;;
- esac ;;
-esac
-ac_abs_top_builddir=$ac_pwd
-ac_abs_builddir=$ac_pwd$ac_dir_suffix
-# for backward compatibility:
-ac_top_builddir=$ac_top_build_prefix
-
-case $srcdir in
- .) # We are building in place.
- ac_srcdir=.
- ac_top_srcdir=$ac_top_builddir_sub
- ac_abs_top_srcdir=$ac_pwd ;;
- [\\/]* | ?:[\\/]* ) # Absolute name.
- ac_srcdir=$srcdir$ac_dir_suffix;
- ac_top_srcdir=$srcdir
- ac_abs_top_srcdir=$srcdir ;;
- *) # Relative name.
- ac_srcdir=$ac_top_build_prefix$srcdir$ac_dir_suffix
- ac_top_srcdir=$ac_top_build_prefix$srcdir
- ac_abs_top_srcdir=$ac_pwd/$srcdir ;;
-esac
-ac_abs_srcdir=$ac_abs_top_srcdir$ac_dir_suffix
-
-
- case $ac_mode in
- :F)
- #
- # CONFIG_FILE
- #
-
-# If the template does not know about datarootdir, expand it.
-# FIXME: This hack should be removed a few years after 2.60.
-ac_datarootdir_hack=; ac_datarootdir_seen=
-ac_sed_dataroot='
-/datarootdir/ {
- p
- q
-}
-/@datadir@/p
-/@docdir@/p
-/@infodir@/p
-/@localedir@/p
-/@mandir@/p'
-case `eval "sed -n \"\$ac_sed_dataroot\" $ac_file_inputs"` in
-*datarootdir*) ac_datarootdir_seen=yes;;
-*@datadir@*|*@docdir@*|*@infodir@*|*@localedir@*|*@mandir@*)
- { $as_echo "$as_me:${as_lineno-$LINENO}: WARNING: $ac_file_inputs seems to ignore the --datarootdir setting" >&5
-$as_echo "$as_me: WARNING: $ac_file_inputs seems to ignore the --datarootdir setting" >&2;}
- ac_datarootdir_hack='
- s&@datadir@&${datarootdir}&g
- s&@docdir@&${datarootdir}/doc/${PACKAGE_TARNAME}&g
- s&@infodir@&${datarootdir}/info&g
- s&@localedir@&${datarootdir}/locale&g
- s&@mandir@&${datarootdir}/man&g
- s&\${datarootdir}&${prefix}/share&g' ;;
-esac
-ac_sed_extra="/^[ ]*VPATH[ ]*=[ ]*/{
-h
-s///
-s/^/:/
-s/[ ]*$/:/
-s/:\$(srcdir):/:/g
-s/:\${srcdir}:/:/g
-s/:@srcdir@:/:/g
-s/^:*//
-s/:*$//
-x
-s/\(=[ ]*\).*/\1/
-G
-s/\n//
-s/^[^=]*=[ ]*$//
-}
-
-:t
-/@[a-zA-Z_][a-zA-Z_0-9]*@/!b
-s|@configure_input@|$ac_sed_conf_input|;t t
-s&@top_builddir@&$ac_top_builddir_sub&;t t
-s&@top_build_prefix@&$ac_top_build_prefix&;t t
-s&@srcdir@&$ac_srcdir&;t t
-s&@abs_srcdir@&$ac_abs_srcdir&;t t
-s&@top_srcdir@&$ac_top_srcdir&;t t
-s&@abs_top_srcdir@&$ac_abs_top_srcdir&;t t
-s&@builddir@&$ac_builddir&;t t
-s&@abs_builddir@&$ac_abs_builddir&;t t
-s&@abs_top_builddir@&$ac_abs_top_builddir&;t t
-$ac_datarootdir_hack
-"
-eval sed \"\$ac_sed_extra\" "$ac_file_inputs" | $AWK -f "$ac_tmp/subs.awk" \
- >$ac_tmp/out || as_fn_error $? "could not create $ac_file" "$LINENO" 5
-
-test -z "$ac_datarootdir_hack$ac_datarootdir_seen" &&
- { ac_out=`sed -n '/\${datarootdir}/p' "$ac_tmp/out"`; test -n "$ac_out"; } &&
- { ac_out=`sed -n '/^[ ]*datarootdir[ ]*:*=/p' \
- "$ac_tmp/out"`; test -z "$ac_out"; } &&
- { $as_echo "$as_me:${as_lineno-$LINENO}: WARNING: $ac_file contains a reference to the variable \`datarootdir'
-which seems to be undefined. Please make sure it is defined" >&5
-$as_echo "$as_me: WARNING: $ac_file contains a reference to the variable \`datarootdir'
-which seems to be undefined. Please make sure it is defined" >&2;}
-
- rm -f "$ac_tmp/stdin"
- case $ac_file in
- -) cat "$ac_tmp/out" && rm -f "$ac_tmp/out";;
- *) rm -f "$ac_file" && mv "$ac_tmp/out" "$ac_file";;
- esac \
- || as_fn_error $? "could not create $ac_file" "$LINENO" 5
- ;;
- :H)
- #
- # CONFIG_HEADER
- #
- if test x"$ac_file" != x-; then
- {
- $as_echo "/* $configure_input */" \
- && eval '$AWK -f "$ac_tmp/defines.awk"' "$ac_file_inputs"
- } >"$ac_tmp/config.h" \
- || as_fn_error $? "could not create $ac_file" "$LINENO" 5
- if diff "$ac_file" "$ac_tmp/config.h" >/dev/null 2>&1; then
- { $as_echo "$as_me:${as_lineno-$LINENO}: $ac_file is unchanged" >&5
-$as_echo "$as_me: $ac_file is unchanged" >&6;}
- else
- rm -f "$ac_file"
- mv "$ac_tmp/config.h" "$ac_file" \
- || as_fn_error $? "could not create $ac_file" "$LINENO" 5
- fi
- else
- $as_echo "/* $configure_input */" \
- && eval '$AWK -f "$ac_tmp/defines.awk"' "$ac_file_inputs" \
- || as_fn_error $? "could not create -" "$LINENO" 5
- fi
- ;;
-
-
- esac
-
-done # for ac_tag
-
-
-as_fn_exit 0
diff --git a/configure b/configure
index 9f962684e94ec9bd8dfd9331c4ad1e65c40953fc..02f3c3f4c77704050670455ecac8224d0b0a8d42 100755
--- a/configure
+++ b/configure
@@ -1,6 +1,6 @@
#! /bin/sh
# Guess values for system-dependent variables and create Makefiles.
-# Generated by GNU Autoconf 2.69 for clpAPI 1.2.11.
+# Generated by GNU Autoconf 2.69 for clpAPI 1.2.13.
#
# Report bugs to <mayo.roettger@hhu.de>.
#
@@ -580,8 +580,8 @@ MAKEFLAGS=
# Identity of this package.
PACKAGE_NAME='clpAPI'
PACKAGE_TARNAME='clpapi'
-PACKAGE_VERSION='1.2.11'
-PACKAGE_STRING='clpAPI 1.2.11'
+PACKAGE_VERSION='1.2.13'
+PACKAGE_STRING='clpAPI 1.2.13'
PACKAGE_BUGREPORT='mayo.roettger@hhu.de'
PACKAGE_URL=''
@@ -1242,7 +1242,7 @@ if test "$ac_init_help" = "long"; then
# Omit some internal or obsolete options to make the list less imposing.
# This message is too long to be a string in the A/UX 3.1 sh.
cat <<_ACEOF
-\`configure' configures clpAPI 1.2.11 to adapt to many kinds of systems.
+\`configure' configures clpAPI 1.2.13 to adapt to many kinds of systems.
Usage: $0 [OPTION]... [VAR=VALUE]...
@@ -1304,7 +1304,7 @@ fi
if test -n "$ac_init_help"; then
case $ac_init_help in
- short | recursive ) echo "Configuration of clpAPI 1.2.11:";;
+ short | recursive ) echo "Configuration of clpAPI 1.2.13:";;
esac
cat <<\_ACEOF
@@ -1392,7 +1392,7 @@ fi
test -n "$ac_init_help" && exit $ac_status
if $ac_init_version; then
cat <<\_ACEOF
-clpAPI configure 1.2.11
+clpAPI configure 1.2.13
generated by GNU Autoconf 2.69
Copyright (C) 2012 Free Software Foundation, Inc.
@@ -1694,7 +1694,7 @@ cat >config.log <<_ACEOF
This file contains any messages produced by compilers while
running configure, to aid debugging if configure makes a mistake.
-It was created by clpAPI $as_me 1.2.11, which was
+It was created by clpAPI $as_me 1.2.13, which was
generated by GNU Autoconf 2.69. Invocation command line was
$ $0 $@
@@ -2059,7 +2059,6 @@ if test -z "${R_HOME}"; then
fi
CC=`"${R_HOME}/bin/R" CMD config CC`
-#CPP=`"${R_HOME}/bin/R" CMD config CPP`
CFLAGS=`"${R_HOME}/bin/R" CMD config CFLAGS`
CPPFLAGS=`"${R_HOME}/bin/R" CMD config CPPFLAGS`
ac_ext=c
@@ -4252,7 +4251,7 @@ cat >>$CONFIG_STATUS <<\_ACEOF || ac_write_fail=1
# report actual input values of CONFIG_FILES etc. instead of their
# values after options handling.
ac_log="
-This file was extended by clpAPI $as_me 1.2.11, which was
+This file was extended by clpAPI $as_me 1.2.13, which was
generated by GNU Autoconf 2.69. Invocation command line was
CONFIG_FILES = $CONFIG_FILES
@@ -4314,7 +4313,7 @@ _ACEOF
cat >>$CONFIG_STATUS <<_ACEOF || ac_write_fail=1
ac_cs_config="`$as_echo "$ac_configure_args" | sed 's/^ //; s/[\\""\`\$]/\\\\&/g'`"
ac_cs_version="\\
-clpAPI config.status 1.2.11
+clpAPI config.status 1.2.13
configured by $0, generated by GNU Autoconf 2.69,
with options \\"\$ac_cs_config\\"
diff --git a/configure.ac b/configure.ac
index 3c39d1e5467107360859f8d94e270bb55d7090ca..c9ec3eb83a0fd9dbab1061e90fd97907899c9c59 100755
--- a/configure.ac
+++ b/configure.ac
@@ -1,4 +1,4 @@
-AC_INIT([clpAPI], [1.2.11], [mayo.roettger@hhu.de])
+AC_INIT([clpAPI], [1.2.13], [mayo.roettger@hhu.de])
dnl # --------------------------------------------------------------------
dnl # template config.h.in
@@ -29,7 +29,6 @@ fi
dnl # GNU R default settings
CC=`"${R_HOME}/bin/R" CMD config CC`
-#CPP=`"${R_HOME}/bin/R" CMD config CPP`
CFLAGS=`"${R_HOME}/bin/R" CMD config CFLAGS`
CPPFLAGS=`"${R_HOME}/bin/R" CMD config CPPFLAGS`
AC_PROG_CC
diff --git a/inst/NEWS.Rd b/inst/NEWS.Rd
index ac878c8db2c713e87a2aa0c6476a85576d6b7f22..3743e4671b3f1875036bab488b26c9d700dd5ab6 100755
--- a/inst/NEWS.Rd
+++ b/inst/NEWS.Rd
@@ -4,7 +4,7 @@
\title{clpAPI News}
\encoding{UTF-8}
% ---------------------------------------------------------------------------- %
-\section{Changes in version 1.2.12 2020-02-13}{
+\section{Changes in version 1.2.13 2020-02-13}{
\itemize{
\item Quick fix for CRAN issue: 'config' variable 'CPP' is deprecated.
}