diff --git a/.gitignore b/.gitignore
new file mode 100644
index 0000000000000000000000000000000000000000..32358936d0b933fa577bc062610396a386202048
--- /dev/null
+++ b/.gitignore
@@ -0,0 +1,5 @@
+# ignore pdf files
+*.pdf
+
+# ignore build r package:
+sybil_*.tar.gz
diff --git a/DESCRIPTION b/DESCRIPTION
new file mode 100644
index 0000000000000000000000000000000000000000..6fc429cd293234bcd912ee9544a2831ec79efe53
--- /dev/null
+++ b/DESCRIPTION
@@ -0,0 +1,19 @@
+Package: clpAPI
+Type: Package
+Title: R Interface to C API of COIN-OR Clp
+Version: 1.2.6
+Date: 2013-10-26
+Authors@R: c(person("Gabriel", "Gelius-Dietrich", role = c("aut", "cre"), email = "geliudie@uni-duesseldorf.de"))
+Depends: R (>= 2.6.0)
+Imports: methods
+Description: R Interface to C API of COIN-OR Clp, depends on COIN-OR Clp Version >= 1.12.0
+SystemRequirements: COIN-OR Clp (>= 1.12.0)
+License: GPL-3
+LazyLoad: yes
+Collate: generics.R clp_ptrClass.R clp.R clpAPI.R zzz.R
+Packaged: 2013-10-26 16:15:58 UTC; gabriel
+Author: Gabriel Gelius-Dietrich [aut, cre]
+Maintainer: Gabriel Gelius-Dietrich <geliudie@uni-duesseldorf.de>
+NeedsCompilation: yes
+Repository: CRAN
+Date/Publication: 2013-10-26 19:08:53
diff --git a/MD5 b/MD5
new file mode 100644
index 0000000000000000000000000000000000000000..c35ad3dac8dada0ed39d4598e746bf2ac240586e
--- /dev/null
+++ b/MD5
@@ -0,0 +1,85 @@
+aed7f2b6574917b3d0ca688429b99065 *DESCRIPTION
+5daa14e3ff7a2270d741a3e781a8f987 *NAMESPACE
+00cd81844a47cfe6b42a5b2139d64c78 *R/clp.R
+3ce8923439c8c1b6b9d5a5b73eedc8c1 *R/clpAPI.R
+9732448f604c10e494f1786df44f0a62 *R/clp_ptrClass.R
+c28b18176d42d49363a806c626389214 *R/generics.R
+b92329cf50a482f5a473bcce316e5669 *R/zzz.R
+f7372a571a1b0690bfaf3bdb7b88c829 *build/vignette.rds
+661848692617a4273bc42814dec96764 *cleanup
+011ce44bdb6c566923d3f8473620a42a *configure
+c2209e4bff9ea976398c3587f4e13c38 *configure.ac
+d41d8cd98f00b204e9800998ecf8427e *configure.win
+ee6ae0f4273773b869f135cdc41a6ef1 *inst/INSTALL
+eb15b4cad6eef59a4ae92d53a44c24d0 *inst/NEWS.Rd
+e236783da143c26d795f14dd8021f981 *inst/README
+3952b2754f409d0fe85d390817441d03 *inst/c2r.map
+1e514bbcc73c999233af23fb78ae0f9a *inst/doc/clpAPI.R
+f932b68cee56631e482786a0e888fe45 *inst/doc/clpAPI.Rnw
+e9350415f9796cedd430ddbae49d06e8 *inst/doc/clpAPI.pdf
+6bb5e918e9243fc4d2404ae81576bf20 *man/addColsCLP.Rd
+3d7fc83d95f88caacb91ba6a894db11a *man/addRowsCLP.Rd
+ae29b572c5b913e0cee58e41f9c1a77b *man/chgColLowerCLP.Rd
+87cc07301c3cad4431b6a7a916787f93 *man/chgColUpperCLP.Rd
+3998d99207a7c1260723825664df6133 *man/chgObjCoefsCLP.Rd
+6bfa51e7bb325ac428f9270a028c8f7a *man/chgRowLowerCLP.Rd
+633054b25943786817eebc3642183c1c *man/chgRowUpperCLP.Rd
+84c9bba40b1ddfe90954903ce1fd3f6d *man/clpAPI-package.Rd
+49d588eb46fcebee1712674bb4f7d3aa *man/clpPtr-class.Rd
+fcf3a7ff8b53a3ec50c958c3d2166ca3 *man/copyNamesCLP.Rd
+659504f9c06c120f6c55517d63bf4994 *man/delColsCLP.Rd
+045ae82acdc295785959fd1e8db6cf5a *man/delProbCLP.Rd
+9c1d261b4d7a3e3b4375fe8e75cedf39 *man/delRowsCLP.Rd
+9cabdc8298f7370c21e15b513a0c7ca1 *man/dropNamesCLP.Rd
+012d88d845f835bfe2cfea4ba08a6e3d *man/dualCLP.Rd
+278341a1d5c00b1dbc8d7701ae0b8d86 *man/getColDualCLP.Rd
+a6d90e81c179278dbf6086646af4a366 *man/getColLowerCLP.Rd
+36a0fd7a47f52c73d59e82fd5857110d *man/getColPrimCLP.Rd
+80d47275b11ba6c766b7b164e411d0fc *man/getColUpperCLP.Rd
+f2f2fcd4e3c90634ab136b4627ae4b08 *man/getIndCLP.Rd
+68a872b9c42e981c3317f8f965af541f *man/getLogLevelCLP.Rd
+9162f07ae7aea48973cd93e1ee018d3e *man/getNnzCLP.Rd
+81f39e9aa5747819fd1f87f8a1c36d21 *man/getNumColsCLP.Rd
+fe178eb36ee4084fa25e21e56b04be92 *man/getNumNnzCLP.Rd
+e43df9658e7fbe8c631349bdc06c73ea *man/getNumRowsCLP.Rd
+7c577badd12b83de9afff5287619018b *man/getObjCoefsCLP.Rd
+faa9ce206e630ab2d33cfa7b3d3d9117 *man/getObjDirCLP.Rd
+4d8cc7aa9d96418f85633255fcf2867f *man/getObjValCLP.Rd
+869b586c8026d2ec8e703ea761d6630e *man/getRowDualCLP.Rd
+8212e338fbed580675f023fc6c477d3c *man/getRowLowerCLP.Rd
+c943286578d76fbf3761b0a30c7fecd4 *man/getRowPrimCLP.Rd
+57c2faa7f4443187dab2649912ed7688 *man/getRowUpperCLP.Rd
+72df7fd600abfc56ce19a11f84842402 *man/getScaleFlagCLP.Rd
+7b57d27e7160f754119e62a428ba27f3 *man/getSolStatusCLP.Rd
+fd66b1d0be60b2c2855c93bfebd584ff *man/getVecLenCLP.Rd
+4ae77953b088288d8b5c9c88e0e83446 *man/getVecStartCLP.Rd
+8f8ecad322db363f477c83c35fc09603 *man/idiotCLP.Rd
+6551a8a960f4462b59c34cdce1103161 *man/initProbCLP.Rd
+f38b36396c9aaf39189b160c40167b65 *man/lengthNamesCLP.Rd
+21aaec1dccf7fadd698c3da90bfd8d35 *man/loadMatrixCLP.Rd
+70b15fb57229f15409b540663e81c4fc *man/loadProblemCLP.Rd
+b52e0947a60ff6f1839a37d224a7a3df *man/primalCLP.Rd
+a01c1ad1bfac218ad53b3c3abf90a2e2 *man/printModelCLP.Rd
+a418a1cbfec3f1bdd4acf49f32f7b2e2 *man/probNameCLP.Rd
+13cbb298a95e03c13e895dcd72c7147b *man/readMPSCLP.Rd
+9870599290752fe1f5fbb51515c88151 *man/resizeCLP.Rd
+dc8d186dbdf094fb26aef82502d4871b *man/restoreModelCLP.Rd
+8f39cfcdbc1a927b83a8f1897865ed78 *man/return_codeCLP.Rd
+ebdf498e2559a65c19729a1a21c9e72b *man/saveModelCLP.Rd
+ff95f14cb153143c4addab443ab162c0 *man/scaleModelCLP.Rd
+e04ef106322792a2c83721d6cf20e0dd *man/setLogLevelCLP.Rd
+7411687c9940b4d378325078af8355c3 *man/setObjDirCLP.Rd
+cd6ee2d6da156be2d3b7938d1d787a87 *man/solveInitialBarrierCLP.Rd
+40bce1c1ba932f49b7b77b16b7210cb7 *man/solveInitialBarrierNoCrossCLP.Rd
+c49b476f94cfbfbeb8a93a8bc7083d0f *man/solveInitialCLP.Rd
+46cd2ee701fcdac1c2473b1072336e2d *man/solveInitialDualCLP.Rd
+f89b721b6ec8b260fe3cdb7024932030 *man/solveInitialPrimalCLP.Rd
+5724c8b0b98b6cf1bcc15bad70f87f5a *man/status_codeCLP.Rd
+fa89b81b2935b875d4230c3e2c1c2e25 *man/versionCLP.Rd
+e4cff70c399a10f65c797ddb9bfc2f65 *src/Makevars.in
+5e18cdf60e85c6ed074a9125868cef8d *src/Makevars.win
+80e01a59b216fbb14dd6b3b7aaa0f506 *src/clpAPI.c
+ebf775ae8f5797658db56f2e81349c14 *src/clpAPI.h
+f1ee63eab916e1506cb4af5fbcdddd5e *src/clpR.h
+2f0955cfb67608368cf62466a9d2226f *src/init.c
+f932b68cee56631e482786a0e888fe45 *vignettes/clpAPI.Rnw
diff --git a/NAMESPACE b/NAMESPACE
new file mode 100644
index 0000000000000000000000000000000000000000..cb546f186266591e1f4053f26e3a4a0453bee0ad
--- /dev/null
+++ b/NAMESPACE
@@ -0,0 +1,75 @@
+useDynLib(clpAPI)
+
+import(methods)
+
+exportClass("clpPtr")
+
+export(
+# methods
+"clpPointer",
+"clpPtrType",
+"clpPtrType<-",
+"isNULLpointerCLP",
+"isCLPpointer",
+# function names
+addColsCLP,
+addRowsCLP,
+chgColLowerCLP,
+chgColUpperCLP,
+chgObjCoefsCLP,
+chgRowLowerCLP,
+chgRowUpperCLP,
+#colNameCLP,
+copyNamesCLP,
+delColsCLP,
+delProbCLP,
+delRowsCLP,
+dualCLP,
+dropNamesCLP,
+getColDualCLP,
+getColLowerCLP,
+getColPrimCLP,
+getColUpperCLP,
+getIndCLP,
+getLogLevelCLP,
+getNnzCLP,
+getNumColsCLP,
+getNumNnzCLP,
+getNumRowsCLP,
+getObjCoefsCLP,
+getObjDirCLP,
+getObjValCLP,
+getRowDualCLP,
+getRowLowerCLP,
+getRowPrimCLP,
+getRowUpperCLP,
+getScaleFlagCLP,
+getSolStatusCLP,
+getVecLenCLP,
+getVecStartCLP,
+idiotCLP,
+initProbCLP,
+loadMatrixCLP,
+loadProblemCLP,
+lengthNamesCLP,
+primalCLP,
+printModelCLP,
+probNameCLP,
+readMPSCLP,
+resizeCLP,
+restoreModelCLP,
+return_codeCLP,
+#rowNameCLP,
+saveModelCLP,
+scaleModelCLP,
+setLogLevelCLP,
+setObjDirCLP,
+solveInitialBarrierCLP,
+solveInitialBarrierNoCrossCLP,
+solveInitialCLP,
+solveInitialDualCLP,
+solveInitialPrimalCLP,
+status_codeCLP,
+versionCLP
+)
+
diff --git a/R/clp.R b/R/clp.R
new file mode 100644
index 0000000000000000000000000000000000000000..513b62a9562d49056a093f0600e49898b349a5f4
--- /dev/null
+++ b/R/clp.R
@@ -0,0 +1,48 @@
+#------------------------------------------------------------------------------#
+# R interface to COIN-OR Clp #
+#------------------------------------------------------------------------------#
+
+# clp.R
+# R interface to COIN-OR Clp.
+#
+# Copyright (C) 2011-2013 Gabriel Gelius-Dietrich, Dpt. for Bioinformatics,
+# Institute for Informatics, Heinrich-Heine-University, Duesseldorf, Germany.
+# All right reserved.
+# Email: geliudie@uni-duesseldorf.de
+#
+# This file is part of clpAPI.
+#
+# ClpAPI is free software: you can redistribute it and/or modify
+# it under the terms of the GNU General Public License as published by
+# the Free Software Foundation, either version 3 of the License, or
+# (at your option) any later version.
+#
+# ClpAPI is distributed in the hope that it will be useful,
+# but WITHOUT ANY WARRANTY; without even the implied warranty of
+# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+# GNU General Public License for more details.
+#
+# You should have received a copy of the GNU General Public License
+# along with clpAPI If not, see <http://www.gnu.org/licenses/>.
+
+
+#------------------------------------------------------------------------------#
+
+# return codes of clp optimizations
+return_codeCLP <- function(code) {
+ if (code == 0) { return( "solution process was successful" ) }
+ else { return(paste("Failed to obtain solution, unknown error code:", code)) }
+}
+
+
+# solution status codes of clp optimizations
+status_codeCLP <- function(code) {
+ if (code == 0) { return( "solution is optimal" ) }
+ else if (code == 1) { return( "solution is primal infeasible" ) }
+ else if (code == 2) { return( "solution is dual infeasible" ) }
+ else if (code == 3) { return( "stopped on iterations etc" ) }
+ else if (code == 4) { return( "stopped due to errors" ) }
+ else { return(paste("unknown status code:", code)) }
+}
+
+
diff --git a/R/clpAPI.R b/R/clpAPI.R
new file mode 100644
index 0000000000000000000000000000000000000000..95644a57180eacdae8cb2422a990d3a0105b9d98
--- /dev/null
+++ b/R/clpAPI.R
@@ -0,0 +1,830 @@
+#------------------------------------------------------------------------------#
+# R interface to COIN-OR Clp #
+#------------------------------------------------------------------------------#
+
+# clpAPI.R
+# R interface to COIN-OR Clp.
+#
+# Copyright (C) 2011-2013 Gabriel Gelius-Dietrich, Dpt. for Bioinformatics,
+# Institute for Informatics, Heinrich-Heine-University, Duesseldorf, Germany.
+# All right reserved.
+# Email: geliudie@uni-duesseldorf.de
+#
+# This file is part of clpAPI.
+#
+# ClpAPI is free software: you can redistribute it and/or modify
+# it under the terms of the GNU General Public License as published by
+# the Free Software Foundation, either version 3 of the License, or
+# (at your option) any later version.
+#
+# ClpAPI is distributed in the hope that it will be useful,
+# but WITHOUT ANY WARRANTY; without even the implied warranty of
+# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+# GNU General Public License for more details.
+#
+# You should have received a copy of the GNU General Public License
+# along with clpAPI If not, see <http://www.gnu.org/licenses/>.
+
+
+#------------------------------------------------------------------------------#
+# the interface #
+#------------------------------------------------------------------------------#
+
+
+#------------------------------------------------------------------------------#
+
+delProbCLP <- function(lp) {
+
+ invisible(.Call("delProb", clpPointer(lp), PACKAGE = "clpAPI"))
+
+}
+
+
+#------------------------------------------------------------------------------#
+
+initProbCLP <- function(ptrtype = "clp_prob") {
+ lp <- .Call("initProb", PACKAGE = "clpAPI",
+ as.character(ptrtype)
+ )
+
+ lpP <- clp_Pointer(lp)
+
+ return(lpP)
+}
+
+
+#------------------------------------------------------------------------------#
+
+setObjDirCLP <- function(lp, lpdir) {
+
+ invisible(
+ .Call("setObjDir", PACKAGE = "clpAPI",
+ clpPointer(lp),
+ as.numeric(lpdir)
+ )
+ )
+
+}
+
+
+#------------------------------------------------------------------------------#
+
+getObjDirCLP <- function(lp) {
+
+ lpdir <- .Call("getObjDir", PACKAGE = "clpAPI",
+ clpPointer(lp)
+ )
+ return(lpdir)
+
+}
+
+
+#------------------------------------------------------------------------------#
+
+resizeCLP <- function(lp, nrows, ncols) {
+
+ invisible(
+ .Call("resize", PACKAGE = "clpAPI",
+ clpPointer(lp),
+ as.integer(nrows),
+ as.integer(ncols)
+ )
+ )
+
+}
+
+
+#------------------------------------------------------------------------------#
+
+addRowsCLP <- function(lp, nrows, lb, ub, rowst, cols, val) {
+
+ invisible(
+ .Call("addRows", PACKAGE = "clpAPI",
+ clpPointer(lp),
+ as.integer(nrows),
+ as.numeric(lb),
+ as.numeric(ub),
+ as.integer(rowst),
+ as.integer(cols),
+ as.numeric(val)
+ )
+ )
+
+}
+
+
+#------------------------------------------------------------------------------#
+
+addColsCLP <- function(lp, ncols, lb, ub, obj, colst, rows, val) {
+
+ invisible(
+ .Call("addCols", PACKAGE = "clpAPI",
+ clpPointer(lp),
+ as.integer(ncols),
+ as.numeric(lb),
+ as.numeric(ub),
+ as.numeric(obj),
+ as.integer(colst),
+ as.integer(rows),
+ as.numeric(val)
+ )
+ )
+
+}
+
+
+#------------------------------------------------------------------------------#
+
+getNumRowsCLP <- function(lp) {
+
+ nrows <- .Call("getNumRows", PACKAGE = "clpAPI",
+ clpPointer(lp)
+ )
+ return(nrows)
+
+}
+
+
+#------------------------------------------------------------------------------#
+
+getNumColsCLP <- function(lp) {
+
+ ncols <- .Call("getNumCols", PACKAGE = "clpAPI",
+ clpPointer(lp)
+ )
+ return(ncols)
+
+}
+
+
+#------------------------------------------------------------------------------#
+
+chgObjCoefsCLP <- function(lp, objCoef) {
+
+ invisible(
+ .Call("chgObjCoefs", PACKAGE = "clpAPI",
+ clpPointer(lp),
+ as.numeric(objCoef)
+ )
+ )
+
+}
+
+
+#------------------------------------------------------------------------------#
+
+getObjCoefsCLP <- function(lp) {
+
+ objCoefs <- .Call("getObjCoefs", PACKAGE = "clpAPI",
+ clpPointer(lp)
+ )
+ return(objCoefs)
+
+}
+
+
+#------------------------------------------------------------------------------#
+
+chgRowLowerCLP <- function(lp, rlb) {
+
+ invisible(
+ .Call("chgRowLower", PACKAGE = "clpAPI",
+ clpPointer(lp),
+ as.numeric(rlb)
+ )
+ )
+
+}
+
+
+#------------------------------------------------------------------------------#
+
+getRowLowerCLP <- function(lp) {
+
+ rlb <- .Call("getRowLower", PACKAGE = "clpAPI",
+ clpPointer(lp)
+ )
+ return(rlb)
+
+}
+
+
+#------------------------------------------------------------------------------#
+
+chgRowUpperCLP <- function(lp, rub) {
+
+ invisible(
+ .Call("chgRowUpper", PACKAGE = "clpAPI",
+ clpPointer(lp),
+ as.numeric(rub)
+ )
+ )
+
+}
+
+
+#------------------------------------------------------------------------------#
+
+getRowUpperCLP <- function(lp) {
+
+ rub <- .Call("getRowUpper", PACKAGE = "clpAPI",
+ clpPointer(lp)
+ )
+ return(rub)
+
+}
+
+
+#------------------------------------------------------------------------------#
+
+chgColLowerCLP <- function(lp, lb) {
+
+ invisible(
+ .Call("chgColLower", PACKAGE = "clpAPI",
+ clpPointer(lp),
+ as.numeric(lb)
+ )
+ )
+
+}
+
+
+#------------------------------------------------------------------------------#
+
+getColLowerCLP <- function(lp) {
+
+ lb <- .Call("getColLower", PACKAGE = "clpAPI",
+ clpPointer(lp)
+ )
+ return(lb)
+
+}
+
+
+#------------------------------------------------------------------------------#
+
+chgColUpperCLP <- function(lp, ub) {
+
+ invisible(
+ .Call("chgColUpper", PACKAGE = "clpAPI",
+ clpPointer(lp),
+ as.numeric(ub)
+ )
+ )
+
+}
+
+
+#------------------------------------------------------------------------------#
+
+getColUpperCLP <- function(lp) {
+
+ ub <- .Call("getColUpper", PACKAGE = "clpAPI",
+ clpPointer(lp)
+ )
+ return(ub)
+
+}
+
+
+#------------------------------------------------------------------------------#
+
+loadProblemCLP <- function(lp, ncols, nrows, ia, ja, ra,
+ lb = NULL, ub = NULL,
+ obj_coef = NULL, rlb = NULL, rub = NULL) {
+
+ if (is.null(lb)) {
+ Clb <- as.null(lb)
+ }
+ else {
+ Clb <- as.numeric(lb)
+ }
+
+ if (is.null(ub)) {
+ Cub <- as.null(ub)
+ }
+ else {
+ Cub <- as.numeric(ub)
+ }
+
+ if (is.null(obj_coef)) {
+ Cobj_coef <- as.null(obj_coef)
+ }
+ else {
+ Cobj_coef <- as.numeric(obj_coef)
+ }
+
+ if (is.null(rlb)) {
+ Crlb <- as.null(rlb)
+ }
+ else {
+ Crlb <- as.numeric(rlb)
+ }
+
+ if (is.null(rub)) {
+ Crub <- as.null(rub)
+ }
+ else {
+ Crub <- as.numeric(rub)
+ }
+
+ invisible(
+ .Call("loadProblem", PACKAGE = "clpAPI",
+ clpPointer(lp),
+ as.integer(ncols),
+ as.integer(nrows),
+ as.integer(ia),
+ as.integer(ja),
+ as.numeric(ra),
+ Clb,
+ Cub,
+ Cobj_coef,
+ Crlb,
+ Crub
+# as.numeric(lb),
+# as.numeric(ub),
+# as.numeric(obj_coef),
+# as.numeric(rlb),
+# as.numeric(rub)
+ )
+ )
+
+}
+
+
+#------------------------------------------------------------------------------#
+
+loadMatrixCLP <- function(lp, ncols, nrows, ia, ja, ra) {
+
+ invisible(
+ .Call("loadMatrix", PACKAGE = "clpAPI",
+ clpPointer(lp),
+ as.integer(ncols),
+ as.integer(nrows),
+ as.integer(ia),
+ as.integer(ja),
+ as.numeric(ra)
+ )
+ )
+
+}
+
+
+#------------------------------------------------------------------------------#
+
+getNumNnzCLP <- function(lp) {
+
+ nnz <- .Call("getNumNnz", PACKAGE = "clpAPI",
+ clpPointer(lp)
+ )
+ return(nnz)
+
+}
+
+
+#------------------------------------------------------------------------------#
+
+getVecStartCLP <- function(lp) {
+
+ vec_start <- .Call("getVecStart", PACKAGE = "clpAPI",
+ clpPointer(lp)
+ )
+ return(vec_start)
+
+}
+
+
+#------------------------------------------------------------------------------#
+
+getIndCLP <- function(lp) {
+
+ index <- .Call("getInd", PACKAGE = "clpAPI",
+ clpPointer(lp)
+ )
+ return(index)
+
+}
+
+
+#------------------------------------------------------------------------------#
+
+getVecLenCLP <- function(lp) {
+
+ vec_len <- .Call("getVecLen", PACKAGE = "clpAPI",
+ lp
+ )
+ return(vec_len)
+
+}
+
+
+#------------------------------------------------------------------------------#
+
+getNnzCLP <- function(lp) {
+
+ n_elem <- .Call("getNnz", PACKAGE = "clpAPI",
+ clpPointer(lp)
+ )
+ return(n_elem)
+
+}
+
+
+#------------------------------------------------------------------------------#
+
+printModelCLP <- function(lp, prefix = "CLPmodel") {
+
+ invisible(
+ .Call("printModel", PACKAGE = "clpAPI",
+ clpPointer(lp),
+ as.character(prefix)
+ )
+ )
+
+}
+
+
+#------------------------------------------------------------------------------#
+
+setLogLevelCLP <- function(lp, amount) {
+
+ invisible(
+ .Call("setLogLevel", PACKAGE = "clpAPI",
+ clpPointer(lp),
+ as.integer(amount)
+ )
+ )
+
+}
+
+
+#------------------------------------------------------------------------------#
+
+getLogLevelCLP <- function(lp) {
+
+ amount <- .Call("getLogLevel", PACKAGE = "clpAPI",
+ clpPointer(lp)
+ )
+ return(amount)
+
+}
+
+
+#------------------------------------------------------------------------------#
+
+scaleModelCLP <- function(lp, mode) {
+
+ invisible(
+ .Call("scaleModel", PACKAGE = "clpAPI",
+ clpPointer(lp),
+ as.integer(mode)
+ )
+ )
+
+}
+
+
+#------------------------------------------------------------------------------#
+
+getScaleFlagCLP <- function(lp) {
+
+ flag <- .Call("getScaleFlag", PACKAGE = "clpAPI",
+ clpPointer(lp)
+ )
+ return(flag)
+
+}
+
+
+#------------------------------------------------------------------------------#
+
+solveInitialCLP <- function(lp) {
+
+ ret <- .Call("solveInitial", PACKAGE = "clpAPI",
+ clpPointer(lp)
+ )
+ return(ret)
+
+}
+
+
+#------------------------------------------------------------------------------#
+
+solveInitialDualCLP <- function(lp) {
+
+ ret <- .Call("solveInitialDual", PACKAGE = "clpAPI",
+ clpPointer(lp)
+ )
+ return(ret)
+
+}
+
+
+#------------------------------------------------------------------------------#
+
+solveInitialPrimalCLP <- function(lp) {
+
+ ret <- .Call("solveInitialPrimal", PACKAGE = "clpAPI",
+ clpPointer(lp)
+ )
+ return(ret)
+
+}
+
+
+#------------------------------------------------------------------------------#
+
+solveInitialBarrierCLP <- function(lp) {
+
+ ret <- .Call("solveInitialBarrier", PACKAGE = "clpAPI",
+ clpPointer(lp)
+ )
+ return(ret)
+
+}
+
+
+#------------------------------------------------------------------------------#
+
+solveInitialBarrierNoCrossCLP <- function(lp) {
+
+ ret <- .Call("solveInitialBarrierNoCross", PACKAGE = "clpAPI",
+ clpPointer(lp)
+ )
+ return(ret)
+
+}
+
+
+#------------------------------------------------------------------------------#
+
+dualCLP <- function(lp, ifValP = 0) {
+
+ ret <- .Call("dual", PACKAGE = "clpAPI",
+ clpPointer(lp),
+ as.integer(ifValP)
+ )
+ return(ret)
+
+}
+
+
+#------------------------------------------------------------------------------#
+
+primalCLP <- function(lp, ifValP = 0) {
+
+ ret <- .Call("primal", PACKAGE = "clpAPI",
+ clpPointer(lp),
+ as.integer(ifValP)
+ )
+ return(ret)
+
+}
+
+
+#------------------------------------------------------------------------------#
+
+idiotCLP <- function(lp, thd = 0) {
+
+ invisible(
+ .Call("idiot", PACKAGE = "clpAPI",
+ clpPointer(lp),
+ as.integer(thd)
+ )
+ )
+
+}
+
+
+#------------------------------------------------------------------------------#
+
+getSolStatusCLP <- function(lp) {
+
+ stat <- .Call("getSolStatus", PACKAGE = "clpAPI",
+ clpPointer(lp)
+ )
+ return(stat)
+
+}
+
+
+#------------------------------------------------------------------------------#
+
+getObjValCLP <- function(lp) {
+
+ obj <- .Call("getObjVal", PACKAGE = "clpAPI",
+ clpPointer(lp)
+ )
+ return(obj)
+
+}
+
+
+#------------------------------------------------------------------------------#
+
+getColPrimCLP <- function(lp) {
+
+ col_prim <- .Call("getColPrim", clpPointer(lp), PACKAGE = "clpAPI")
+
+ return(col_prim)
+
+}
+
+
+#------------------------------------------------------------------------------#
+
+getColDualCLP <- function(lp) {
+
+ col_dual <- .Call("getColDual", clpPointer(lp), PACKAGE = "clpAPI")
+
+ return(col_dual)
+
+}
+
+
+#------------------------------------------------------------------------------#
+
+getRowPrimCLP <- function(lp) {
+
+ row_prim <- .Call("getRowPrim", clpPointer(lp), PACKAGE = "clpAPI")
+
+ return(row_prim)
+
+}
+
+
+#------------------------------------------------------------------------------#
+
+getRowDualCLP <- function(lp) {
+
+ row_dual <- .Call("getRowDual", clpPointer(lp), PACKAGE = "clpAPI")
+
+ return(row_dual)
+
+}
+
+
+#------------------------------------------------------------------------------#
+
+delRowsCLP <- function(lp, num, i) {
+
+ invisible(
+ .Call("delRows", PACKAGE = "clpAPI",
+ clpPointer(lp),
+ as.integer(num),
+ as.integer(i)
+ )
+ )
+
+}
+
+
+#------------------------------------------------------------------------------#
+
+delColsCLP <- function(lp, num, j) {
+
+ invisible(
+ .Call("delCols", PACKAGE = "clpAPI",
+ clpPointer(lp),
+ as.integer(num),
+ as.integer(j)
+ )
+ )
+
+}
+
+
+#------------------------------------------------------------------------------#
+
+readMPSCLP <- function(lp, fname, keepNames = TRUE, ignoreErrors = FALSE) {
+
+ check <- .Call("readMPS", PACKAGE = "clpAPI",
+ clpPointer(lp),
+ as.character(fname),
+ as.integer(keepNames),
+ as.integer(ignoreErrors)
+ )
+ return(check)
+
+}
+
+
+#------------------------------------------------------------------------------#
+
+saveModelCLP <- function(lp, fname) {
+
+ check <- .Call("saveModel", PACKAGE = "clpAPI",
+ clpPointer(lp),
+ as.character(fname)
+ )
+ return(check)
+
+}
+
+
+#------------------------------------------------------------------------------#
+
+restoreModelCLP <- function(lp, fname) {
+
+ check <- .Call("restoreModel", PACKAGE = "clpAPI",
+ clpPointer(lp),
+ as.character(fname)
+ )
+ return(check)
+
+}
+
+
+#------------------------------------------------------------------------------#
+
+versionCLP <- function() {
+
+ version <- .Call("version", PACKAGE = "clpAPI")
+ return(version)
+
+}
+
+
+#------------------------------------------------------------------------------#
+
+dropNamesCLP <- function(lp) {
+
+ invisible(
+ .Call("dropNames", PACKAGE = "clpAPI",
+ clpPointer(lp)
+ )
+ )
+
+}
+
+
+#------------------------------------------------------------------------------#
+
+copyNamesCLP <- function(lp, cnames, rnames) {
+
+ invisible(
+ .Call("copyNames", PACKAGE = "clpAPI",
+ clpPointer(lp),
+ as.character(cnames),
+ as.character(rnames)
+ )
+ )
+
+}
+
+
+#------------------------------------------------------------------------------#
+
+lengthNamesCLP <- function(lp) {
+
+ nnames <- .Call("lengthNames", PACKAGE = "clpAPI",
+ clpPointer(lp)
+ )
+ return(nnames)
+
+}
+
+
+#------------------------------------------------------------------------------#
+
+rowNameCLP <- function(lp, i, rname) {
+
+ invisible(
+ .Call("rowName", PACKAGE = "clpAPI",
+ clpPointer(lp),
+ as.integer(i),
+ as.character(rname)
+ )
+ )
+
+}
+
+
+#------------------------------------------------------------------------------#
+
+colNameCLP <- function(lp, j, cname) {
+
+ invisible(
+ .Call("colName", PACKAGE = "clpAPI",
+ clpPointer(lp),
+ as.integer(j),
+ as.character(cname)
+ )
+ )
+
+}
+
+
+#------------------------------------------------------------------------------#
+
+probNameCLP <- function(lp, pname) {
+
+ invisible(
+ .Call("probName", PACKAGE = "clpAPI",
+ clpPointer(lp),
+ as.integer(nchar(pname)),
+ as.character(pname)
+ )
+ )
+
+}
diff --git a/R/clp_ptrClass.R b/R/clp_ptrClass.R
new file mode 100644
index 0000000000000000000000000000000000000000..b48eaf8144fb4b980a9d3121fb8a8bf1dc015134
--- /dev/null
+++ b/R/clp_ptrClass.R
@@ -0,0 +1,161 @@
+#------------------------------------------------------------------------------#
+# R interface to COIN-OR Clp #
+#------------------------------------------------------------------------------#
+
+# clp_ptrClass.R
+# R interface to COIN-OR Clp.
+#
+# Copyright (C) 2011-2013 Gabriel Gelius-Dietrich, Dpt. for Bioinformatics,
+# Institute for Informatics, Heinrich-Heine-University, Duesseldorf, Germany.
+# All right reserved.
+# Email: geliudie@uni-duesseldorf.de
+#
+# This file is part of clpAPI.
+#
+# ClpAPI is free software: you can redistribute it and/or modify
+# it under the terms of the GNU General Public License as published by
+# the Free Software Foundation, either version 3 of the License, or
+# (at your option) any later version.
+#
+# ClpAPI is distributed in the hope that it will be useful,
+# but WITHOUT ANY WARRANTY; without even the implied warranty of
+# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+# GNU General Public License for more details.
+#
+# You should have received a copy of the GNU General Public License
+# along with clpAPI If not, see <http://www.gnu.org/licenses/>.
+
+
+#------------------------------------------------------------------------------#
+# definition of class clpPtr #
+#------------------------------------------------------------------------------#
+
+
+# representation of class clpPtr
+setClass(Class = "clpPtr",
+ representation(
+ clpPtrType = "character",
+ clpPointer = "externalptr"
+ )
+ #, contains = "externalptr"
+)
+
+
+#------------------------------------------------------------------------------#
+
+# contructor for class clpPtr
+setMethod(f = "initialize",
+ signature = "clpPtr",
+ definition = function(.Object, p, w) {
+
+ .Object@clpPointer <- attr(p, which = w, exact = TRUE)
+ .Object@clpPtrType <- as.character(p)
+
+ return(.Object)
+
+ }
+)
+
+
+# contructor for pointers to clp problem structures
+clp_Pointer <- function(pointer) {
+
+ if (is(pointer, "clp_ptr")) {
+ pObj <- new("clpPtr",
+ p = pointer,
+ w = as.character("clp_ptr"))
+ }
+ else {
+ pObj <- pointer
+ }
+
+ return(pObj)
+}
+
+
+#------------------------------------------------------------------------------#
+
+# clpPtrType
+setMethod("clpPtrType", signature(object = "clpPtr"),
+ function(object) {
+ return(object@clpPtrType)
+ }
+)
+
+setReplaceMethod("clpPtrType", signature = (object = "clpPtr"),
+ function(object, value) {
+ object@clpPtrType <- value
+ return(object)
+ }
+)
+
+
+# clpPointer
+setMethod("clpPointer", signature(object = "clpPtr"),
+ function(object) {
+ return(object@clpPointer)
+ }
+)
+
+
+#------------------------------------------------------------------------------#
+
+setMethod("isNULLpointerCLP", signature(object = "clpPtr"),
+ function(object) {
+ return(.Call("isNULLptr", PACKAGE = "clpAPI", clpPointer(object)))
+ }
+)
+
+setMethod("isCLPpointer", signature(object = "clpPtr"),
+ function(object) {
+ return(.Call("isCLPptr", PACKAGE = "clpAPI", clpPointer(object)))
+ }
+)
+
+
+#------------------------------------------------------------------------------#
+
+setMethod("show", signature(object = "clpPtr"),
+ function(object) {
+
+ nc <- NA
+
+ if (isNULLpointerCLP(object)) {
+ ptrtype <- "NULL"
+ }
+ else {
+ if (isCLPpointer(object)) {
+ ptrtype <- "COIN-OR Clp problem object"
+ nc <- getNumColsCLP(object)
+ }
+ else {
+ ptrtype <- "unknown"
+ }
+ }
+
+ cat("object of class ", dQuote("clpPtr"),
+ ": pointer to ", ptrtype, ".\n", sep = "")
+
+ if (!is.na(nc)) {
+ if ( (nc < 1) || (nc > 10) ) {
+ cat(paste("Number of variables: ",
+ getNumColsCLP(object), "\n"))
+ cat(paste("Number of constraints:",
+ getNumRowsCLP(object), "\n"))
+ }
+ else {
+ # make a more illustrative method here
+ cat(paste("Number of variables: ",
+ getNumColsCLP(object), "\n"))
+ cat(paste("Number of constraints:",
+ getNumRowsCLP(object), "\n"))
+ }
+ }
+
+ cat(paste("Slot ",
+ dQuote("clpPtrType"), ": ",
+ clpPtrType(object), "\n", sep = ""))
+ cat(paste("Slot ", dQuote("clpPointer"), ": ", sep = ""))
+ print(slot(object, "clpPointer"), sep = "")
+ }
+)
diff --git a/R/generics.R b/R/generics.R
new file mode 100644
index 0000000000000000000000000000000000000000..0e65ad2d187fe5228ade6dbfd5dc6be45101e40a
--- /dev/null
+++ b/R/generics.R
@@ -0,0 +1,51 @@
+#------------------------------------------------------------------------------#
+# R interface to COIN-OR Clp #
+#------------------------------------------------------------------------------#
+
+# generics.R
+# R interface to COIN-OR Clp.
+#
+# Copyright (C) 2011-2013 Gabriel Gelius-Dietrich, Dpt. for Bioinformatics,
+# Institute for Informatics, Heinrich-Heine-University, Duesseldorf, Germany.
+# All right reserved.
+# Email: geliudie@uni-duesseldorf.de
+#
+# This file is part of clpAPI.
+#
+# ClpAPI is free software: you can redistribute it and/or modify
+# it under the terms of the GNU General Public License as published by
+# the Free Software Foundation, either version 3 of the License, or
+# (at your option) any later version.
+#
+# ClpAPI is distributed in the hope that it will be useful,
+# but WITHOUT ANY WARRANTY; without even the implied warranty of
+# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+# GNU General Public License for more details.
+#
+# You should have received a copy of the GNU General Public License
+# along with clpAPI If not, see <http://www.gnu.org/licenses/>.
+
+
+#------------------------------------------------------------------------------#
+# generics #
+#------------------------------------------------------------------------------#
+
+setGeneric(name = "clpPointer",
+ def = function(object) { standardGeneric("clpPointer") }
+)
+
+setGeneric(name = "clpPtrType",
+ def = function(object) { standardGeneric("clpPtrType") }
+)
+setGeneric(name = "clpPtrType<-",
+ def = function(object, value) { standardGeneric("clpPtrType<-") }
+)
+
+setGeneric(name = "isNULLpointerCLP",
+ def = function(object) { standardGeneric("isNULLpointerCLP") }
+)
+
+setGeneric(name = "isCLPpointer",
+ def = function(object) { standardGeneric("isCLPpointer") }
+)
+
diff --git a/R/zzz.R b/R/zzz.R
new file mode 100644
index 0000000000000000000000000000000000000000..5cee061e7ae013d4e85bfec46bffde253d801532
--- /dev/null
+++ b/R/zzz.R
@@ -0,0 +1,37 @@
+#------------------------------------------------------------------------------#
+# R interface to COIN-OR Clp #
+#------------------------------------------------------------------------------#
+
+# zzz.R
+# R interface to COIN-OR Clp.
+#
+# Copyright (C) 2011-2013 Gabriel Gelius-Dietrich, Dpt. for Bioinformatics,
+# Institute for Informatics, Heinrich-Heine-University, Duesseldorf, Germany.
+# All right reserved.
+# Email: geliudie@uni-duesseldorf.de
+#
+# This file is part of clpAPI.
+#
+# ClpAPI is free software: you can redistribute it and/or modify
+# it under the terms of the GNU General Public License as published by
+# the Free Software Foundation, either version 3 of the License, or
+# (at your option) any later version.
+#
+# ClpAPI is distributed in the hope that it will be useful,
+# but WITHOUT ANY WARRANTY; without even the implied warranty of
+# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+# GNU General Public License for more details.
+#
+# You should have received a copy of the GNU General Public License
+# along with clpAPI If not, see <http://www.gnu.org/licenses/>.
+
+
+.packageName <- "clpAPI"
+
+.onLoad <- function(libname, pkgname) {
+ .Call("initCLP", PACKAGE = "clpAPI")
+}
+
+.onAttach <- function(libname, pkgname) {
+ packageStartupMessage("using COIN OR Clp version ", versionCLP())
+}
diff --git a/build/vignette.rds b/build/vignette.rds
new file mode 100644
index 0000000000000000000000000000000000000000..9b3d47b9fee20a56b8653f9b47f7d2a1babf978d
Binary files /dev/null and b/build/vignette.rds differ
diff --git a/cleanup b/cleanup
new file mode 100755
index 0000000000000000000000000000000000000000..f34a53809d37aca8301396494144252c2bc48bca
--- /dev/null
+++ b/cleanup
@@ -0,0 +1,4 @@
+#! /bin/sh
+
+rm -rf autom4te.cache src/Makevars src/*.o
+exit 0
diff --git a/configure b/configure
new file mode 100755
index 0000000000000000000000000000000000000000..5ca8a22d1ea69950e131590b8833701a36fdaa31
--- /dev/null
+++ b/configure
@@ -0,0 +1,4798 @@
+#! /bin/sh
+# Guess values for system-dependent variables and create Makefiles.
+# Generated by GNU Autoconf 2.69 for clpAPI 1.2.6.
+#
+# Report bugs to <geliudie@uni-duesseldorf.de>.
+#
+#
+# Copyright (C) 1992-1996, 1998-2012 Free Software Foundation, Inc.
+#
+#
+# This configure script is free software; the Free Software Foundation
+# gives unlimited permission to copy, distribute and modify it.
+## -------------------- ##
+## M4sh Initialization. ##
+## -------------------- ##
+
+# Be more Bourne compatible
+DUALCASE=1; export DUALCASE # for MKS sh
+if test -n "${ZSH_VERSION+set}" && (emulate sh) >/dev/null 2>&1; then :
+ emulate sh
+ NULLCMD=:
+ # Pre-4.2 versions of Zsh do word splitting on ${1+"$@"}, which
+ # is contrary to our usage. Disable this feature.
+ alias -g '${1+"$@"}'='"$@"'
+ setopt NO_GLOB_SUBST
+else
+ case `(set -o) 2>/dev/null` in #(
+ *posix*) :
+ set -o posix ;; #(
+ *) :
+ ;;
+esac
+fi
+
+
+as_nl='
+'
+export as_nl
+# Printing a long string crashes Solaris 7 /usr/bin/printf.
+as_echo='\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\'
+as_echo=$as_echo$as_echo$as_echo$as_echo$as_echo
+as_echo=$as_echo$as_echo$as_echo$as_echo$as_echo$as_echo
+# Prefer a ksh shell builtin over an external printf program on Solaris,
+# but without wasting forks for bash or zsh.
+if test -z "$BASH_VERSION$ZSH_VERSION" \
+ && (test "X`print -r -- $as_echo`" = "X$as_echo") 2>/dev/null; then
+ as_echo='print -r --'
+ as_echo_n='print -rn --'
+elif (test "X`printf %s $as_echo`" = "X$as_echo") 2>/dev/null; then
+ as_echo='printf %s\n'
+ as_echo_n='printf %s'
+else
+ if test "X`(/usr/ucb/echo -n -n $as_echo) 2>/dev/null`" = "X-n $as_echo"; then
+ as_echo_body='eval /usr/ucb/echo -n "$1$as_nl"'
+ as_echo_n='/usr/ucb/echo -n'
+ else
+ as_echo_body='eval expr "X$1" : "X\\(.*\\)"'
+ as_echo_n_body='eval
+ arg=$1;
+ case $arg in #(
+ *"$as_nl"*)
+ expr "X$arg" : "X\\(.*\\)$as_nl";
+ arg=`expr "X$arg" : ".*$as_nl\\(.*\\)"`;;
+ esac;
+ expr "X$arg" : "X\\(.*\\)" | tr -d "$as_nl"
+ '
+ export as_echo_n_body
+ as_echo_n='sh -c $as_echo_n_body as_echo'
+ fi
+ export as_echo_body
+ as_echo='sh -c $as_echo_body as_echo'
+fi
+
+# The user is always right.
+if test "${PATH_SEPARATOR+set}" != set; then
+ PATH_SEPARATOR=:
+ (PATH='/bin;/bin'; FPATH=$PATH; sh -c :) >/dev/null 2>&1 && {
+ (PATH='/bin:/bin'; FPATH=$PATH; sh -c :) >/dev/null 2>&1 ||
+ PATH_SEPARATOR=';'
+ }
+fi
+
+
+# IFS
+# We need space, tab and new line, in precisely that order. Quoting is
+# there to prevent editors from complaining about space-tab.
+# (If _AS_PATH_WALK were called with IFS unset, it would disable word
+# splitting by setting IFS to empty value.)
+IFS=" "" $as_nl"
+
+# Find who we are. Look in the path if we contain no directory separator.
+as_myself=
+case $0 in #((
+ *[\\/]* ) as_myself=$0 ;;
+ *) as_save_IFS=$IFS; IFS=$PATH_SEPARATOR
+for as_dir in $PATH
+do
+ IFS=$as_save_IFS
+ test -z "$as_dir" && as_dir=.
+ test -r "$as_dir/$0" && as_myself=$as_dir/$0 && break
+ done
+IFS=$as_save_IFS
+
+ ;;
+esac
+# We did not find ourselves, most probably we were run as `sh COMMAND'
+# in which case we are not to be found in the path.
+if test "x$as_myself" = x; then
+ as_myself=$0
+fi
+if test ! -f "$as_myself"; then
+ $as_echo "$as_myself: error: cannot find myself; rerun with an absolute file name" >&2
+ exit 1
+fi
+
+# Unset variables that we do not need and which cause bugs (e.g. in
+# pre-3.0 UWIN ksh). But do not cause bugs in bash 2.01; the "|| exit 1"
+# suppresses any "Segmentation fault" message there. '((' could
+# trigger a bug in pdksh 5.2.14.
+for as_var in BASH_ENV ENV MAIL MAILPATH
+do eval test x\${$as_var+set} = xset \
+ && ( (unset $as_var) || exit 1) >/dev/null 2>&1 && unset $as_var || :
+done
+PS1='$ '
+PS2='> '
+PS4='+ '
+
+# NLS nuisances.
+LC_ALL=C
+export LC_ALL
+LANGUAGE=C
+export LANGUAGE
+
+# CDPATH.
+(unset CDPATH) >/dev/null 2>&1 && unset CDPATH
+
+# Use a proper internal environment variable to ensure we don't fall
+ # into an infinite loop, continuously re-executing ourselves.
+ if test x"${_as_can_reexec}" != xno && test "x$CONFIG_SHELL" != x; then
+ _as_can_reexec=no; export _as_can_reexec;
+ # We cannot yet assume a decent shell, so we have to provide a
+# neutralization value for shells without unset; and this also
+# works around shells that cannot unset nonexistent variables.
+# Preserve -v and -x to the replacement shell.
+BASH_ENV=/dev/null
+ENV=/dev/null
+(unset BASH_ENV) >/dev/null 2>&1 && unset BASH_ENV ENV
+case $- in # ((((
+ *v*x* | *x*v* ) as_opts=-vx ;;
+ *v* ) as_opts=-v ;;
+ *x* ) as_opts=-x ;;
+ * ) as_opts= ;;
+esac
+exec $CONFIG_SHELL $as_opts "$as_myself" ${1+"$@"}
+# Admittedly, this is quite paranoid, since all the known shells bail
+# out after a failed `exec'.
+$as_echo "$0: could not re-execute with $CONFIG_SHELL" >&2
+as_fn_exit 255
+ fi
+ # We don't want this to propagate to other subprocesses.
+ { _as_can_reexec=; unset _as_can_reexec;}
+if test "x$CONFIG_SHELL" = x; then
+ as_bourne_compatible="if test -n \"\${ZSH_VERSION+set}\" && (emulate sh) >/dev/null 2>&1; then :
+ emulate sh
+ NULLCMD=:
+ # Pre-4.2 versions of Zsh do word splitting on \${1+\"\$@\"}, which
+ # is contrary to our usage. Disable this feature.
+ alias -g '\${1+\"\$@\"}'='\"\$@\"'
+ setopt NO_GLOB_SUBST
+else
+ case \`(set -o) 2>/dev/null\` in #(
+ *posix*) :
+ set -o posix ;; #(
+ *) :
+ ;;
+esac
+fi
+"
+ as_required="as_fn_return () { (exit \$1); }
+as_fn_success () { as_fn_return 0; }
+as_fn_failure () { as_fn_return 1; }
+as_fn_ret_success () { return 0; }
+as_fn_ret_failure () { return 1; }
+
+exitcode=0
+as_fn_success || { exitcode=1; echo as_fn_success failed.; }
+as_fn_failure && { exitcode=1; echo as_fn_failure succeeded.; }
+as_fn_ret_success || { exitcode=1; echo as_fn_ret_success failed.; }
+as_fn_ret_failure && { exitcode=1; echo as_fn_ret_failure succeeded.; }
+if ( set x; as_fn_ret_success y && test x = \"\$1\" ); then :
+
+else
+ exitcode=1; echo positional parameters were not saved.
+fi
+test x\$exitcode = x0 || exit 1
+test -x / || exit 1"
+ as_suggested=" as_lineno_1=";as_suggested=$as_suggested$LINENO;as_suggested=$as_suggested" as_lineno_1a=\$LINENO
+ as_lineno_2=";as_suggested=$as_suggested$LINENO;as_suggested=$as_suggested" as_lineno_2a=\$LINENO
+ eval 'test \"x\$as_lineno_1'\$as_run'\" != \"x\$as_lineno_2'\$as_run'\" &&
+ test \"x\`expr \$as_lineno_1'\$as_run' + 1\`\" = \"x\$as_lineno_2'\$as_run'\"' || exit 1
+test \$(( 1 + 1 )) = 2 || exit 1"
+ if (eval "$as_required") 2>/dev/null; then :
+ as_have_required=yes
+else
+ as_have_required=no
+fi
+ if test x$as_have_required = xyes && (eval "$as_suggested") 2>/dev/null; then :
+
+else
+ as_save_IFS=$IFS; IFS=$PATH_SEPARATOR
+as_found=false
+for as_dir in /bin$PATH_SEPARATOR/usr/bin$PATH_SEPARATOR$PATH
+do
+ IFS=$as_save_IFS
+ test -z "$as_dir" && as_dir=.
+ as_found=:
+ case $as_dir in #(
+ /*)
+ for as_base in sh bash ksh sh5; do
+ # Try only shells that exist, to save several forks.
+ as_shell=$as_dir/$as_base
+ if { test -f "$as_shell" || test -f "$as_shell.exe"; } &&
+ { $as_echo "$as_bourne_compatible""$as_required" | as_run=a "$as_shell"; } 2>/dev/null; then :
+ CONFIG_SHELL=$as_shell as_have_required=yes
+ if { $as_echo "$as_bourne_compatible""$as_suggested" | as_run=a "$as_shell"; } 2>/dev/null; then :
+ break 2
+fi
+fi
+ done;;
+ esac
+ as_found=false
+done
+$as_found || { if { test -f "$SHELL" || test -f "$SHELL.exe"; } &&
+ { $as_echo "$as_bourne_compatible""$as_required" | as_run=a "$SHELL"; } 2>/dev/null; then :
+ CONFIG_SHELL=$SHELL as_have_required=yes
+fi; }
+IFS=$as_save_IFS
+
+
+ if test "x$CONFIG_SHELL" != x; then :
+ export CONFIG_SHELL
+ # We cannot yet assume a decent shell, so we have to provide a
+# neutralization value for shells without unset; and this also
+# works around shells that cannot unset nonexistent variables.
+# Preserve -v and -x to the replacement shell.
+BASH_ENV=/dev/null
+ENV=/dev/null
+(unset BASH_ENV) >/dev/null 2>&1 && unset BASH_ENV ENV
+case $- in # ((((
+ *v*x* | *x*v* ) as_opts=-vx ;;
+ *v* ) as_opts=-v ;;
+ *x* ) as_opts=-x ;;
+ * ) as_opts= ;;
+esac
+exec $CONFIG_SHELL $as_opts "$as_myself" ${1+"$@"}
+# Admittedly, this is quite paranoid, since all the known shells bail
+# out after a failed `exec'.
+$as_echo "$0: could not re-execute with $CONFIG_SHELL" >&2
+exit 255
+fi
+
+ if test x$as_have_required = xno; then :
+ $as_echo "$0: This script requires a shell more modern than all"
+ $as_echo "$0: the shells that I found on your system."
+ if test x${ZSH_VERSION+set} = xset ; then
+ $as_echo "$0: In particular, zsh $ZSH_VERSION has bugs and should"
+ $as_echo "$0: be upgraded to zsh 4.3.4 or later."
+ else
+ $as_echo "$0: Please tell bug-autoconf@gnu.org and
+$0: geliudie@uni-duesseldorf.de about your system,
+$0: including any error possibly output before this
+$0: message. Then install a modern shell, or manually run
+$0: the script under such a shell if you do have one."
+ fi
+ exit 1
+fi
+fi
+fi
+SHELL=${CONFIG_SHELL-/bin/sh}
+export SHELL
+# Unset more variables known to interfere with behavior of common tools.
+CLICOLOR_FORCE= GREP_OPTIONS=
+unset CLICOLOR_FORCE GREP_OPTIONS
+
+## --------------------- ##
+## M4sh Shell Functions. ##
+## --------------------- ##
+# as_fn_unset VAR
+# ---------------
+# Portably unset VAR.
+as_fn_unset ()
+{
+ { eval $1=; unset $1;}
+}
+as_unset=as_fn_unset
+
+# as_fn_set_status STATUS
+# -----------------------
+# Set $? to STATUS, without forking.
+as_fn_set_status ()
+{
+ return $1
+} # as_fn_set_status
+
+# as_fn_exit STATUS
+# -----------------
+# Exit the shell with STATUS, even in a "trap 0" or "set -e" context.
+as_fn_exit ()
+{
+ set +e
+ as_fn_set_status $1
+ exit $1
+} # as_fn_exit
+
+# as_fn_mkdir_p
+# -------------
+# Create "$as_dir" as a directory, including parents if necessary.
+as_fn_mkdir_p ()
+{
+
+ case $as_dir in #(
+ -*) as_dir=./$as_dir;;
+ esac
+ test -d "$as_dir" || eval $as_mkdir_p || {
+ as_dirs=
+ while :; do
+ case $as_dir in #(
+ *\'*) as_qdir=`$as_echo "$as_dir" | sed "s/'/'\\\\\\\\''/g"`;; #'(
+ *) as_qdir=$as_dir;;
+ esac
+ as_dirs="'$as_qdir' $as_dirs"
+ as_dir=`$as_dirname -- "$as_dir" ||
+$as_expr X"$as_dir" : 'X\(.*[^/]\)//*[^/][^/]*/*$' \| \
+ X"$as_dir" : 'X\(//\)[^/]' \| \
+ X"$as_dir" : 'X\(//\)$' \| \
+ X"$as_dir" : 'X\(/\)' \| . 2>/dev/null ||
+$as_echo X"$as_dir" |
+ sed '/^X\(.*[^/]\)\/\/*[^/][^/]*\/*$/{
+ s//\1/
+ q
+ }
+ /^X\(\/\/\)[^/].*/{
+ s//\1/
+ q
+ }
+ /^X\(\/\/\)$/{
+ s//\1/
+ q
+ }
+ /^X\(\/\).*/{
+ s//\1/
+ q
+ }
+ s/.*/./; q'`
+ test -d "$as_dir" && break
+ done
+ test -z "$as_dirs" || eval "mkdir $as_dirs"
+ } || test -d "$as_dir" || as_fn_error $? "cannot create directory $as_dir"
+
+
+} # as_fn_mkdir_p
+
+# as_fn_executable_p FILE
+# -----------------------
+# Test if FILE is an executable regular file.
+as_fn_executable_p ()
+{
+ test -f "$1" && test -x "$1"
+} # as_fn_executable_p
+# as_fn_append VAR VALUE
+# ----------------------
+# Append the text in VALUE to the end of the definition contained in VAR. Take
+# advantage of any shell optimizations that allow amortized linear growth over
+# repeated appends, instead of the typical quadratic growth present in naive
+# implementations.
+if (eval "as_var=1; as_var+=2; test x\$as_var = x12") 2>/dev/null; then :
+ eval 'as_fn_append ()
+ {
+ eval $1+=\$2
+ }'
+else
+ as_fn_append ()
+ {
+ eval $1=\$$1\$2
+ }
+fi # as_fn_append
+
+# as_fn_arith ARG...
+# ------------------
+# Perform arithmetic evaluation on the ARGs, and store the result in the
+# global $as_val. Take advantage of shells that can avoid forks. The arguments
+# must be portable across $(()) and expr.
+if (eval "test \$(( 1 + 1 )) = 2") 2>/dev/null; then :
+ eval 'as_fn_arith ()
+ {
+ as_val=$(( $* ))
+ }'
+else
+ as_fn_arith ()
+ {
+ as_val=`expr "$@" || test $? -eq 1`
+ }
+fi # as_fn_arith
+
+
+# as_fn_error STATUS ERROR [LINENO LOG_FD]
+# ----------------------------------------
+# Output "`basename $0`: error: ERROR" to stderr. If LINENO and LOG_FD are
+# provided, also output the error to LOG_FD, referencing LINENO. Then exit the
+# script with STATUS, using 1 if that was 0.
+as_fn_error ()
+{
+ as_status=$1; test $as_status -eq 0 && as_status=1
+ if test "$4"; then
+ as_lineno=${as_lineno-"$3"} as_lineno_stack=as_lineno_stack=$as_lineno_stack
+ $as_echo "$as_me:${as_lineno-$LINENO}: error: $2" >&$4
+ fi
+ $as_echo "$as_me: error: $2" >&2
+ as_fn_exit $as_status
+} # as_fn_error
+
+if expr a : '\(a\)' >/dev/null 2>&1 &&
+ test "X`expr 00001 : '.*\(...\)'`" = X001; then
+ as_expr=expr
+else
+ as_expr=false
+fi
+
+if (basename -- /) >/dev/null 2>&1 && test "X`basename -- / 2>&1`" = "X/"; then
+ as_basename=basename
+else
+ as_basename=false
+fi
+
+if (as_dir=`dirname -- /` && test "X$as_dir" = X/) >/dev/null 2>&1; then
+ as_dirname=dirname
+else
+ as_dirname=false
+fi
+
+as_me=`$as_basename -- "$0" ||
+$as_expr X/"$0" : '.*/\([^/][^/]*\)/*$' \| \
+ X"$0" : 'X\(//\)$' \| \
+ X"$0" : 'X\(/\)' \| . 2>/dev/null ||
+$as_echo X/"$0" |
+ sed '/^.*\/\([^/][^/]*\)\/*$/{
+ s//\1/
+ q
+ }
+ /^X\/\(\/\/\)$/{
+ s//\1/
+ q
+ }
+ /^X\/\(\/\).*/{
+ s//\1/
+ q
+ }
+ s/.*/./; q'`
+
+# Avoid depending upon Character Ranges.
+as_cr_letters='abcdefghijklmnopqrstuvwxyz'
+as_cr_LETTERS='ABCDEFGHIJKLMNOPQRSTUVWXYZ'
+as_cr_Letters=$as_cr_letters$as_cr_LETTERS
+as_cr_digits='0123456789'
+as_cr_alnum=$as_cr_Letters$as_cr_digits
+
+
+ as_lineno_1=$LINENO as_lineno_1a=$LINENO
+ as_lineno_2=$LINENO as_lineno_2a=$LINENO
+ eval 'test "x$as_lineno_1'$as_run'" != "x$as_lineno_2'$as_run'" &&
+ test "x`expr $as_lineno_1'$as_run' + 1`" = "x$as_lineno_2'$as_run'"' || {
+ # Blame Lee E. McMahon (1931-1989) for sed's syntax. :-)
+ sed -n '
+ p
+ /[$]LINENO/=
+ ' <$as_myself |
+ sed '
+ s/[$]LINENO.*/&-/
+ t lineno
+ b
+ :lineno
+ N
+ :loop
+ s/[$]LINENO\([^'$as_cr_alnum'_].*\n\)\(.*\)/\2\1\2/
+ t loop
+ s/-\n.*//
+ ' >$as_me.lineno &&
+ chmod +x "$as_me.lineno" ||
+ { $as_echo "$as_me: error: cannot create $as_me.lineno; rerun with a POSIX shell" >&2; as_fn_exit 1; }
+
+ # If we had to re-execute with $CONFIG_SHELL, we're ensured to have
+ # already done that, so ensure we don't try to do so again and fall
+ # in an infinite loop. This has already happened in practice.
+ _as_can_reexec=no; export _as_can_reexec
+ # Don't try to exec as it changes $[0], causing all sort of problems
+ # (the dirname of $[0] is not the place where we might find the
+ # original and so on. Autoconf is especially sensitive to this).
+ . "./$as_me.lineno"
+ # Exit status is that of the last command.
+ exit
+}
+
+ECHO_C= ECHO_N= ECHO_T=
+case `echo -n x` in #(((((
+-n*)
+ case `echo 'xy\c'` in
+ *c*) ECHO_T=' ';; # ECHO_T is single tab character.
+ xy) ECHO_C='\c';;
+ *) echo `echo ksh88 bug on AIX 6.1` > /dev/null
+ ECHO_T=' ';;
+ esac;;
+*)
+ ECHO_N='-n';;
+esac
+
+rm -f conf$$ conf$$.exe conf$$.file
+if test -d conf$$.dir; then
+ rm -f conf$$.dir/conf$$.file
+else
+ rm -f conf$$.dir
+ mkdir conf$$.dir 2>/dev/null
+fi
+if (echo >conf$$.file) 2>/dev/null; then
+ if ln -s conf$$.file conf$$ 2>/dev/null; then
+ as_ln_s='ln -s'
+ # ... but there are two gotchas:
+ # 1) On MSYS, both `ln -s file dir' and `ln file dir' fail.
+ # 2) DJGPP < 2.04 has no symlinks; `ln -s' creates a wrapper executable.
+ # In both cases, we have to default to `cp -pR'.
+ ln -s conf$$.file conf$$.dir 2>/dev/null && test ! -f conf$$.exe ||
+ as_ln_s='cp -pR'
+ elif ln conf$$.file conf$$ 2>/dev/null; then
+ as_ln_s=ln
+ else
+ as_ln_s='cp -pR'
+ fi
+else
+ as_ln_s='cp -pR'
+fi
+rm -f conf$$ conf$$.exe conf$$.dir/conf$$.file conf$$.file
+rmdir conf$$.dir 2>/dev/null
+
+if mkdir -p . 2>/dev/null; then
+ as_mkdir_p='mkdir -p "$as_dir"'
+else
+ test -d ./-p && rmdir ./-p
+ as_mkdir_p=false
+fi
+
+as_test_x='test -x'
+as_executable_p=as_fn_executable_p
+
+# Sed expression to map a string onto a valid CPP name.
+as_tr_cpp="eval sed 'y%*$as_cr_letters%P$as_cr_LETTERS%;s%[^_$as_cr_alnum]%_%g'"
+
+# Sed expression to map a string onto a valid variable name.
+as_tr_sh="eval sed 'y%*+%pp%;s%[^_$as_cr_alnum]%_%g'"
+
+
+test -n "$DJDIR" || exec 7<&0 </dev/null
+exec 6>&1
+
+# Name of the host.
+# hostname on some systems (SVR3.2, old GNU/Linux) returns a bogus exit status,
+# so uname gets run too.
+ac_hostname=`(hostname || uname -n) 2>/dev/null | sed 1q`
+
+#
+# Initializations.
+#
+ac_default_prefix=/usr/local
+ac_clean_files=
+ac_config_libobj_dir=.
+LIBOBJS=
+cross_compiling=no
+subdirs=
+MFLAGS=
+MAKEFLAGS=
+
+# Identity of this package.
+PACKAGE_NAME='clpAPI'
+PACKAGE_TARNAME='clpapi'
+PACKAGE_VERSION='1.2.6'
+PACKAGE_STRING='clpAPI 1.2.6'
+PACKAGE_BUGREPORT='geliudie@uni-duesseldorf.de'
+PACKAGE_URL=''
+
+# Factoring default headers for most tests.
+ac_includes_default="\
+#include <stdio.h>
+#ifdef HAVE_SYS_TYPES_H
+# include <sys/types.h>
+#endif
+#ifdef HAVE_SYS_STAT_H
+# include <sys/stat.h>
+#endif
+#ifdef STDC_HEADERS
+# include <stdlib.h>
+# include <stddef.h>
+#else
+# ifdef HAVE_STDLIB_H
+# include <stdlib.h>
+# endif
+#endif
+#ifdef HAVE_STRING_H
+# if !defined STDC_HEADERS && defined HAVE_MEMORY_H
+# include <memory.h>
+# endif
+# include <string.h>
+#endif
+#ifdef HAVE_STRINGS_H
+# include <strings.h>
+#endif
+#ifdef HAVE_INTTYPES_H
+# include <inttypes.h>
+#endif
+#ifdef HAVE_STDINT_H
+# include <stdint.h>
+#endif
+#ifdef HAVE_UNISTD_H
+# include <unistd.h>
+#endif"
+
+ac_subst_vars='LTLIBOBJS
+LIBOBJS
+PKG_CPPFLAGS
+PKG_LIBS
+PKG_CFLAGS
+EGREP
+GREP
+ac_prefix_program
+PKG_CONFIG
+CPP
+OBJEXT
+EXEEXT
+ac_ct_CC
+CPPFLAGS
+LDFLAGS
+CFLAGS
+CC
+target_alias
+host_alias
+build_alias
+LIBS
+ECHO_T
+ECHO_N
+ECHO_C
+DEFS
+mandir
+localedir
+libdir
+psdir
+pdfdir
+dvidir
+htmldir
+infodir
+docdir
+oldincludedir
+includedir
+localstatedir
+sharedstatedir
+sysconfdir
+datadir
+datarootdir
+libexecdir
+sbindir
+bindir
+program_transform_name
+prefix
+exec_prefix
+PACKAGE_URL
+PACKAGE_BUGREPORT
+PACKAGE_STRING
+PACKAGE_VERSION
+PACKAGE_TARNAME
+PACKAGE_NAME
+PATH_SEPARATOR
+SHELL'
+ac_subst_files=''
+ac_user_opts='
+enable_option_checking
+with_clp_include
+with_clp_lib
+'
+ ac_precious_vars='build_alias
+host_alias
+target_alias
+CC
+CFLAGS
+LDFLAGS
+LIBS
+CPPFLAGS
+CPP'
+
+
+# Initialize some variables set by options.
+ac_init_help=
+ac_init_version=false
+ac_unrecognized_opts=
+ac_unrecognized_sep=
+# The variables have the same names as the options, with
+# dashes changed to underlines.
+cache_file=/dev/null
+exec_prefix=NONE
+no_create=
+no_recursion=
+prefix=NONE
+program_prefix=NONE
+program_suffix=NONE
+program_transform_name=s,x,x,
+silent=
+site=
+srcdir=
+verbose=
+x_includes=NONE
+x_libraries=NONE
+
+# Installation directory options.
+# These are left unexpanded so users can "make install exec_prefix=/foo"
+# and all the variables that are supposed to be based on exec_prefix
+# by default will actually change.
+# Use braces instead of parens because sh, perl, etc. also accept them.
+# (The list follows the same order as the GNU Coding Standards.)
+bindir='${exec_prefix}/bin'
+sbindir='${exec_prefix}/sbin'
+libexecdir='${exec_prefix}/libexec'
+datarootdir='${prefix}/share'
+datadir='${datarootdir}'
+sysconfdir='${prefix}/etc'
+sharedstatedir='${prefix}/com'
+localstatedir='${prefix}/var'
+includedir='${prefix}/include'
+oldincludedir='/usr/include'
+docdir='${datarootdir}/doc/${PACKAGE_TARNAME}'
+infodir='${datarootdir}/info'
+htmldir='${docdir}'
+dvidir='${docdir}'
+pdfdir='${docdir}'
+psdir='${docdir}'
+libdir='${exec_prefix}/lib'
+localedir='${datarootdir}/locale'
+mandir='${datarootdir}/man'
+
+ac_prev=
+ac_dashdash=
+for ac_option
+do
+ # If the previous option needs an argument, assign it.
+ if test -n "$ac_prev"; then
+ eval $ac_prev=\$ac_option
+ ac_prev=
+ continue
+ fi
+
+ case $ac_option in
+ *=?*) ac_optarg=`expr "X$ac_option" : '[^=]*=\(.*\)'` ;;
+ *=) ac_optarg= ;;
+ *) ac_optarg=yes ;;
+ esac
+
+ # Accept the important Cygnus configure options, so we can diagnose typos.
+
+ case $ac_dashdash$ac_option in
+ --)
+ ac_dashdash=yes ;;
+
+ -bindir | --bindir | --bindi | --bind | --bin | --bi)
+ ac_prev=bindir ;;
+ -bindir=* | --bindir=* | --bindi=* | --bind=* | --bin=* | --bi=*)
+ bindir=$ac_optarg ;;
+
+ -build | --build | --buil | --bui | --bu)
+ ac_prev=build_alias ;;
+ -build=* | --build=* | --buil=* | --bui=* | --bu=*)
+ build_alias=$ac_optarg ;;
+
+ -cache-file | --cache-file | --cache-fil | --cache-fi \
+ | --cache-f | --cache- | --cache | --cach | --cac | --ca | --c)
+ ac_prev=cache_file ;;
+ -cache-file=* | --cache-file=* | --cache-fil=* | --cache-fi=* \
+ | --cache-f=* | --cache-=* | --cache=* | --cach=* | --cac=* | --ca=* | --c=*)
+ cache_file=$ac_optarg ;;
+
+ --config-cache | -C)
+ cache_file=config.cache ;;
+
+ -datadir | --datadir | --datadi | --datad)
+ ac_prev=datadir ;;
+ -datadir=* | --datadir=* | --datadi=* | --datad=*)
+ datadir=$ac_optarg ;;
+
+ -datarootdir | --datarootdir | --datarootdi | --datarootd | --dataroot \
+ | --dataroo | --dataro | --datar)
+ ac_prev=datarootdir ;;
+ -datarootdir=* | --datarootdir=* | --datarootdi=* | --datarootd=* \
+ | --dataroot=* | --dataroo=* | --dataro=* | --datar=*)
+ datarootdir=$ac_optarg ;;
+
+ -disable-* | --disable-*)
+ ac_useropt=`expr "x$ac_option" : 'x-*disable-\(.*\)'`
+ # Reject names that are not valid shell variable names.
+ expr "x$ac_useropt" : ".*[^-+._$as_cr_alnum]" >/dev/null &&
+ as_fn_error $? "invalid feature name: $ac_useropt"
+ ac_useropt_orig=$ac_useropt
+ ac_useropt=`$as_echo "$ac_useropt" | sed 's/[-+.]/_/g'`
+ case $ac_user_opts in
+ *"
+"enable_$ac_useropt"
+"*) ;;
+ *) ac_unrecognized_opts="$ac_unrecognized_opts$ac_unrecognized_sep--disable-$ac_useropt_orig"
+ ac_unrecognized_sep=', ';;
+ esac
+ eval enable_$ac_useropt=no ;;
+
+ -docdir | --docdir | --docdi | --doc | --do)
+ ac_prev=docdir ;;
+ -docdir=* | --docdir=* | --docdi=* | --doc=* | --do=*)
+ docdir=$ac_optarg ;;
+
+ -dvidir | --dvidir | --dvidi | --dvid | --dvi | --dv)
+ ac_prev=dvidir ;;
+ -dvidir=* | --dvidir=* | --dvidi=* | --dvid=* | --dvi=* | --dv=*)
+ dvidir=$ac_optarg ;;
+
+ -enable-* | --enable-*)
+ ac_useropt=`expr "x$ac_option" : 'x-*enable-\([^=]*\)'`
+ # Reject names that are not valid shell variable names.
+ expr "x$ac_useropt" : ".*[^-+._$as_cr_alnum]" >/dev/null &&
+ as_fn_error $? "invalid feature name: $ac_useropt"
+ ac_useropt_orig=$ac_useropt
+ ac_useropt=`$as_echo "$ac_useropt" | sed 's/[-+.]/_/g'`
+ case $ac_user_opts in
+ *"
+"enable_$ac_useropt"
+"*) ;;
+ *) ac_unrecognized_opts="$ac_unrecognized_opts$ac_unrecognized_sep--enable-$ac_useropt_orig"
+ ac_unrecognized_sep=', ';;
+ esac
+ eval enable_$ac_useropt=\$ac_optarg ;;
+
+ -exec-prefix | --exec_prefix | --exec-prefix | --exec-prefi \
+ | --exec-pref | --exec-pre | --exec-pr | --exec-p | --exec- \
+ | --exec | --exe | --ex)
+ ac_prev=exec_prefix ;;
+ -exec-prefix=* | --exec_prefix=* | --exec-prefix=* | --exec-prefi=* \
+ | --exec-pref=* | --exec-pre=* | --exec-pr=* | --exec-p=* | --exec-=* \
+ | --exec=* | --exe=* | --ex=*)
+ exec_prefix=$ac_optarg ;;
+
+ -gas | --gas | --ga | --g)
+ # Obsolete; use --with-gas.
+ with_gas=yes ;;
+
+ -help | --help | --hel | --he | -h)
+ ac_init_help=long ;;
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+
+Usage: $0 [OPTION]... [VAR=VALUE]...
+
+To assign environment variables (e.g., CC, CFLAGS...), specify them as
+VAR=VALUE. See below for descriptions of some of the useful variables.
+
+Defaults for the options are specified in brackets.
+
+Configuration:
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+ --help=short display options specific to this package
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+For better control, use the options below.
+
+Fine tuning of the installation directories:
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+ --sbindir=DIR system admin executables [EPREFIX/sbin]
+ --libexecdir=DIR program executables [EPREFIX/libexec]
+ --sysconfdir=DIR read-only single-machine data [PREFIX/etc]
+ --sharedstatedir=DIR modifiable architecture-independent data [PREFIX/com]
+ --localstatedir=DIR modifiable single-machine data [PREFIX/var]
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+ --infodir=DIR info documentation [DATAROOTDIR/info]
+ --localedir=DIR locale-dependent data [DATAROOTDIR/locale]
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+ --htmldir=DIR html documentation [DOCDIR]
+ --dvidir=DIR dvi documentation [DOCDIR]
+ --pdfdir=DIR pdf documentation [DOCDIR]
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+_ACEOF
+
+ cat <<\_ACEOF
+_ACEOF
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+if test -n "$ac_init_help"; then
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+ cat <<\_ACEOF
+
+Optional Packages:
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+ --without-PACKAGE do not use PACKAGE (same as --with-PACKAGE=no)
+ --with-clp-include=PATH location of COIN-OR Clp include directory
+ [[/usr/local/include]]
+ --with-clp-lib=PATH location of COIN-OR Clp callable library
+ [[usr/local/lib]]
+
+Some influential environment variables:
+ CC C compiler command
+ CFLAGS C compiler flags
+ LDFLAGS linker flags, e.g. -L<lib dir> if you have libraries in a
+ nonstandard directory <lib dir>
+ LIBS libraries to pass to the linker, e.g. -l<library>
+ CPPFLAGS (Objective) C/C++ preprocessor flags, e.g. -I<include dir> if
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+ CPP C preprocessor
+
+Use these variables to override the choices made by `configure' or to help
+it to find libraries and programs with nonstandard names/locations.
+
+Report bugs to <geliudie@uni-duesseldorf.de>.
+_ACEOF
+ac_status=$?
+fi
+
+if test "$ac_init_help" = "recursive"; then
+ # If there are subdirs, report their specific --help.
+ for ac_dir in : $ac_subdirs_all; do test "x$ac_dir" = x: && continue
+ test -d "$ac_dir" ||
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+ ac_builddir=.
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+case "$ac_dir" in
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+ ac_abs_top_srcdir=$srcdir ;;
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+ac_abs_srcdir=$ac_abs_top_srcdir$ac_dir_suffix
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+ cd "$ac_dir" || { ac_status=$?; continue; }
+ # Check for guested configure.
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+test -n "$ac_init_help" && exit $ac_status
+if $ac_init_version; then
+ cat <<\_ACEOF
+clpAPI configure 1.2.6
+generated by GNU Autoconf 2.69
+
+Copyright (C) 2012 Free Software Foundation, Inc.
+This configure script is free software; the Free Software Foundation
+gives unlimited permission to copy, distribute and modify it.
+_ACEOF
+ exit
+fi
+
+## ------------------------ ##
+## Autoconf initialization. ##
+## ------------------------ ##
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+# ac_fn_c_try_compile LINENO
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+ac_fn_c_try_compile ()
+{
+ as_lineno=${as_lineno-"$1"} as_lineno_stack=as_lineno_stack=$as_lineno_stack
+ rm -f conftest.$ac_objext
+ if { { ac_try="$ac_compile"
+case "(($ac_try" in
+ *\"* | *\`* | *\\*) ac_try_echo=\$ac_try;;
+ *) ac_try_echo=$ac_try;;
+esac
+eval ac_try_echo="\"\$as_me:${as_lineno-$LINENO}: $ac_try_echo\""
+$as_echo "$ac_try_echo"; } >&5
+ (eval "$ac_compile") 2>conftest.err
+ ac_status=$?
+ if test -s conftest.err; then
+ grep -v '^ *+' conftest.err >conftest.er1
+ cat conftest.er1 >&5
+ mv -f conftest.er1 conftest.err
+ fi
+ $as_echo "$as_me:${as_lineno-$LINENO}: \$? = $ac_status" >&5
+ test $ac_status = 0; } && {
+ test -z "$ac_c_werror_flag" ||
+ test ! -s conftest.err
+ } && test -s conftest.$ac_objext; then :
+ ac_retval=0
+else
+ $as_echo "$as_me: failed program was:" >&5
+sed 's/^/| /' conftest.$ac_ext >&5
+
+ ac_retval=1
+fi
+ eval $as_lineno_stack; ${as_lineno_stack:+:} unset as_lineno
+ as_fn_set_status $ac_retval
+
+} # ac_fn_c_try_compile
+
+# ac_fn_c_try_cpp LINENO
+# ----------------------
+# Try to preprocess conftest.$ac_ext, and return whether this succeeded.
+ac_fn_c_try_cpp ()
+{
+ as_lineno=${as_lineno-"$1"} as_lineno_stack=as_lineno_stack=$as_lineno_stack
+ if { { ac_try="$ac_cpp conftest.$ac_ext"
+case "(($ac_try" in
+ *\"* | *\`* | *\\*) ac_try_echo=\$ac_try;;
+ *) ac_try_echo=$ac_try;;
+esac
+eval ac_try_echo="\"\$as_me:${as_lineno-$LINENO}: $ac_try_echo\""
+$as_echo "$ac_try_echo"; } >&5
+ (eval "$ac_cpp conftest.$ac_ext") 2>conftest.err
+ ac_status=$?
+ if test -s conftest.err; then
+ grep -v '^ *+' conftest.err >conftest.er1
+ cat conftest.er1 >&5
+ mv -f conftest.er1 conftest.err
+ fi
+ $as_echo "$as_me:${as_lineno-$LINENO}: \$? = $ac_status" >&5
+ test $ac_status = 0; } > conftest.i && {
+ test -z "$ac_c_preproc_warn_flag$ac_c_werror_flag" ||
+ test ! -s conftest.err
+ }; then :
+ ac_retval=0
+else
+ $as_echo "$as_me: failed program was:" >&5
+sed 's/^/| /' conftest.$ac_ext >&5
+
+ ac_retval=1
+fi
+ eval $as_lineno_stack; ${as_lineno_stack:+:} unset as_lineno
+ as_fn_set_status $ac_retval
+
+} # ac_fn_c_try_cpp
+
+# ac_fn_c_check_header_mongrel LINENO HEADER VAR INCLUDES
+# -------------------------------------------------------
+# Tests whether HEADER exists, giving a warning if it cannot be compiled using
+# the include files in INCLUDES and setting the cache variable VAR
+# accordingly.
+ac_fn_c_check_header_mongrel ()
+{
+ as_lineno=${as_lineno-"$1"} as_lineno_stack=as_lineno_stack=$as_lineno_stack
+ if eval \${$3+:} false; then :
+ { $as_echo "$as_me:${as_lineno-$LINENO}: checking for $2" >&5
+$as_echo_n "checking for $2... " >&6; }
+if eval \${$3+:} false; then :
+ $as_echo_n "(cached) " >&6
+fi
+eval ac_res=\$$3
+ { $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_res" >&5
+$as_echo "$ac_res" >&6; }
+else
+ # Is the header compilable?
+{ $as_echo "$as_me:${as_lineno-$LINENO}: checking $2 usability" >&5
+$as_echo_n "checking $2 usability... " >&6; }
+cat confdefs.h - <<_ACEOF >conftest.$ac_ext
+/* end confdefs.h. */
+$4
+#include <$2>
+_ACEOF
+if ac_fn_c_try_compile "$LINENO"; then :
+ ac_header_compiler=yes
+else
+ ac_header_compiler=no
+fi
+rm -f core conftest.err conftest.$ac_objext conftest.$ac_ext
+{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_header_compiler" >&5
+$as_echo "$ac_header_compiler" >&6; }
+
+# Is the header present?
+{ $as_echo "$as_me:${as_lineno-$LINENO}: checking $2 presence" >&5
+$as_echo_n "checking $2 presence... " >&6; }
+cat confdefs.h - <<_ACEOF >conftest.$ac_ext
+/* end confdefs.h. */
+#include <$2>
+_ACEOF
+if ac_fn_c_try_cpp "$LINENO"; then :
+ ac_header_preproc=yes
+else
+ ac_header_preproc=no
+fi
+rm -f conftest.err conftest.i conftest.$ac_ext
+{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_header_preproc" >&5
+$as_echo "$ac_header_preproc" >&6; }
+
+# So? What about this header?
+case $ac_header_compiler:$ac_header_preproc:$ac_c_preproc_warn_flag in #((
+ yes:no: )
+ { $as_echo "$as_me:${as_lineno-$LINENO}: WARNING: $2: accepted by the compiler, rejected by the preprocessor!" >&5
+$as_echo "$as_me: WARNING: $2: accepted by the compiler, rejected by the preprocessor!" >&2;}
+ { $as_echo "$as_me:${as_lineno-$LINENO}: WARNING: $2: proceeding with the compiler's result" >&5
+$as_echo "$as_me: WARNING: $2: proceeding with the compiler's result" >&2;}
+ ;;
+ no:yes:* )
+ { $as_echo "$as_me:${as_lineno-$LINENO}: WARNING: $2: present but cannot be compiled" >&5
+$as_echo "$as_me: WARNING: $2: present but cannot be compiled" >&2;}
+ { $as_echo "$as_me:${as_lineno-$LINENO}: WARNING: $2: check for missing prerequisite headers?" >&5
+$as_echo "$as_me: WARNING: $2: check for missing prerequisite headers?" >&2;}
+ { $as_echo "$as_me:${as_lineno-$LINENO}: WARNING: $2: see the Autoconf documentation" >&5
+$as_echo "$as_me: WARNING: $2: see the Autoconf documentation" >&2;}
+ { $as_echo "$as_me:${as_lineno-$LINENO}: WARNING: $2: section \"Present But Cannot Be Compiled\"" >&5
+$as_echo "$as_me: WARNING: $2: section \"Present But Cannot Be Compiled\"" >&2;}
+ { $as_echo "$as_me:${as_lineno-$LINENO}: WARNING: $2: proceeding with the compiler's result" >&5
+$as_echo "$as_me: WARNING: $2: proceeding with the compiler's result" >&2;}
+( $as_echo "## ------------------------------------------ ##
+## Report this to geliudie@uni-duesseldorf.de ##
+## ------------------------------------------ ##"
+ ) | sed "s/^/$as_me: WARNING: /" >&2
+ ;;
+esac
+ { $as_echo "$as_me:${as_lineno-$LINENO}: checking for $2" >&5
+$as_echo_n "checking for $2... " >&6; }
+if eval \${$3+:} false; then :
+ $as_echo_n "(cached) " >&6
+else
+ eval "$3=\$ac_header_compiler"
+fi
+eval ac_res=\$$3
+ { $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_res" >&5
+$as_echo "$ac_res" >&6; }
+fi
+ eval $as_lineno_stack; ${as_lineno_stack:+:} unset as_lineno
+
+} # ac_fn_c_check_header_mongrel
+
+# ac_fn_c_try_run LINENO
+# ----------------------
+# Try to link conftest.$ac_ext, and return whether this succeeded. Assumes
+# that executables *can* be run.
+ac_fn_c_try_run ()
+{
+ as_lineno=${as_lineno-"$1"} as_lineno_stack=as_lineno_stack=$as_lineno_stack
+ if { { ac_try="$ac_link"
+case "(($ac_try" in
+ *\"* | *\`* | *\\*) ac_try_echo=\$ac_try;;
+ *) ac_try_echo=$ac_try;;
+esac
+eval ac_try_echo="\"\$as_me:${as_lineno-$LINENO}: $ac_try_echo\""
+$as_echo "$ac_try_echo"; } >&5
+ (eval "$ac_link") 2>&5
+ ac_status=$?
+ $as_echo "$as_me:${as_lineno-$LINENO}: \$? = $ac_status" >&5
+ test $ac_status = 0; } && { ac_try='./conftest$ac_exeext'
+ { { case "(($ac_try" in
+ *\"* | *\`* | *\\*) ac_try_echo=\$ac_try;;
+ *) ac_try_echo=$ac_try;;
+esac
+eval ac_try_echo="\"\$as_me:${as_lineno-$LINENO}: $ac_try_echo\""
+$as_echo "$ac_try_echo"; } >&5
+ (eval "$ac_try") 2>&5
+ ac_status=$?
+ $as_echo "$as_me:${as_lineno-$LINENO}: \$? = $ac_status" >&5
+ test $ac_status = 0; }; }; then :
+ ac_retval=0
+else
+ $as_echo "$as_me: program exited with status $ac_status" >&5
+ $as_echo "$as_me: failed program was:" >&5
+sed 's/^/| /' conftest.$ac_ext >&5
+
+ ac_retval=$ac_status
+fi
+ rm -rf conftest.dSYM conftest_ipa8_conftest.oo
+ eval $as_lineno_stack; ${as_lineno_stack:+:} unset as_lineno
+ as_fn_set_status $ac_retval
+
+} # ac_fn_c_try_run
+
+# ac_fn_c_check_header_compile LINENO HEADER VAR INCLUDES
+# -------------------------------------------------------
+# Tests whether HEADER exists and can be compiled using the include files in
+# INCLUDES, setting the cache variable VAR accordingly.
+ac_fn_c_check_header_compile ()
+{
+ as_lineno=${as_lineno-"$1"} as_lineno_stack=as_lineno_stack=$as_lineno_stack
+ { $as_echo "$as_me:${as_lineno-$LINENO}: checking for $2" >&5
+$as_echo_n "checking for $2... " >&6; }
+if eval \${$3+:} false; then :
+ $as_echo_n "(cached) " >&6
+else
+ cat confdefs.h - <<_ACEOF >conftest.$ac_ext
+/* end confdefs.h. */
+$4
+#include <$2>
+_ACEOF
+if ac_fn_c_try_compile "$LINENO"; then :
+ eval "$3=yes"
+else
+ eval "$3=no"
+fi
+rm -f core conftest.err conftest.$ac_objext conftest.$ac_ext
+fi
+eval ac_res=\$$3
+ { $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_res" >&5
+$as_echo "$ac_res" >&6; }
+ eval $as_lineno_stack; ${as_lineno_stack:+:} unset as_lineno
+
+} # ac_fn_c_check_header_compile
+
+# ac_fn_c_try_link LINENO
+# -----------------------
+# Try to link conftest.$ac_ext, and return whether this succeeded.
+ac_fn_c_try_link ()
+{
+ as_lineno=${as_lineno-"$1"} as_lineno_stack=as_lineno_stack=$as_lineno_stack
+ rm -f conftest.$ac_objext conftest$ac_exeext
+ if { { ac_try="$ac_link"
+case "(($ac_try" in
+ *\"* | *\`* | *\\*) ac_try_echo=\$ac_try;;
+ *) ac_try_echo=$ac_try;;
+esac
+eval ac_try_echo="\"\$as_me:${as_lineno-$LINENO}: $ac_try_echo\""
+$as_echo "$ac_try_echo"; } >&5
+ (eval "$ac_link") 2>conftest.err
+ ac_status=$?
+ if test -s conftest.err; then
+ grep -v '^ *+' conftest.err >conftest.er1
+ cat conftest.er1 >&5
+ mv -f conftest.er1 conftest.err
+ fi
+ $as_echo "$as_me:${as_lineno-$LINENO}: \$? = $ac_status" >&5
+ test $ac_status = 0; } && {
+ test -z "$ac_c_werror_flag" ||
+ test ! -s conftest.err
+ } && test -s conftest$ac_exeext && {
+ test "$cross_compiling" = yes ||
+ test -x conftest$ac_exeext
+ }; then :
+ ac_retval=0
+else
+ $as_echo "$as_me: failed program was:" >&5
+sed 's/^/| /' conftest.$ac_ext >&5
+
+ ac_retval=1
+fi
+ # Delete the IPA/IPO (Inter Procedural Analysis/Optimization) information
+ # created by the PGI compiler (conftest_ipa8_conftest.oo), as it would
+ # interfere with the next link command; also delete a directory that is
+ # left behind by Apple's compiler. We do this before executing the actions.
+ rm -rf conftest.dSYM conftest_ipa8_conftest.oo
+ eval $as_lineno_stack; ${as_lineno_stack:+:} unset as_lineno
+ as_fn_set_status $ac_retval
+
+} # ac_fn_c_try_link
+cat >config.log <<_ACEOF
+This file contains any messages produced by compilers while
+running configure, to aid debugging if configure makes a mistake.
+
+It was created by clpAPI $as_me 1.2.6, which was
+generated by GNU Autoconf 2.69. Invocation command line was
+
+ $ $0 $@
+
+_ACEOF
+exec 5>>config.log
+{
+cat <<_ASUNAME
+## --------- ##
+## Platform. ##
+## --------- ##
+
+hostname = `(hostname || uname -n) 2>/dev/null | sed 1q`
+uname -m = `(uname -m) 2>/dev/null || echo unknown`
+uname -r = `(uname -r) 2>/dev/null || echo unknown`
+uname -s = `(uname -s) 2>/dev/null || echo unknown`
+uname -v = `(uname -v) 2>/dev/null || echo unknown`
+
+/usr/bin/uname -p = `(/usr/bin/uname -p) 2>/dev/null || echo unknown`
+/bin/uname -X = `(/bin/uname -X) 2>/dev/null || echo unknown`
+
+/bin/arch = `(/bin/arch) 2>/dev/null || echo unknown`
+/usr/bin/arch -k = `(/usr/bin/arch -k) 2>/dev/null || echo unknown`
+/usr/convex/getsysinfo = `(/usr/convex/getsysinfo) 2>/dev/null || echo unknown`
+/usr/bin/hostinfo = `(/usr/bin/hostinfo) 2>/dev/null || echo unknown`
+/bin/machine = `(/bin/machine) 2>/dev/null || echo unknown`
+/usr/bin/oslevel = `(/usr/bin/oslevel) 2>/dev/null || echo unknown`
+/bin/universe = `(/bin/universe) 2>/dev/null || echo unknown`
+
+_ASUNAME
+
+as_save_IFS=$IFS; IFS=$PATH_SEPARATOR
+for as_dir in $PATH
+do
+ IFS=$as_save_IFS
+ test -z "$as_dir" && as_dir=.
+ $as_echo "PATH: $as_dir"
+ done
+IFS=$as_save_IFS
+
+} >&5
+
+cat >&5 <<_ACEOF
+
+
+## ----------- ##
+## Core tests. ##
+## ----------- ##
+
+_ACEOF
+
+
+# Keep a trace of the command line.
+# Strip out --no-create and --no-recursion so they do not pile up.
+# Strip out --silent because we don't want to record it for future runs.
+# Also quote any args containing shell meta-characters.
+# Make two passes to allow for proper duplicate-argument suppression.
+ac_configure_args=
+ac_configure_args0=
+ac_configure_args1=
+ac_must_keep_next=false
+for ac_pass in 1 2
+do
+ for ac_arg
+ do
+ case $ac_arg in
+ -no-create | --no-c* | -n | -no-recursion | --no-r*) continue ;;
+ -q | -quiet | --quiet | --quie | --qui | --qu | --q \
+ | -silent | --silent | --silen | --sile | --sil)
+ continue ;;
+ *\'*)
+ ac_arg=`$as_echo "$ac_arg" | sed "s/'/'\\\\\\\\''/g"` ;;
+ esac
+ case $ac_pass in
+ 1) as_fn_append ac_configure_args0 " '$ac_arg'" ;;
+ 2)
+ as_fn_append ac_configure_args1 " '$ac_arg'"
+ if test $ac_must_keep_next = true; then
+ ac_must_keep_next=false # Got value, back to normal.
+ else
+ case $ac_arg in
+ *=* | --config-cache | -C | -disable-* | --disable-* \
+ | -enable-* | --enable-* | -gas | --g* | -nfp | --nf* \
+ | -q | -quiet | --q* | -silent | --sil* | -v | -verb* \
+ | -with-* | --with-* | -without-* | --without-* | --x)
+ case "$ac_configure_args0 " in
+ "$ac_configure_args1"*" '$ac_arg' "* ) continue ;;
+ esac
+ ;;
+ -* ) ac_must_keep_next=true ;;
+ esac
+ fi
+ as_fn_append ac_configure_args " '$ac_arg'"
+ ;;
+ esac
+ done
+done
+{ ac_configure_args0=; unset ac_configure_args0;}
+{ ac_configure_args1=; unset ac_configure_args1;}
+
+# When interrupted or exit'd, cleanup temporary files, and complete
+# config.log. We remove comments because anyway the quotes in there
+# would cause problems or look ugly.
+# WARNING: Use '\'' to represent an apostrophe within the trap.
+# WARNING: Do not start the trap code with a newline, due to a FreeBSD 4.0 bug.
+trap 'exit_status=$?
+ # Save into config.log some information that might help in debugging.
+ {
+ echo
+
+ $as_echo "## ---------------- ##
+## Cache variables. ##
+## ---------------- ##"
+ echo
+ # The following way of writing the cache mishandles newlines in values,
+(
+ for ac_var in `(set) 2>&1 | sed -n '\''s/^\([a-zA-Z_][a-zA-Z0-9_]*\)=.*/\1/p'\''`; do
+ eval ac_val=\$$ac_var
+ case $ac_val in #(
+ *${as_nl}*)
+ case $ac_var in #(
+ *_cv_*) { $as_echo "$as_me:${as_lineno-$LINENO}: WARNING: cache variable $ac_var contains a newline" >&5
+$as_echo "$as_me: WARNING: cache variable $ac_var contains a newline" >&2;} ;;
+ esac
+ case $ac_var in #(
+ _ | IFS | as_nl) ;; #(
+ BASH_ARGV | BASH_SOURCE) eval $ac_var= ;; #(
+ *) { eval $ac_var=; unset $ac_var;} ;;
+ esac ;;
+ esac
+ done
+ (set) 2>&1 |
+ case $as_nl`(ac_space='\'' '\''; set) 2>&1` in #(
+ *${as_nl}ac_space=\ *)
+ sed -n \
+ "s/'\''/'\''\\\\'\'''\''/g;
+ s/^\\([_$as_cr_alnum]*_cv_[_$as_cr_alnum]*\\)=\\(.*\\)/\\1='\''\\2'\''/p"
+ ;; #(
+ *)
+ sed -n "/^[_$as_cr_alnum]*_cv_[_$as_cr_alnum]*=/p"
+ ;;
+ esac |
+ sort
+)
+ echo
+
+ $as_echo "## ----------------- ##
+## Output variables. ##
+## ----------------- ##"
+ echo
+ for ac_var in $ac_subst_vars
+ do
+ eval ac_val=\$$ac_var
+ case $ac_val in
+ *\'\''*) ac_val=`$as_echo "$ac_val" | sed "s/'\''/'\''\\\\\\\\'\'''\''/g"`;;
+ esac
+ $as_echo "$ac_var='\''$ac_val'\''"
+ done | sort
+ echo
+
+ if test -n "$ac_subst_files"; then
+ $as_echo "## ------------------- ##
+## File substitutions. ##
+## ------------------- ##"
+ echo
+ for ac_var in $ac_subst_files
+ do
+ eval ac_val=\$$ac_var
+ case $ac_val in
+ *\'\''*) ac_val=`$as_echo "$ac_val" | sed "s/'\''/'\''\\\\\\\\'\'''\''/g"`;;
+ esac
+ $as_echo "$ac_var='\''$ac_val'\''"
+ done | sort
+ echo
+ fi
+
+ if test -s confdefs.h; then
+ $as_echo "## ----------- ##
+## confdefs.h. ##
+## ----------- ##"
+ echo
+ cat confdefs.h
+ echo
+ fi
+ test "$ac_signal" != 0 &&
+ $as_echo "$as_me: caught signal $ac_signal"
+ $as_echo "$as_me: exit $exit_status"
+ } >&5
+ rm -f core *.core core.conftest.* &&
+ rm -f -r conftest* confdefs* conf$$* $ac_clean_files &&
+ exit $exit_status
+' 0
+for ac_signal in 1 2 13 15; do
+ trap 'ac_signal='$ac_signal'; as_fn_exit 1' $ac_signal
+done
+ac_signal=0
+
+# confdefs.h avoids OS command line length limits that DEFS can exceed.
+rm -f -r conftest* confdefs.h
+
+$as_echo "/* confdefs.h */" > confdefs.h
+
+# Predefined preprocessor variables.
+
+cat >>confdefs.h <<_ACEOF
+#define PACKAGE_NAME "$PACKAGE_NAME"
+_ACEOF
+
+cat >>confdefs.h <<_ACEOF
+#define PACKAGE_TARNAME "$PACKAGE_TARNAME"
+_ACEOF
+
+cat >>confdefs.h <<_ACEOF
+#define PACKAGE_VERSION "$PACKAGE_VERSION"
+_ACEOF
+
+cat >>confdefs.h <<_ACEOF
+#define PACKAGE_STRING "$PACKAGE_STRING"
+_ACEOF
+
+cat >>confdefs.h <<_ACEOF
+#define PACKAGE_BUGREPORT "$PACKAGE_BUGREPORT"
+_ACEOF
+
+cat >>confdefs.h <<_ACEOF
+#define PACKAGE_URL "$PACKAGE_URL"
+_ACEOF
+
+
+# Let the site file select an alternate cache file if it wants to.
+# Prefer an explicitly selected file to automatically selected ones.
+ac_site_file1=NONE
+ac_site_file2=NONE
+if test -n "$CONFIG_SITE"; then
+ # We do not want a PATH search for config.site.
+ case $CONFIG_SITE in #((
+ -*) ac_site_file1=./$CONFIG_SITE;;
+ */*) ac_site_file1=$CONFIG_SITE;;
+ *) ac_site_file1=./$CONFIG_SITE;;
+ esac
+elif test "x$prefix" != xNONE; then
+ ac_site_file1=$prefix/share/config.site
+ ac_site_file2=$prefix/etc/config.site
+else
+ ac_site_file1=$ac_default_prefix/share/config.site
+ ac_site_file2=$ac_default_prefix/etc/config.site
+fi
+for ac_site_file in "$ac_site_file1" "$ac_site_file2"
+do
+ test "x$ac_site_file" = xNONE && continue
+ if test /dev/null != "$ac_site_file" && test -r "$ac_site_file"; then
+ { $as_echo "$as_me:${as_lineno-$LINENO}: loading site script $ac_site_file" >&5
+$as_echo "$as_me: loading site script $ac_site_file" >&6;}
+ sed 's/^/| /' "$ac_site_file" >&5
+ . "$ac_site_file" \
+ || { { $as_echo "$as_me:${as_lineno-$LINENO}: error: in \`$ac_pwd':" >&5
+$as_echo "$as_me: error: in \`$ac_pwd':" >&2;}
+as_fn_error $? "failed to load site script $ac_site_file
+See \`config.log' for more details" "$LINENO" 5; }
+ fi
+done
+
+if test -r "$cache_file"; then
+ # Some versions of bash will fail to source /dev/null (special files
+ # actually), so we avoid doing that. DJGPP emulates it as a regular file.
+ if test /dev/null != "$cache_file" && test -f "$cache_file"; then
+ { $as_echo "$as_me:${as_lineno-$LINENO}: loading cache $cache_file" >&5
+$as_echo "$as_me: loading cache $cache_file" >&6;}
+ case $cache_file in
+ [\\/]* | ?:[\\/]* ) . "$cache_file";;
+ *) . "./$cache_file";;
+ esac
+ fi
+else
+ { $as_echo "$as_me:${as_lineno-$LINENO}: creating cache $cache_file" >&5
+$as_echo "$as_me: creating cache $cache_file" >&6;}
+ >$cache_file
+fi
+
+# Check that the precious variables saved in the cache have kept the same
+# value.
+ac_cache_corrupted=false
+for ac_var in $ac_precious_vars; do
+ eval ac_old_set=\$ac_cv_env_${ac_var}_set
+ eval ac_new_set=\$ac_env_${ac_var}_set
+ eval ac_old_val=\$ac_cv_env_${ac_var}_value
+ eval ac_new_val=\$ac_env_${ac_var}_value
+ case $ac_old_set,$ac_new_set in
+ set,)
+ { $as_echo "$as_me:${as_lineno-$LINENO}: error: \`$ac_var' was set to \`$ac_old_val' in the previous run" >&5
+$as_echo "$as_me: error: \`$ac_var' was set to \`$ac_old_val' in the previous run" >&2;}
+ ac_cache_corrupted=: ;;
+ ,set)
+ { $as_echo "$as_me:${as_lineno-$LINENO}: error: \`$ac_var' was not set in the previous run" >&5
+$as_echo "$as_me: error: \`$ac_var' was not set in the previous run" >&2;}
+ ac_cache_corrupted=: ;;
+ ,);;
+ *)
+ if test "x$ac_old_val" != "x$ac_new_val"; then
+ # differences in whitespace do not lead to failure.
+ ac_old_val_w=`echo x $ac_old_val`
+ ac_new_val_w=`echo x $ac_new_val`
+ if test "$ac_old_val_w" != "$ac_new_val_w"; then
+ { $as_echo "$as_me:${as_lineno-$LINENO}: error: \`$ac_var' has changed since the previous run:" >&5
+$as_echo "$as_me: error: \`$ac_var' has changed since the previous run:" >&2;}
+ ac_cache_corrupted=:
+ else
+ { $as_echo "$as_me:${as_lineno-$LINENO}: warning: ignoring whitespace changes in \`$ac_var' since the previous run:" >&5
+$as_echo "$as_me: warning: ignoring whitespace changes in \`$ac_var' since the previous run:" >&2;}
+ eval $ac_var=\$ac_old_val
+ fi
+ { $as_echo "$as_me:${as_lineno-$LINENO}: former value: \`$ac_old_val'" >&5
+$as_echo "$as_me: former value: \`$ac_old_val'" >&2;}
+ { $as_echo "$as_me:${as_lineno-$LINENO}: current value: \`$ac_new_val'" >&5
+$as_echo "$as_me: current value: \`$ac_new_val'" >&2;}
+ fi;;
+ esac
+ # Pass precious variables to config.status.
+ if test "$ac_new_set" = set; then
+ case $ac_new_val in
+ *\'*) ac_arg=$ac_var=`$as_echo "$ac_new_val" | sed "s/'/'\\\\\\\\''/g"` ;;
+ *) ac_arg=$ac_var=$ac_new_val ;;
+ esac
+ case " $ac_configure_args " in
+ *" '$ac_arg' "*) ;; # Avoid dups. Use of quotes ensures accuracy.
+ *) as_fn_append ac_configure_args " '$ac_arg'" ;;
+ esac
+ fi
+done
+if $ac_cache_corrupted; then
+ { $as_echo "$as_me:${as_lineno-$LINENO}: error: in \`$ac_pwd':" >&5
+$as_echo "$as_me: error: in \`$ac_pwd':" >&2;}
+ { $as_echo "$as_me:${as_lineno-$LINENO}: error: changes in the environment can compromise the build" >&5
+$as_echo "$as_me: error: changes in the environment can compromise the build" >&2;}
+ as_fn_error $? "run \`make distclean' and/or \`rm $cache_file' and start over" "$LINENO" 5
+fi
+## -------------------- ##
+## Main body of script. ##
+## -------------------- ##
+
+ac_ext=c
+ac_cpp='$CPP $CPPFLAGS'
+ac_compile='$CC -c $CFLAGS $CPPFLAGS conftest.$ac_ext >&5'
+ac_link='$CC -o conftest$ac_exeext $CFLAGS $CPPFLAGS $LDFLAGS conftest.$ac_ext $LIBS >&5'
+ac_compiler_gnu=$ac_cv_c_compiler_gnu
+
+
+
+
+
+
+: ${R_HOME=`R RHOME`}
+if test -z "${R_HOME}"; then
+ echo "could not determine R_HOME"
+ exit 1
+fi
+
+CC=`"${R_HOME}/bin/R" CMD config CC`
+CPP=`"${R_HOME}/bin/R" CMD config CPP`
+CFLAGS=`"${R_HOME}/bin/R" CMD config CFLAGS`
+CPPFLAGS=`"${R_HOME}/bin/R" CMD config CPPFLAGS`
+ac_ext=c
+ac_cpp='$CPP $CPPFLAGS'
+ac_compile='$CC -c $CFLAGS $CPPFLAGS conftest.$ac_ext >&5'
+ac_link='$CC -o conftest$ac_exeext $CFLAGS $CPPFLAGS $LDFLAGS conftest.$ac_ext $LIBS >&5'
+ac_compiler_gnu=$ac_cv_c_compiler_gnu
+if test -n "$ac_tool_prefix"; then
+ # Extract the first word of "${ac_tool_prefix}gcc", so it can be a program name with args.
+set dummy ${ac_tool_prefix}gcc; ac_word=$2
+{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for $ac_word" >&5
+$as_echo_n "checking for $ac_word... " >&6; }
+if ${ac_cv_prog_CC+:} false; then :
+ $as_echo_n "(cached) " >&6
+else
+ if test -n "$CC"; then
+ ac_cv_prog_CC="$CC" # Let the user override the test.
+else
+as_save_IFS=$IFS; IFS=$PATH_SEPARATOR
+for as_dir in $PATH
+do
+ IFS=$as_save_IFS
+ test -z "$as_dir" && as_dir=.
+ for ac_exec_ext in '' $ac_executable_extensions; do
+ if as_fn_executable_p "$as_dir/$ac_word$ac_exec_ext"; then
+ ac_cv_prog_CC="${ac_tool_prefix}gcc"
+ $as_echo "$as_me:${as_lineno-$LINENO}: found $as_dir/$ac_word$ac_exec_ext" >&5
+ break 2
+ fi
+done
+ done
+IFS=$as_save_IFS
+
+fi
+fi
+CC=$ac_cv_prog_CC
+if test -n "$CC"; then
+ { $as_echo "$as_me:${as_lineno-$LINENO}: result: $CC" >&5
+$as_echo "$CC" >&6; }
+else
+ { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5
+$as_echo "no" >&6; }
+fi
+
+
+fi
+if test -z "$ac_cv_prog_CC"; then
+ ac_ct_CC=$CC
+ # Extract the first word of "gcc", so it can be a program name with args.
+set dummy gcc; ac_word=$2
+{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for $ac_word" >&5
+$as_echo_n "checking for $ac_word... " >&6; }
+if ${ac_cv_prog_ac_ct_CC+:} false; then :
+ $as_echo_n "(cached) " >&6
+else
+ if test -n "$ac_ct_CC"; then
+ ac_cv_prog_ac_ct_CC="$ac_ct_CC" # Let the user override the test.
+else
+as_save_IFS=$IFS; IFS=$PATH_SEPARATOR
+for as_dir in $PATH
+do
+ IFS=$as_save_IFS
+ test -z "$as_dir" && as_dir=.
+ for ac_exec_ext in '' $ac_executable_extensions; do
+ if as_fn_executable_p "$as_dir/$ac_word$ac_exec_ext"; then
+ ac_cv_prog_ac_ct_CC="gcc"
+ $as_echo "$as_me:${as_lineno-$LINENO}: found $as_dir/$ac_word$ac_exec_ext" >&5
+ break 2
+ fi
+done
+ done
+IFS=$as_save_IFS
+
+fi
+fi
+ac_ct_CC=$ac_cv_prog_ac_ct_CC
+if test -n "$ac_ct_CC"; then
+ { $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_ct_CC" >&5
+$as_echo "$ac_ct_CC" >&6; }
+else
+ { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5
+$as_echo "no" >&6; }
+fi
+
+ if test "x$ac_ct_CC" = x; then
+ CC=""
+ else
+ case $cross_compiling:$ac_tool_warned in
+yes:)
+{ $as_echo "$as_me:${as_lineno-$LINENO}: WARNING: using cross tools not prefixed with host triplet" >&5
+$as_echo "$as_me: WARNING: using cross tools not prefixed with host triplet" >&2;}
+ac_tool_warned=yes ;;
+esac
+ CC=$ac_ct_CC
+ fi
+else
+ CC="$ac_cv_prog_CC"
+fi
+
+if test -z "$CC"; then
+ if test -n "$ac_tool_prefix"; then
+ # Extract the first word of "${ac_tool_prefix}cc", so it can be a program name with args.
+set dummy ${ac_tool_prefix}cc; ac_word=$2
+{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for $ac_word" >&5
+$as_echo_n "checking for $ac_word... " >&6; }
+if ${ac_cv_prog_CC+:} false; then :
+ $as_echo_n "(cached) " >&6
+else
+ if test -n "$CC"; then
+ ac_cv_prog_CC="$CC" # Let the user override the test.
+else
+as_save_IFS=$IFS; IFS=$PATH_SEPARATOR
+for as_dir in $PATH
+do
+ IFS=$as_save_IFS
+ test -z "$as_dir" && as_dir=.
+ for ac_exec_ext in '' $ac_executable_extensions; do
+ if as_fn_executable_p "$as_dir/$ac_word$ac_exec_ext"; then
+ ac_cv_prog_CC="${ac_tool_prefix}cc"
+ $as_echo "$as_me:${as_lineno-$LINENO}: found $as_dir/$ac_word$ac_exec_ext" >&5
+ break 2
+ fi
+done
+ done
+IFS=$as_save_IFS
+
+fi
+fi
+CC=$ac_cv_prog_CC
+if test -n "$CC"; then
+ { $as_echo "$as_me:${as_lineno-$LINENO}: result: $CC" >&5
+$as_echo "$CC" >&6; }
+else
+ { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5
+$as_echo "no" >&6; }
+fi
+
+
+ fi
+fi
+if test -z "$CC"; then
+ # Extract the first word of "cc", so it can be a program name with args.
+set dummy cc; ac_word=$2
+{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for $ac_word" >&5
+$as_echo_n "checking for $ac_word... " >&6; }
+if ${ac_cv_prog_CC+:} false; then :
+ $as_echo_n "(cached) " >&6
+else
+ if test -n "$CC"; then
+ ac_cv_prog_CC="$CC" # Let the user override the test.
+else
+ ac_prog_rejected=no
+as_save_IFS=$IFS; IFS=$PATH_SEPARATOR
+for as_dir in $PATH
+do
+ IFS=$as_save_IFS
+ test -z "$as_dir" && as_dir=.
+ for ac_exec_ext in '' $ac_executable_extensions; do
+ if as_fn_executable_p "$as_dir/$ac_word$ac_exec_ext"; then
+ if test "$as_dir/$ac_word$ac_exec_ext" = "/usr/ucb/cc"; then
+ ac_prog_rejected=yes
+ continue
+ fi
+ ac_cv_prog_CC="cc"
+ $as_echo "$as_me:${as_lineno-$LINENO}: found $as_dir/$ac_word$ac_exec_ext" >&5
+ break 2
+ fi
+done
+ done
+IFS=$as_save_IFS
+
+if test $ac_prog_rejected = yes; then
+ # We found a bogon in the path, so make sure we never use it.
+ set dummy $ac_cv_prog_CC
+ shift
+ if test $# != 0; then
+ # We chose a different compiler from the bogus one.
+ # However, it has the same basename, so the bogon will be chosen
+ # first if we set CC to just the basename; use the full file name.
+ shift
+ ac_cv_prog_CC="$as_dir/$ac_word${1+' '}$@"
+ fi
+fi
+fi
+fi
+CC=$ac_cv_prog_CC
+if test -n "$CC"; then
+ { $as_echo "$as_me:${as_lineno-$LINENO}: result: $CC" >&5
+$as_echo "$CC" >&6; }
+else
+ { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5
+$as_echo "no" >&6; }
+fi
+
+
+fi
+if test -z "$CC"; then
+ if test -n "$ac_tool_prefix"; then
+ for ac_prog in cl.exe
+ do
+ # Extract the first word of "$ac_tool_prefix$ac_prog", so it can be a program name with args.
+set dummy $ac_tool_prefix$ac_prog; ac_word=$2
+{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for $ac_word" >&5
+$as_echo_n "checking for $ac_word... " >&6; }
+if ${ac_cv_prog_CC+:} false; then :
+ $as_echo_n "(cached) " >&6
+else
+ if test -n "$CC"; then
+ ac_cv_prog_CC="$CC" # Let the user override the test.
+else
+as_save_IFS=$IFS; IFS=$PATH_SEPARATOR
+for as_dir in $PATH
+do
+ IFS=$as_save_IFS
+ test -z "$as_dir" && as_dir=.
+ for ac_exec_ext in '' $ac_executable_extensions; do
+ if as_fn_executable_p "$as_dir/$ac_word$ac_exec_ext"; then
+ ac_cv_prog_CC="$ac_tool_prefix$ac_prog"
+ $as_echo "$as_me:${as_lineno-$LINENO}: found $as_dir/$ac_word$ac_exec_ext" >&5
+ break 2
+ fi
+done
+ done
+IFS=$as_save_IFS
+
+fi
+fi
+CC=$ac_cv_prog_CC
+if test -n "$CC"; then
+ { $as_echo "$as_me:${as_lineno-$LINENO}: result: $CC" >&5
+$as_echo "$CC" >&6; }
+else
+ { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5
+$as_echo "no" >&6; }
+fi
+
+
+ test -n "$CC" && break
+ done
+fi
+if test -z "$CC"; then
+ ac_ct_CC=$CC
+ for ac_prog in cl.exe
+do
+ # Extract the first word of "$ac_prog", so it can be a program name with args.
+set dummy $ac_prog; ac_word=$2
+{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for $ac_word" >&5
+$as_echo_n "checking for $ac_word... " >&6; }
+if ${ac_cv_prog_ac_ct_CC+:} false; then :
+ $as_echo_n "(cached) " >&6
+else
+ if test -n "$ac_ct_CC"; then
+ ac_cv_prog_ac_ct_CC="$ac_ct_CC" # Let the user override the test.
+else
+as_save_IFS=$IFS; IFS=$PATH_SEPARATOR
+for as_dir in $PATH
+do
+ IFS=$as_save_IFS
+ test -z "$as_dir" && as_dir=.
+ for ac_exec_ext in '' $ac_executable_extensions; do
+ if as_fn_executable_p "$as_dir/$ac_word$ac_exec_ext"; then
+ ac_cv_prog_ac_ct_CC="$ac_prog"
+ $as_echo "$as_me:${as_lineno-$LINENO}: found $as_dir/$ac_word$ac_exec_ext" >&5
+ break 2
+ fi
+done
+ done
+IFS=$as_save_IFS
+
+fi
+fi
+ac_ct_CC=$ac_cv_prog_ac_ct_CC
+if test -n "$ac_ct_CC"; then
+ { $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_ct_CC" >&5
+$as_echo "$ac_ct_CC" >&6; }
+else
+ { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5
+$as_echo "no" >&6; }
+fi
+
+
+ test -n "$ac_ct_CC" && break
+done
+
+ if test "x$ac_ct_CC" = x; then
+ CC=""
+ else
+ case $cross_compiling:$ac_tool_warned in
+yes:)
+{ $as_echo "$as_me:${as_lineno-$LINENO}: WARNING: using cross tools not prefixed with host triplet" >&5
+$as_echo "$as_me: WARNING: using cross tools not prefixed with host triplet" >&2;}
+ac_tool_warned=yes ;;
+esac
+ CC=$ac_ct_CC
+ fi
+fi
+
+fi
+
+
+test -z "$CC" && { { $as_echo "$as_me:${as_lineno-$LINENO}: error: in \`$ac_pwd':" >&5
+$as_echo "$as_me: error: in \`$ac_pwd':" >&2;}
+as_fn_error $? "no acceptable C compiler found in \$PATH
+See \`config.log' for more details" "$LINENO" 5; }
+
+# Provide some information about the compiler.
+$as_echo "$as_me:${as_lineno-$LINENO}: checking for C compiler version" >&5
+set X $ac_compile
+ac_compiler=$2
+for ac_option in --version -v -V -qversion; do
+ { { ac_try="$ac_compiler $ac_option >&5"
+case "(($ac_try" in
+ *\"* | *\`* | *\\*) ac_try_echo=\$ac_try;;
+ *) ac_try_echo=$ac_try;;
+esac
+eval ac_try_echo="\"\$as_me:${as_lineno-$LINENO}: $ac_try_echo\""
+$as_echo "$ac_try_echo"; } >&5
+ (eval "$ac_compiler $ac_option >&5") 2>conftest.err
+ ac_status=$?
+ if test -s conftest.err; then
+ sed '10a\
+... rest of stderr output deleted ...
+ 10q' conftest.err >conftest.er1
+ cat conftest.er1 >&5
+ fi
+ rm -f conftest.er1 conftest.err
+ $as_echo "$as_me:${as_lineno-$LINENO}: \$? = $ac_status" >&5
+ test $ac_status = 0; }
+done
+
+cat confdefs.h - <<_ACEOF >conftest.$ac_ext
+/* end confdefs.h. */
+
+int
+main ()
+{
+
+ ;
+ return 0;
+}
+_ACEOF
+ac_clean_files_save=$ac_clean_files
+ac_clean_files="$ac_clean_files a.out a.out.dSYM a.exe b.out"
+# Try to create an executable without -o first, disregard a.out.
+# It will help us diagnose broken compilers, and finding out an intuition
+# of exeext.
+{ $as_echo "$as_me:${as_lineno-$LINENO}: checking whether the C compiler works" >&5
+$as_echo_n "checking whether the C compiler works... " >&6; }
+ac_link_default=`$as_echo "$ac_link" | sed 's/ -o *conftest[^ ]*//'`
+
+# The possible output files:
+ac_files="a.out conftest.exe conftest a.exe a_out.exe b.out conftest.*"
+
+ac_rmfiles=
+for ac_file in $ac_files
+do
+ case $ac_file in
+ *.$ac_ext | *.xcoff | *.tds | *.d | *.pdb | *.xSYM | *.bb | *.bbg | *.map | *.inf | *.dSYM | *.o | *.obj ) ;;
+ * ) ac_rmfiles="$ac_rmfiles $ac_file";;
+ esac
+done
+rm -f $ac_rmfiles
+
+if { { ac_try="$ac_link_default"
+case "(($ac_try" in
+ *\"* | *\`* | *\\*) ac_try_echo=\$ac_try;;
+ *) ac_try_echo=$ac_try;;
+esac
+eval ac_try_echo="\"\$as_me:${as_lineno-$LINENO}: $ac_try_echo\""
+$as_echo "$ac_try_echo"; } >&5
+ (eval "$ac_link_default") 2>&5
+ ac_status=$?
+ $as_echo "$as_me:${as_lineno-$LINENO}: \$? = $ac_status" >&5
+ test $ac_status = 0; }; then :
+ # Autoconf-2.13 could set the ac_cv_exeext variable to `no'.
+# So ignore a value of `no', otherwise this would lead to `EXEEXT = no'
+# in a Makefile. We should not override ac_cv_exeext if it was cached,
+# so that the user can short-circuit this test for compilers unknown to
+# Autoconf.
+for ac_file in $ac_files ''
+do
+ test -f "$ac_file" || continue
+ case $ac_file in
+ *.$ac_ext | *.xcoff | *.tds | *.d | *.pdb | *.xSYM | *.bb | *.bbg | *.map | *.inf | *.dSYM | *.o | *.obj )
+ ;;
+ [ab].out )
+ # We found the default executable, but exeext='' is most
+ # certainly right.
+ break;;
+ *.* )
+ if test "${ac_cv_exeext+set}" = set && test "$ac_cv_exeext" != no;
+ then :; else
+ ac_cv_exeext=`expr "$ac_file" : '[^.]*\(\..*\)'`
+ fi
+ # We set ac_cv_exeext here because the later test for it is not
+ # safe: cross compilers may not add the suffix if given an `-o'
+ # argument, so we may need to know it at that point already.
+ # Even if this section looks crufty: it has the advantage of
+ # actually working.
+ break;;
+ * )
+ break;;
+ esac
+done
+test "$ac_cv_exeext" = no && ac_cv_exeext=
+
+else
+ ac_file=''
+fi
+if test -z "$ac_file"; then :
+ { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5
+$as_echo "no" >&6; }
+$as_echo "$as_me: failed program was:" >&5
+sed 's/^/| /' conftest.$ac_ext >&5
+
+{ { $as_echo "$as_me:${as_lineno-$LINENO}: error: in \`$ac_pwd':" >&5
+$as_echo "$as_me: error: in \`$ac_pwd':" >&2;}
+as_fn_error 77 "C compiler cannot create executables
+See \`config.log' for more details" "$LINENO" 5; }
+else
+ { $as_echo "$as_me:${as_lineno-$LINENO}: result: yes" >&5
+$as_echo "yes" >&6; }
+fi
+{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for C compiler default output file name" >&5
+$as_echo_n "checking for C compiler default output file name... " >&6; }
+{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_file" >&5
+$as_echo "$ac_file" >&6; }
+ac_exeext=$ac_cv_exeext
+
+rm -f -r a.out a.out.dSYM a.exe conftest$ac_cv_exeext b.out
+ac_clean_files=$ac_clean_files_save
+{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for suffix of executables" >&5
+$as_echo_n "checking for suffix of executables... " >&6; }
+if { { ac_try="$ac_link"
+case "(($ac_try" in
+ *\"* | *\`* | *\\*) ac_try_echo=\$ac_try;;
+ *) ac_try_echo=$ac_try;;
+esac
+eval ac_try_echo="\"\$as_me:${as_lineno-$LINENO}: $ac_try_echo\""
+$as_echo "$ac_try_echo"; } >&5
+ (eval "$ac_link") 2>&5
+ ac_status=$?
+ $as_echo "$as_me:${as_lineno-$LINENO}: \$? = $ac_status" >&5
+ test $ac_status = 0; }; then :
+ # If both `conftest.exe' and `conftest' are `present' (well, observable)
+# catch `conftest.exe'. For instance with Cygwin, `ls conftest' will
+# work properly (i.e., refer to `conftest.exe'), while it won't with
+# `rm'.
+for ac_file in conftest.exe conftest conftest.*; do
+ test -f "$ac_file" || continue
+ case $ac_file in
+ *.$ac_ext | *.xcoff | *.tds | *.d | *.pdb | *.xSYM | *.bb | *.bbg | *.map | *.inf | *.dSYM | *.o | *.obj ) ;;
+ *.* ) ac_cv_exeext=`expr "$ac_file" : '[^.]*\(\..*\)'`
+ break;;
+ * ) break;;
+ esac
+done
+else
+ { { $as_echo "$as_me:${as_lineno-$LINENO}: error: in \`$ac_pwd':" >&5
+$as_echo "$as_me: error: in \`$ac_pwd':" >&2;}
+as_fn_error $? "cannot compute suffix of executables: cannot compile and link
+See \`config.log' for more details" "$LINENO" 5; }
+fi
+rm -f conftest conftest$ac_cv_exeext
+{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_exeext" >&5
+$as_echo "$ac_cv_exeext" >&6; }
+
+rm -f conftest.$ac_ext
+EXEEXT=$ac_cv_exeext
+ac_exeext=$EXEEXT
+cat confdefs.h - <<_ACEOF >conftest.$ac_ext
+/* end confdefs.h. */
+#include <stdio.h>
+int
+main ()
+{
+FILE *f = fopen ("conftest.out", "w");
+ return ferror (f) || fclose (f) != 0;
+
+ ;
+ return 0;
+}
+_ACEOF
+ac_clean_files="$ac_clean_files conftest.out"
+# Check that the compiler produces executables we can run. If not, either
+# the compiler is broken, or we cross compile.
+{ $as_echo "$as_me:${as_lineno-$LINENO}: checking whether we are cross compiling" >&5
+$as_echo_n "checking whether we are cross compiling... " >&6; }
+if test "$cross_compiling" != yes; then
+ { { ac_try="$ac_link"
+case "(($ac_try" in
+ *\"* | *\`* | *\\*) ac_try_echo=\$ac_try;;
+ *) ac_try_echo=$ac_try;;
+esac
+eval ac_try_echo="\"\$as_me:${as_lineno-$LINENO}: $ac_try_echo\""
+$as_echo "$ac_try_echo"; } >&5
+ (eval "$ac_link") 2>&5
+ ac_status=$?
+ $as_echo "$as_me:${as_lineno-$LINENO}: \$? = $ac_status" >&5
+ test $ac_status = 0; }
+ if { ac_try='./conftest$ac_cv_exeext'
+ { { case "(($ac_try" in
+ *\"* | *\`* | *\\*) ac_try_echo=\$ac_try;;
+ *) ac_try_echo=$ac_try;;
+esac
+eval ac_try_echo="\"\$as_me:${as_lineno-$LINENO}: $ac_try_echo\""
+$as_echo "$ac_try_echo"; } >&5
+ (eval "$ac_try") 2>&5
+ ac_status=$?
+ $as_echo "$as_me:${as_lineno-$LINENO}: \$? = $ac_status" >&5
+ test $ac_status = 0; }; }; then
+ cross_compiling=no
+ else
+ if test "$cross_compiling" = maybe; then
+ cross_compiling=yes
+ else
+ { { $as_echo "$as_me:${as_lineno-$LINENO}: error: in \`$ac_pwd':" >&5
+$as_echo "$as_me: error: in \`$ac_pwd':" >&2;}
+as_fn_error $? "cannot run C compiled programs.
+If you meant to cross compile, use \`--host'.
+See \`config.log' for more details" "$LINENO" 5; }
+ fi
+ fi
+fi
+{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $cross_compiling" >&5
+$as_echo "$cross_compiling" >&6; }
+
+rm -f conftest.$ac_ext conftest$ac_cv_exeext conftest.out
+ac_clean_files=$ac_clean_files_save
+{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for suffix of object files" >&5
+$as_echo_n "checking for suffix of object files... " >&6; }
+if ${ac_cv_objext+:} false; then :
+ $as_echo_n "(cached) " >&6
+else
+ cat confdefs.h - <<_ACEOF >conftest.$ac_ext
+/* end confdefs.h. */
+
+int
+main ()
+{
+
+ ;
+ return 0;
+}
+_ACEOF
+rm -f conftest.o conftest.obj
+if { { ac_try="$ac_compile"
+case "(($ac_try" in
+ *\"* | *\`* | *\\*) ac_try_echo=\$ac_try;;
+ *) ac_try_echo=$ac_try;;
+esac
+eval ac_try_echo="\"\$as_me:${as_lineno-$LINENO}: $ac_try_echo\""
+$as_echo "$ac_try_echo"; } >&5
+ (eval "$ac_compile") 2>&5
+ ac_status=$?
+ $as_echo "$as_me:${as_lineno-$LINENO}: \$? = $ac_status" >&5
+ test $ac_status = 0; }; then :
+ for ac_file in conftest.o conftest.obj conftest.*; do
+ test -f "$ac_file" || continue;
+ case $ac_file in
+ *.$ac_ext | *.xcoff | *.tds | *.d | *.pdb | *.xSYM | *.bb | *.bbg | *.map | *.inf | *.dSYM ) ;;
+ *) ac_cv_objext=`expr "$ac_file" : '.*\.\(.*\)'`
+ break;;
+ esac
+done
+else
+ $as_echo "$as_me: failed program was:" >&5
+sed 's/^/| /' conftest.$ac_ext >&5
+
+{ { $as_echo "$as_me:${as_lineno-$LINENO}: error: in \`$ac_pwd':" >&5
+$as_echo "$as_me: error: in \`$ac_pwd':" >&2;}
+as_fn_error $? "cannot compute suffix of object files: cannot compile
+See \`config.log' for more details" "$LINENO" 5; }
+fi
+rm -f conftest.$ac_cv_objext conftest.$ac_ext
+fi
+{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_objext" >&5
+$as_echo "$ac_cv_objext" >&6; }
+OBJEXT=$ac_cv_objext
+ac_objext=$OBJEXT
+{ $as_echo "$as_me:${as_lineno-$LINENO}: checking whether we are using the GNU C compiler" >&5
+$as_echo_n "checking whether we are using the GNU C compiler... " >&6; }
+if ${ac_cv_c_compiler_gnu+:} false; then :
+ $as_echo_n "(cached) " >&6
+else
+ cat confdefs.h - <<_ACEOF >conftest.$ac_ext
+/* end confdefs.h. */
+
+int
+main ()
+{
+#ifndef __GNUC__
+ choke me
+#endif
+
+ ;
+ return 0;
+}
+_ACEOF
+if ac_fn_c_try_compile "$LINENO"; then :
+ ac_compiler_gnu=yes
+else
+ ac_compiler_gnu=no
+fi
+rm -f core conftest.err conftest.$ac_objext conftest.$ac_ext
+ac_cv_c_compiler_gnu=$ac_compiler_gnu
+
+fi
+{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_c_compiler_gnu" >&5
+$as_echo "$ac_cv_c_compiler_gnu" >&6; }
+if test $ac_compiler_gnu = yes; then
+ GCC=yes
+else
+ GCC=
+fi
+ac_test_CFLAGS=${CFLAGS+set}
+ac_save_CFLAGS=$CFLAGS
+{ $as_echo "$as_me:${as_lineno-$LINENO}: checking whether $CC accepts -g" >&5
+$as_echo_n "checking whether $CC accepts -g... " >&6; }
+if ${ac_cv_prog_cc_g+:} false; then :
+ $as_echo_n "(cached) " >&6
+else
+ ac_save_c_werror_flag=$ac_c_werror_flag
+ ac_c_werror_flag=yes
+ ac_cv_prog_cc_g=no
+ CFLAGS="-g"
+ cat confdefs.h - <<_ACEOF >conftest.$ac_ext
+/* end confdefs.h. */
+
+int
+main ()
+{
+
+ ;
+ return 0;
+}
+_ACEOF
+if ac_fn_c_try_compile "$LINENO"; then :
+ ac_cv_prog_cc_g=yes
+else
+ CFLAGS=""
+ cat confdefs.h - <<_ACEOF >conftest.$ac_ext
+/* end confdefs.h. */
+
+int
+main ()
+{
+
+ ;
+ return 0;
+}
+_ACEOF
+if ac_fn_c_try_compile "$LINENO"; then :
+
+else
+ ac_c_werror_flag=$ac_save_c_werror_flag
+ CFLAGS="-g"
+ cat confdefs.h - <<_ACEOF >conftest.$ac_ext
+/* end confdefs.h. */
+
+int
+main ()
+{
+
+ ;
+ return 0;
+}
+_ACEOF
+if ac_fn_c_try_compile "$LINENO"; then :
+ ac_cv_prog_cc_g=yes
+fi
+rm -f core conftest.err conftest.$ac_objext conftest.$ac_ext
+fi
+rm -f core conftest.err conftest.$ac_objext conftest.$ac_ext
+fi
+rm -f core conftest.err conftest.$ac_objext conftest.$ac_ext
+ ac_c_werror_flag=$ac_save_c_werror_flag
+fi
+{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_prog_cc_g" >&5
+$as_echo "$ac_cv_prog_cc_g" >&6; }
+if test "$ac_test_CFLAGS" = set; then
+ CFLAGS=$ac_save_CFLAGS
+elif test $ac_cv_prog_cc_g = yes; then
+ if test "$GCC" = yes; then
+ CFLAGS="-g -O2"
+ else
+ CFLAGS="-g"
+ fi
+else
+ if test "$GCC" = yes; then
+ CFLAGS="-O2"
+ else
+ CFLAGS=
+ fi
+fi
+{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for $CC option to accept ISO C89" >&5
+$as_echo_n "checking for $CC option to accept ISO C89... " >&6; }
+if ${ac_cv_prog_cc_c89+:} false; then :
+ $as_echo_n "(cached) " >&6
+else
+ ac_cv_prog_cc_c89=no
+ac_save_CC=$CC
+cat confdefs.h - <<_ACEOF >conftest.$ac_ext
+/* end confdefs.h. */
+#include <stdarg.h>
+#include <stdio.h>
+struct stat;
+/* Most of the following tests are stolen from RCS 5.7's src/conf.sh. */
+struct buf { int x; };
+FILE * (*rcsopen) (struct buf *, struct stat *, int);
+static char *e (p, i)
+ char **p;
+ int i;
+{
+ return p[i];
+}
+static char *f (char * (*g) (char **, int), char **p, ...)
+{
+ char *s;
+ va_list v;
+ va_start (v,p);
+ s = g (p, va_arg (v,int));
+ va_end (v);
+ return s;
+}
+
+/* OSF 4.0 Compaq cc is some sort of almost-ANSI by default. It has
+ function prototypes and stuff, but not '\xHH' hex character constants.
+ These don't provoke an error unfortunately, instead are silently treated
+ as 'x'. The following induces an error, until -std is added to get
+ proper ANSI mode. Curiously '\x00'!='x' always comes out true, for an
+ array size at least. It's necessary to write '\x00'==0 to get something
+ that's true only with -std. */
+int osf4_cc_array ['\x00' == 0 ? 1 : -1];
+
+/* IBM C 6 for AIX is almost-ANSI by default, but it replaces macro parameters
+ inside strings and character constants. */
+#define FOO(x) 'x'
+int xlc6_cc_array[FOO(a) == 'x' ? 1 : -1];
+
+int test (int i, double x);
+struct s1 {int (*f) (int a);};
+struct s2 {int (*f) (double a);};
+int pairnames (int, char **, FILE *(*)(struct buf *, struct stat *, int), int, int);
+int argc;
+char **argv;
+int
+main ()
+{
+return f (e, argv, 0) != argv[0] || f (e, argv, 1) != argv[1];
+ ;
+ return 0;
+}
+_ACEOF
+for ac_arg in '' -qlanglvl=extc89 -qlanglvl=ansi -std \
+ -Ae "-Aa -D_HPUX_SOURCE" "-Xc -D__EXTENSIONS__"
+do
+ CC="$ac_save_CC $ac_arg"
+ if ac_fn_c_try_compile "$LINENO"; then :
+ ac_cv_prog_cc_c89=$ac_arg
+fi
+rm -f core conftest.err conftest.$ac_objext
+ test "x$ac_cv_prog_cc_c89" != "xno" && break
+done
+rm -f conftest.$ac_ext
+CC=$ac_save_CC
+
+fi
+# AC_CACHE_VAL
+case "x$ac_cv_prog_cc_c89" in
+ x)
+ { $as_echo "$as_me:${as_lineno-$LINENO}: result: none needed" >&5
+$as_echo "none needed" >&6; } ;;
+ xno)
+ { $as_echo "$as_me:${as_lineno-$LINENO}: result: unsupported" >&5
+$as_echo "unsupported" >&6; } ;;
+ *)
+ CC="$CC $ac_cv_prog_cc_c89"
+ { $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_prog_cc_c89" >&5
+$as_echo "$ac_cv_prog_cc_c89" >&6; } ;;
+esac
+if test "x$ac_cv_prog_cc_c89" != xno; then :
+
+fi
+
+ac_ext=c
+ac_cpp='$CPP $CPPFLAGS'
+ac_compile='$CC -c $CFLAGS $CPPFLAGS conftest.$ac_ext >&5'
+ac_link='$CC -o conftest$ac_exeext $CFLAGS $CPPFLAGS $LDFLAGS conftest.$ac_ext $LIBS >&5'
+ac_compiler_gnu=$ac_cv_c_compiler_gnu
+
+ac_ext=c
+ac_cpp='$CPP $CPPFLAGS'
+ac_compile='$CC -c $CFLAGS $CPPFLAGS conftest.$ac_ext >&5'
+ac_link='$CC -o conftest$ac_exeext $CFLAGS $CPPFLAGS $LDFLAGS conftest.$ac_ext $LIBS >&5'
+ac_compiler_gnu=$ac_cv_c_compiler_gnu
+{ $as_echo "$as_me:${as_lineno-$LINENO}: checking how to run the C preprocessor" >&5
+$as_echo_n "checking how to run the C preprocessor... " >&6; }
+# On Suns, sometimes $CPP names a directory.
+if test -n "$CPP" && test -d "$CPP"; then
+ CPP=
+fi
+if test -z "$CPP"; then
+ if ${ac_cv_prog_CPP+:} false; then :
+ $as_echo_n "(cached) " >&6
+else
+ # Double quotes because CPP needs to be expanded
+ for CPP in "$CC -E" "$CC -E -traditional-cpp" "/lib/cpp"
+ do
+ ac_preproc_ok=false
+for ac_c_preproc_warn_flag in '' yes
+do
+ # Use a header file that comes with gcc, so configuring glibc
+ # with a fresh cross-compiler works.
+ # Prefer <limits.h> to <assert.h> if __STDC__ is defined, since
+ # <limits.h> exists even on freestanding compilers.
+ # On the NeXT, cc -E runs the code through the compiler's parser,
+ # not just through cpp. "Syntax error" is here to catch this case.
+ cat confdefs.h - <<_ACEOF >conftest.$ac_ext
+/* end confdefs.h. */
+#ifdef __STDC__
+# include <limits.h>
+#else
+# include <assert.h>
+#endif
+ Syntax error
+_ACEOF
+if ac_fn_c_try_cpp "$LINENO"; then :
+
+else
+ # Broken: fails on valid input.
+continue
+fi
+rm -f conftest.err conftest.i conftest.$ac_ext
+
+ # OK, works on sane cases. Now check whether nonexistent headers
+ # can be detected and how.
+ cat confdefs.h - <<_ACEOF >conftest.$ac_ext
+/* end confdefs.h. */
+#include <ac_nonexistent.h>
+_ACEOF
+if ac_fn_c_try_cpp "$LINENO"; then :
+ # Broken: success on invalid input.
+continue
+else
+ # Passes both tests.
+ac_preproc_ok=:
+break
+fi
+rm -f conftest.err conftest.i conftest.$ac_ext
+
+done
+# Because of `break', _AC_PREPROC_IFELSE's cleaning code was skipped.
+rm -f conftest.i conftest.err conftest.$ac_ext
+if $ac_preproc_ok; then :
+ break
+fi
+
+ done
+ ac_cv_prog_CPP=$CPP
+
+fi
+ CPP=$ac_cv_prog_CPP
+else
+ ac_cv_prog_CPP=$CPP
+fi
+{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $CPP" >&5
+$as_echo "$CPP" >&6; }
+ac_preproc_ok=false
+for ac_c_preproc_warn_flag in '' yes
+do
+ # Use a header file that comes with gcc, so configuring glibc
+ # with a fresh cross-compiler works.
+ # Prefer <limits.h> to <assert.h> if __STDC__ is defined, since
+ # <limits.h> exists even on freestanding compilers.
+ # On the NeXT, cc -E runs the code through the compiler's parser,
+ # not just through cpp. "Syntax error" is here to catch this case.
+ cat confdefs.h - <<_ACEOF >conftest.$ac_ext
+/* end confdefs.h. */
+#ifdef __STDC__
+# include <limits.h>
+#else
+# include <assert.h>
+#endif
+ Syntax error
+_ACEOF
+if ac_fn_c_try_cpp "$LINENO"; then :
+
+else
+ # Broken: fails on valid input.
+continue
+fi
+rm -f conftest.err conftest.i conftest.$ac_ext
+
+ # OK, works on sane cases. Now check whether nonexistent headers
+ # can be detected and how.
+ cat confdefs.h - <<_ACEOF >conftest.$ac_ext
+/* end confdefs.h. */
+#include <ac_nonexistent.h>
+_ACEOF
+if ac_fn_c_try_cpp "$LINENO"; then :
+ # Broken: success on invalid input.
+continue
+else
+ # Passes both tests.
+ac_preproc_ok=:
+break
+fi
+rm -f conftest.err conftest.i conftest.$ac_ext
+
+done
+# Because of `break', _AC_PREPROC_IFELSE's cleaning code was skipped.
+rm -f conftest.i conftest.err conftest.$ac_ext
+if $ac_preproc_ok; then :
+
+else
+ { { $as_echo "$as_me:${as_lineno-$LINENO}: error: in \`$ac_pwd':" >&5
+$as_echo "$as_me: error: in \`$ac_pwd':" >&2;}
+as_fn_error $? "C preprocessor \"$CPP\" fails sanity check
+See \`config.log' for more details" "$LINENO" 5; }
+fi
+
+ac_ext=c
+ac_cpp='$CPP $CPPFLAGS'
+ac_compile='$CC -c $CFLAGS $CPPFLAGS conftest.$ac_ext >&5'
+ac_link='$CC -o conftest$ac_exeext $CFLAGS $CPPFLAGS $LDFLAGS conftest.$ac_ext $LIBS >&5'
+ac_compiler_gnu=$ac_cv_c_compiler_gnu
+
+
+
+
+ARGS_OK="FALSE"
+
+if test -n "$PKG_CPPFLAGS" -a -n "$PKG_LIBS" ; then
+ ARGS_OK="TRUE"
+else
+ if test -n "$PKG_CPPFLAGS" -o -n "$PKG_LIBS" ; then
+ as_fn_error $? "Please set both variables: PKG_CPPFLAGS AND PKG_LIBS" "$LINENO" 5
+ fi
+fi
+
+
+
+
+# Check whether --with-clp-include was given.
+if test "${with_clp_include+set}" = set; then :
+ withval=$with_clp_include; CLP_INCLUDE=$withval
+else
+ CLP_INCLUDE=""
+fi
+
+
+
+# Check whether --with-clp-lib was given.
+if test "${with_clp_lib+set}" = set; then :
+ withval=$with_clp_lib; CLP_LIB=$withval
+else
+ CLP_LIB=""
+fi
+
+
+
+
+if test "$ARGS_OK" = "FALSE" ; then
+ # Extract the first word of "pkg-config", so it can be a program name with args.
+set dummy pkg-config; ac_word=$2
+{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for $ac_word" >&5
+$as_echo_n "checking for $ac_word... " >&6; }
+if ${ac_cv_path_PKG_CONFIG+:} false; then :
+ $as_echo_n "(cached) " >&6
+else
+ case $PKG_CONFIG in
+ [\\/]* | ?:[\\/]*)
+ ac_cv_path_PKG_CONFIG="$PKG_CONFIG" # Let the user override the test with a path.
+ ;;
+ *)
+ as_save_IFS=$IFS; IFS=$PATH_SEPARATOR
+as_dummy="$PATH:/usr/local/bin"
+for as_dir in $as_dummy
+do
+ IFS=$as_save_IFS
+ test -z "$as_dir" && as_dir=.
+ for ac_exec_ext in '' $ac_executable_extensions; do
+ if as_fn_executable_p "$as_dir/$ac_word$ac_exec_ext"; then
+ ac_cv_path_PKG_CONFIG="$as_dir/$ac_word$ac_exec_ext"
+ $as_echo "$as_me:${as_lineno-$LINENO}: found $as_dir/$ac_word$ac_exec_ext" >&5
+ break 2
+ fi
+done
+ done
+IFS=$as_save_IFS
+
+ ;;
+esac
+fi
+PKG_CONFIG=$ac_cv_path_PKG_CONFIG
+if test -n "$PKG_CONFIG"; then
+ { $as_echo "$as_me:${as_lineno-$LINENO}: result: $PKG_CONFIG" >&5
+$as_echo "$PKG_CONFIG" >&6; }
+else
+ { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5
+$as_echo "no" >&6; }
+fi
+
+
+
+ if test "${PKG_CONFIG}" != "" ; then
+ if "${PKG_CONFIG}" --exists clp; then
+
+ CLP_LIBS=`${PKG_CONFIG} --libs clp`
+ CLP_CFLAGS=`${PKG_CONFIG} --cflags clp`
+
+ if test -z "$CLP_LIBS" -a -z "$CLP_CFLAGS" ; then
+ { $as_echo "$as_me:${as_lineno-$LINENO}: can not get information about clp from pkg-config" >&5
+$as_echo "$as_me: can not get information about clp from pkg-config" >&6;}
+ else
+ { $as_echo "$as_me:${as_lineno-$LINENO}: set compile and link flags according to pkg-config" >&5
+$as_echo "$as_me: set compile and link flags according to pkg-config" >&6;}
+ { $as_echo "$as_me:${as_lineno-$LINENO}: compile flags are $CLP_CFLAGS" >&5
+$as_echo "$as_me: compile flags are $CLP_CFLAGS" >&6;}
+ { $as_echo "$as_me:${as_lineno-$LINENO}: link flags are $CLP_LIBS" >&5
+$as_echo "$as_me: link flags are $CLP_LIBS" >&6;}
+ PKG_LIBS="${CLP_LIBS}"
+ PKG_CPPFLAGS="${CLP_CFLAGS}"
+ ARGS_OK="TRUE"
+ fi
+ else
+ { $as_echo "$as_me:${as_lineno-$LINENO}: pkg-config file for clp is not available" >&5
+$as_echo "$as_me: pkg-config file for clp is not available" >&6;}
+ fi
+ fi
+fi
+
+
+
+
+if test "$ARGS_OK" = "FALSE" ; then
+
+ if test -n "$CLP_INCLUDE" -a -n "$CLP_LIB" ; then
+
+ if test -d "$CLP_INCLUDE" ; then
+ if test -d "$CLP_INCLUDE/coin" ; then
+ PKG_CPPFLAGS="-I${CLP_INCLUDE} -I${CLP_INCLUDE}/coin"
+ else
+ PKG_CPPFLAGS="-I${CLP_INCLUDE}"
+ fi
+ else
+ as_fn_error $? "directory $CLP_INCLUDE does not exist" "$LINENO" 5
+ fi
+
+ if test -d "$CLP_LIB" ; then
+ if test -d "$CLP_LIB/coin" ; then
+ PKG_LIBS="-L${CLP_LIB} -L${CLP_LIB}/coin"
+ else
+ PKG_LIBS="-L${CLP_LIB}"
+ fi
+ else
+ as_fn_error $? "directory $CLP_LIB does not exist" "$LINENO" 5
+ fi
+
+ else
+
+
+ if test "x$prefix" = xNONE; then
+ $as_echo_n "checking for prefix by " >&6
+ # Extract the first word of "clp", so it can be a program name with args.
+set dummy clp; ac_word=$2
+{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for $ac_word" >&5
+$as_echo_n "checking for $ac_word... " >&6; }
+if ${ac_cv_path_ac_prefix_program+:} false; then :
+ $as_echo_n "(cached) " >&6
+else
+ case $ac_prefix_program in
+ [\\/]* | ?:[\\/]*)
+ ac_cv_path_ac_prefix_program="$ac_prefix_program" # Let the user override the test with a path.
+ ;;
+ *)
+ as_save_IFS=$IFS; IFS=$PATH_SEPARATOR
+for as_dir in $PATH
+do
+ IFS=$as_save_IFS
+ test -z "$as_dir" && as_dir=.
+ for ac_exec_ext in '' $ac_executable_extensions; do
+ if as_fn_executable_p "$as_dir/$ac_word$ac_exec_ext"; then
+ ac_cv_path_ac_prefix_program="$as_dir/$ac_word$ac_exec_ext"
+ $as_echo "$as_me:${as_lineno-$LINENO}: found $as_dir/$ac_word$ac_exec_ext" >&5
+ break 2
+ fi
+done
+ done
+IFS=$as_save_IFS
+
+ ;;
+esac
+fi
+ac_prefix_program=$ac_cv_path_ac_prefix_program
+if test -n "$ac_prefix_program"; then
+ { $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_prefix_program" >&5
+$as_echo "$ac_prefix_program" >&6; }
+else
+ { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5
+$as_echo "no" >&6; }
+fi
+
+
+ if test -n "$ac_prefix_program"; then
+ prefix=`$as_dirname -- "$ac_prefix_program" ||
+$as_expr X"$ac_prefix_program" : 'X\(.*[^/]\)//*[^/][^/]*/*$' \| \
+ X"$ac_prefix_program" : 'X\(//\)[^/]' \| \
+ X"$ac_prefix_program" : 'X\(//\)$' \| \
+ X"$ac_prefix_program" : 'X\(/\)' \| . 2>/dev/null ||
+$as_echo X"$ac_prefix_program" |
+ sed '/^X\(.*[^/]\)\/\/*[^/][^/]*\/*$/{
+ s//\1/
+ q
+ }
+ /^X\(\/\/\)[^/].*/{
+ s//\1/
+ q
+ }
+ /^X\(\/\/\)$/{
+ s//\1/
+ q
+ }
+ /^X\(\/\).*/{
+ s//\1/
+ q
+ }
+ s/.*/./; q'`
+ prefix=`$as_dirname -- "$prefix" ||
+$as_expr X"$prefix" : 'X\(.*[^/]\)//*[^/][^/]*/*$' \| \
+ X"$prefix" : 'X\(//\)[^/]' \| \
+ X"$prefix" : 'X\(//\)$' \| \
+ X"$prefix" : 'X\(/\)' \| . 2>/dev/null ||
+$as_echo X"$prefix" |
+ sed '/^X\(.*[^/]\)\/\/*[^/][^/]*\/*$/{
+ s//\1/
+ q
+ }
+ /^X\(\/\/\)[^/].*/{
+ s//\1/
+ q
+ }
+ /^X\(\/\/\)$/{
+ s//\1/
+ q
+ }
+ /^X\(\/\).*/{
+ s//\1/
+ q
+ }
+ s/.*/./; q'`
+ fi
+fi
+
+
+ if test "$prefix" = "NONE" ; then
+
+ { $as_echo "$as_me:${as_lineno-$LINENO}: No prefix given, trying /usr and /usr/local" >&5
+$as_echo "$as_me: No prefix given, trying /usr and /usr/local" >&6;}
+
+ if test -d "/usr/include" -o -d "/usr/local/include" ; then
+ PKG_CPPFLAGS="-I/usr/include -I/usr/local/include -I/usr/include/coin -I/usr/local/include/coin"
+ else
+ as_fn_error $? "directories /usr/include and /usr/local/include do not exist" "$LINENO" 5
+ fi
+
+ if test -d "/usr/local/lib" -o -d "/usr/local/lib64" -o -d "/usr/lib" -o -d "/usr/lib64" ; then
+ PKG_LIBS=""
+ if test -d "/usr/local/lib" ; then
+ PKG_LIBS="$PKG_LIBS -L/usr/local/lib"
+ if test -d "/usr/local/lib/coin" ; then
+ PKG_LIBS="$PKG_LIBS -L/usr/local/lib/coin"
+ fi
+ fi
+ if test -d "/usr/local/lib64" ; then
+ PKG_LIBS="$PKG_LIBS -L/usr/local/lib64"
+ if test -d "/usr/local/lib64/coin" ; then
+ PKG_LIBS="$PKG_LIBS -L/usr/local/lib64/coin"
+ fi
+ fi
+ if test -d "/usr/lib" ; then
+ PKG_LIBS="$PKG_LIBS -L/usr/lib"
+ if test -d "/usr/lib/coin" ; then
+ PKG_LIBS="$PKG_LIBS -L/usr/lib/coin"
+ fi
+ fi
+ if test -d "/usr/lib64" ; then
+ PKG_LIBS="$PKG_LIBS -L/usr/lib64"
+ if test -d "/usr/lib64/coin" ; then
+ PKG_LIBS="$PKG_LIBS -L/usr/lib64/coin"
+ fi
+ fi
+ # PKG_LIBS="-L/usr/local/lib -Wl,-rpath /usr/local/lib"
+ else
+ as_fn_error $? "none of the directories /usr/local/lib, /usr/local/lib64, /usr/lib of /usr/lib64 exists" "$LINENO" 5
+ fi
+
+ else
+
+ { $as_echo "$as_me:${as_lineno-$LINENO}: found executable clp in $prefix" >&5
+$as_echo "$as_me: found executable clp in $prefix" >&6;}
+
+ if test -d "$prefix/include" ; then
+ PKG_CPPFLAGS="-I$prefix/include"
+ if test -d "$prefix/include/coin" ; then
+ PKG_CPPFLAGS="$PKG_CPPFLAGS -I$prefix/include/coin"
+ fi
+ else
+ as_fn_error $? "directory $prefix/include does not exist" "$LINENO" 5
+ fi
+
+ if test -d "$prefix/lib" -o -d "$prefix/lib64" ; then
+ PKG_LIBS=""
+ if test -d "$prefix/lib" ; then
+ PKG_LIBS="$PKG_LIBS -L$prefix/lib"
+ if test -d "$prefix/lib/coin" ; then
+ PKG_LIBS="$PKG_LIBS -L$prefix/lib/coin"
+ fi
+ fi
+ if test -d "$prefix/lib64" ; then
+ PKG_LIBS="$PKG_LIBS -L$prefix/lib64"
+ if test -d "$prefix/lib64/coin" ; then
+ PKG_LIBS="$PKG_LIBS -L$prefix/lib64/coin"
+ fi
+ fi
+ else
+ as_fn_error $? "neither $prefix/lib nor $prefix/lib64 exist" "$LINENO" 5
+ fi
+
+ fi
+
+ fi
+
+ PKG_LIBS="${PKG_LIBS} -lClp -lCoinUtils -lm"
+
+ ARGS_OK="TRUE"
+fi
+
+
+
+if test -z "$PKG_CFLAGS" ; then
+ if test "${R_ARCH}" = "/x86_64" ; then
+ PKG_CFLAGS="-m64"
+ elif test "${R_ARCH}" = "/i386" ; then
+ PKG_CFLAGS="-m32"
+ else
+ PKG_CFLAGS=""
+ fi
+fi
+
+
+
+LIBS="${PKG_LIBS}"
+CFLAGS="${CFLAGS} ${PKG_CFLAGS}"
+CPPFLAGS="${CPPFLAGS} ${PKG_CPPFLAGS}"
+
+
+
+{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for grep that handles long lines and -e" >&5
+$as_echo_n "checking for grep that handles long lines and -e... " >&6; }
+if ${ac_cv_path_GREP+:} false; then :
+ $as_echo_n "(cached) " >&6
+else
+ if test -z "$GREP"; then
+ ac_path_GREP_found=false
+ # Loop through the user's path and test for each of PROGNAME-LIST
+ as_save_IFS=$IFS; IFS=$PATH_SEPARATOR
+for as_dir in $PATH$PATH_SEPARATOR/usr/xpg4/bin
+do
+ IFS=$as_save_IFS
+ test -z "$as_dir" && as_dir=.
+ for ac_prog in grep ggrep; do
+ for ac_exec_ext in '' $ac_executable_extensions; do
+ ac_path_GREP="$as_dir/$ac_prog$ac_exec_ext"
+ as_fn_executable_p "$ac_path_GREP" || continue
+# Check for GNU ac_path_GREP and select it if it is found.
+ # Check for GNU $ac_path_GREP
+case `"$ac_path_GREP" --version 2>&1` in
+*GNU*)
+ ac_cv_path_GREP="$ac_path_GREP" ac_path_GREP_found=:;;
+*)
+ ac_count=0
+ $as_echo_n 0123456789 >"conftest.in"
+ while :
+ do
+ cat "conftest.in" "conftest.in" >"conftest.tmp"
+ mv "conftest.tmp" "conftest.in"
+ cp "conftest.in" "conftest.nl"
+ $as_echo 'GREP' >> "conftest.nl"
+ "$ac_path_GREP" -e 'GREP$' -e '-(cannot match)-' < "conftest.nl" >"conftest.out" 2>/dev/null || break
+ diff "conftest.out" "conftest.nl" >/dev/null 2>&1 || break
+ as_fn_arith $ac_count + 1 && ac_count=$as_val
+ if test $ac_count -gt ${ac_path_GREP_max-0}; then
+ # Best one so far, save it but keep looking for a better one
+ ac_cv_path_GREP="$ac_path_GREP"
+ ac_path_GREP_max=$ac_count
+ fi
+ # 10*(2^10) chars as input seems more than enough
+ test $ac_count -gt 10 && break
+ done
+ rm -f conftest.in conftest.tmp conftest.nl conftest.out;;
+esac
+
+ $ac_path_GREP_found && break 3
+ done
+ done
+ done
+IFS=$as_save_IFS
+ if test -z "$ac_cv_path_GREP"; then
+ as_fn_error $? "no acceptable grep could be found in $PATH$PATH_SEPARATOR/usr/xpg4/bin" "$LINENO" 5
+ fi
+else
+ ac_cv_path_GREP=$GREP
+fi
+
+fi
+{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_path_GREP" >&5
+$as_echo "$ac_cv_path_GREP" >&6; }
+ GREP="$ac_cv_path_GREP"
+
+
+{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for egrep" >&5
+$as_echo_n "checking for egrep... " >&6; }
+if ${ac_cv_path_EGREP+:} false; then :
+ $as_echo_n "(cached) " >&6
+else
+ if echo a | $GREP -E '(a|b)' >/dev/null 2>&1
+ then ac_cv_path_EGREP="$GREP -E"
+ else
+ if test -z "$EGREP"; then
+ ac_path_EGREP_found=false
+ # Loop through the user's path and test for each of PROGNAME-LIST
+ as_save_IFS=$IFS; IFS=$PATH_SEPARATOR
+for as_dir in $PATH$PATH_SEPARATOR/usr/xpg4/bin
+do
+ IFS=$as_save_IFS
+ test -z "$as_dir" && as_dir=.
+ for ac_prog in egrep; do
+ for ac_exec_ext in '' $ac_executable_extensions; do
+ ac_path_EGREP="$as_dir/$ac_prog$ac_exec_ext"
+ as_fn_executable_p "$ac_path_EGREP" || continue
+# Check for GNU ac_path_EGREP and select it if it is found.
+ # Check for GNU $ac_path_EGREP
+case `"$ac_path_EGREP" --version 2>&1` in
+*GNU*)
+ ac_cv_path_EGREP="$ac_path_EGREP" ac_path_EGREP_found=:;;
+*)
+ ac_count=0
+ $as_echo_n 0123456789 >"conftest.in"
+ while :
+ do
+ cat "conftest.in" "conftest.in" >"conftest.tmp"
+ mv "conftest.tmp" "conftest.in"
+ cp "conftest.in" "conftest.nl"
+ $as_echo 'EGREP' >> "conftest.nl"
+ "$ac_path_EGREP" 'EGREP$' < "conftest.nl" >"conftest.out" 2>/dev/null || break
+ diff "conftest.out" "conftest.nl" >/dev/null 2>&1 || break
+ as_fn_arith $ac_count + 1 && ac_count=$as_val
+ if test $ac_count -gt ${ac_path_EGREP_max-0}; then
+ # Best one so far, save it but keep looking for a better one
+ ac_cv_path_EGREP="$ac_path_EGREP"
+ ac_path_EGREP_max=$ac_count
+ fi
+ # 10*(2^10) chars as input seems more than enough
+ test $ac_count -gt 10 && break
+ done
+ rm -f conftest.in conftest.tmp conftest.nl conftest.out;;
+esac
+
+ $ac_path_EGREP_found && break 3
+ done
+ done
+ done
+IFS=$as_save_IFS
+ if test -z "$ac_cv_path_EGREP"; then
+ as_fn_error $? "no acceptable egrep could be found in $PATH$PATH_SEPARATOR/usr/xpg4/bin" "$LINENO" 5
+ fi
+else
+ ac_cv_path_EGREP=$EGREP
+fi
+
+ fi
+fi
+{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_path_EGREP" >&5
+$as_echo "$ac_cv_path_EGREP" >&6; }
+ EGREP="$ac_cv_path_EGREP"
+
+
+{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for ANSI C header files" >&5
+$as_echo_n "checking for ANSI C header files... " >&6; }
+if ${ac_cv_header_stdc+:} false; then :
+ $as_echo_n "(cached) " >&6
+else
+ cat confdefs.h - <<_ACEOF >conftest.$ac_ext
+/* end confdefs.h. */
+#include <stdlib.h>
+#include <stdarg.h>
+#include <string.h>
+#include <float.h>
+
+int
+main ()
+{
+
+ ;
+ return 0;
+}
+_ACEOF
+if ac_fn_c_try_compile "$LINENO"; then :
+ ac_cv_header_stdc=yes
+else
+ ac_cv_header_stdc=no
+fi
+rm -f core conftest.err conftest.$ac_objext conftest.$ac_ext
+
+if test $ac_cv_header_stdc = yes; then
+ # SunOS 4.x string.h does not declare mem*, contrary to ANSI.
+ cat confdefs.h - <<_ACEOF >conftest.$ac_ext
+/* end confdefs.h. */
+#include <string.h>
+
+_ACEOF
+if (eval "$ac_cpp conftest.$ac_ext") 2>&5 |
+ $EGREP "memchr" >/dev/null 2>&1; then :
+
+else
+ ac_cv_header_stdc=no
+fi
+rm -f conftest*
+
+fi
+
+if test $ac_cv_header_stdc = yes; then
+ # ISC 2.0.2 stdlib.h does not declare free, contrary to ANSI.
+ cat confdefs.h - <<_ACEOF >conftest.$ac_ext
+/* end confdefs.h. */
+#include <stdlib.h>
+
+_ACEOF
+if (eval "$ac_cpp conftest.$ac_ext") 2>&5 |
+ $EGREP "free" >/dev/null 2>&1; then :
+
+else
+ ac_cv_header_stdc=no
+fi
+rm -f conftest*
+
+fi
+
+if test $ac_cv_header_stdc = yes; then
+ # /bin/cc in Irix-4.0.5 gets non-ANSI ctype macros unless using -ansi.
+ if test "$cross_compiling" = yes; then :
+ :
+else
+ cat confdefs.h - <<_ACEOF >conftest.$ac_ext
+/* end confdefs.h. */
+#include <ctype.h>
+#include <stdlib.h>
+#if ((' ' & 0x0FF) == 0x020)
+# define ISLOWER(c) ('a' <= (c) && (c) <= 'z')
+# define TOUPPER(c) (ISLOWER(c) ? 'A' + ((c) - 'a') : (c))
+#else
+# define ISLOWER(c) \
+ (('a' <= (c) && (c) <= 'i') \
+ || ('j' <= (c) && (c) <= 'r') \
+ || ('s' <= (c) && (c) <= 'z'))
+# define TOUPPER(c) (ISLOWER(c) ? ((c) | 0x40) : (c))
+#endif
+
+#define XOR(e, f) (((e) && !(f)) || (!(e) && (f)))
+int
+main ()
+{
+ int i;
+ for (i = 0; i < 256; i++)
+ if (XOR (islower (i), ISLOWER (i))
+ || toupper (i) != TOUPPER (i))
+ return 2;
+ return 0;
+}
+_ACEOF
+if ac_fn_c_try_run "$LINENO"; then :
+
+else
+ ac_cv_header_stdc=no
+fi
+rm -f core *.core core.conftest.* gmon.out bb.out conftest$ac_exeext \
+ conftest.$ac_objext conftest.beam conftest.$ac_ext
+fi
+
+fi
+fi
+{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_header_stdc" >&5
+$as_echo "$ac_cv_header_stdc" >&6; }
+if test $ac_cv_header_stdc = yes; then
+
+$as_echo "#define STDC_HEADERS 1" >>confdefs.h
+
+fi
+
+# On IRIX 5.3, sys/types and inttypes.h are conflicting.
+for ac_header in sys/types.h sys/stat.h stdlib.h string.h memory.h strings.h \
+ inttypes.h stdint.h unistd.h
+do :
+ as_ac_Header=`$as_echo "ac_cv_header_$ac_header" | $as_tr_sh`
+ac_fn_c_check_header_compile "$LINENO" "$ac_header" "$as_ac_Header" "$ac_includes_default
+"
+if eval test \"x\$"$as_ac_Header"\" = x"yes"; then :
+ cat >>confdefs.h <<_ACEOF
+#define `$as_echo "HAVE_$ac_header" | $as_tr_cpp` 1
+_ACEOF
+
+fi
+
+done
+
+
+ac_fn_c_check_header_mongrel "$LINENO" "Clp_C_Interface.h" "ac_cv_header_Clp_C_Interface_h" "$ac_includes_default"
+if test "x$ac_cv_header_Clp_C_Interface_h" = xyes; then :
+
+else
+ as_fn_error $? "Could not find Clp_C_Interface.h:
+ clpAPI requires clp from http://www.coin-or.org/projects/Clp.xml
+ use --with-clp-include or CLP_INCLUDE to specify the include path." "$LINENO" 5
+fi
+
+
+
+
+{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for library containing Clp_newModel" >&5
+$as_echo_n "checking for library containing Clp_newModel... " >&6; }
+if ${ac_cv_search_Clp_newModel+:} false; then :
+ $as_echo_n "(cached) " >&6
+else
+ ac_func_search_save_LIBS=$LIBS
+cat confdefs.h - <<_ACEOF >conftest.$ac_ext
+/* end confdefs.h. */
+
+/* Override any GCC internal prototype to avoid an error.
+ Use char because int might match the return type of a GCC
+ builtin and then its argument prototype would still apply. */
+#ifdef __cplusplus
+extern "C"
+#endif
+char Clp_newModel ();
+int
+main ()
+{
+return Clp_newModel ();
+ ;
+ return 0;
+}
+_ACEOF
+for ac_lib in '' Clp; do
+ if test -z "$ac_lib"; then
+ ac_res="none required"
+ else
+ ac_res=-l$ac_lib
+ LIBS="-l$ac_lib $ac_func_search_save_LIBS"
+ fi
+ if ac_fn_c_try_link "$LINENO"; then :
+ ac_cv_search_Clp_newModel=$ac_res
+fi
+rm -f core conftest.err conftest.$ac_objext \
+ conftest$ac_exeext
+ if ${ac_cv_search_Clp_newModel+:} false; then :
+ break
+fi
+done
+if ${ac_cv_search_Clp_newModel+:} false; then :
+
+else
+ ac_cv_search_Clp_newModel=no
+fi
+rm conftest.$ac_ext
+LIBS=$ac_func_search_save_LIBS
+fi
+{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_search_Clp_newModel" >&5
+$as_echo "$ac_cv_search_Clp_newModel" >&6; }
+ac_res=$ac_cv_search_Clp_newModel
+if test "$ac_res" != no; then :
+ test "$ac_res" = "none required" || LIBS="$ac_res $LIBS"
+
+else
+ as_fn_error $? "Could not link to clp:
+ use --with-clp-lib or CLP_LIB to specify the lib path." "$LINENO" 5
+fi
+
+
+
+
+
+
+
+ac_config_files="$ac_config_files src/Makevars"
+
+cat >confcache <<\_ACEOF
+# This file is a shell script that caches the results of configure
+# tests run on this system so they can be shared between configure
+# scripts and configure runs, see configure's option --config-cache.
+# It is not useful on other systems. If it contains results you don't
+# want to keep, you may remove or edit it.
+#
+# config.status only pays attention to the cache file if you give it
+# the --recheck option to rerun configure.
+#
+# `ac_cv_env_foo' variables (set or unset) will be overridden when
+# loading this file, other *unset* `ac_cv_foo' will be assigned the
+# following values.
+
+_ACEOF
+
+# The following way of writing the cache mishandles newlines in values,
+# but we know of no workaround that is simple, portable, and efficient.
+# So, we kill variables containing newlines.
+# Ultrix sh set writes to stderr and can't be redirected directly,
+# and sets the high bit in the cache file unless we assign to the vars.
+(
+ for ac_var in `(set) 2>&1 | sed -n 's/^\([a-zA-Z_][a-zA-Z0-9_]*\)=.*/\1/p'`; do
+ eval ac_val=\$$ac_var
+ case $ac_val in #(
+ *${as_nl}*)
+ case $ac_var in #(
+ *_cv_*) { $as_echo "$as_me:${as_lineno-$LINENO}: WARNING: cache variable $ac_var contains a newline" >&5
+$as_echo "$as_me: WARNING: cache variable $ac_var contains a newline" >&2;} ;;
+ esac
+ case $ac_var in #(
+ _ | IFS | as_nl) ;; #(
+ BASH_ARGV | BASH_SOURCE) eval $ac_var= ;; #(
+ *) { eval $ac_var=; unset $ac_var;} ;;
+ esac ;;
+ esac
+ done
+
+ (set) 2>&1 |
+ case $as_nl`(ac_space=' '; set) 2>&1` in #(
+ *${as_nl}ac_space=\ *)
+ # `set' does not quote correctly, so add quotes: double-quote
+ # substitution turns \\\\ into \\, and sed turns \\ into \.
+ sed -n \
+ "s/'/'\\\\''/g;
+ s/^\\([_$as_cr_alnum]*_cv_[_$as_cr_alnum]*\\)=\\(.*\\)/\\1='\\2'/p"
+ ;; #(
+ *)
+ # `set' quotes correctly as required by POSIX, so do not add quotes.
+ sed -n "/^[_$as_cr_alnum]*_cv_[_$as_cr_alnum]*=/p"
+ ;;
+ esac |
+ sort
+) |
+ sed '
+ /^ac_cv_env_/b end
+ t clear
+ :clear
+ s/^\([^=]*\)=\(.*[{}].*\)$/test "${\1+set}" = set || &/
+ t end
+ s/^\([^=]*\)=\(.*\)$/\1=${\1=\2}/
+ :end' >>confcache
+if diff "$cache_file" confcache >/dev/null 2>&1; then :; else
+ if test -w "$cache_file"; then
+ if test "x$cache_file" != "x/dev/null"; then
+ { $as_echo "$as_me:${as_lineno-$LINENO}: updating cache $cache_file" >&5
+$as_echo "$as_me: updating cache $cache_file" >&6;}
+ if test ! -f "$cache_file" || test -h "$cache_file"; then
+ cat confcache >"$cache_file"
+ else
+ case $cache_file in #(
+ */* | ?:*)
+ mv -f confcache "$cache_file"$$ &&
+ mv -f "$cache_file"$$ "$cache_file" ;; #(
+ *)
+ mv -f confcache "$cache_file" ;;
+ esac
+ fi
+ fi
+ else
+ { $as_echo "$as_me:${as_lineno-$LINENO}: not updating unwritable cache $cache_file" >&5
+$as_echo "$as_me: not updating unwritable cache $cache_file" >&6;}
+ fi
+fi
+rm -f confcache
+
+test "x$prefix" = xNONE && prefix=$ac_default_prefix
+# Let make expand exec_prefix.
+test "x$exec_prefix" = xNONE && exec_prefix='${prefix}'
+
+# Transform confdefs.h into DEFS.
+# Protect against shell expansion while executing Makefile rules.
+# Protect against Makefile macro expansion.
+#
+# If the first sed substitution is executed (which looks for macros that
+# take arguments), then branch to the quote section. Otherwise,
+# look for a macro that doesn't take arguments.
+ac_script='
+:mline
+/\\$/{
+ N
+ s,\\\n,,
+ b mline
+}
+t clear
+:clear
+s/^[ ]*#[ ]*define[ ][ ]*\([^ (][^ (]*([^)]*)\)[ ]*\(.*\)/-D\1=\2/g
+t quote
+s/^[ ]*#[ ]*define[ ][ ]*\([^ ][^ ]*\)[ ]*\(.*\)/-D\1=\2/g
+t quote
+b any
+:quote
+s/[ `~#$^&*(){}\\|;'\''"<>?]/\\&/g
+s/\[/\\&/g
+s/\]/\\&/g
+s/\$/$$/g
+H
+:any
+${
+ g
+ s/^\n//
+ s/\n/ /g
+ p
+}
+'
+DEFS=`sed -n "$ac_script" confdefs.h`
+
+
+ac_libobjs=
+ac_ltlibobjs=
+U=
+for ac_i in : $LIBOBJS; do test "x$ac_i" = x: && continue
+ # 1. Remove the extension, and $U if already installed.
+ ac_script='s/\$U\././;s/\.o$//;s/\.obj$//'
+ ac_i=`$as_echo "$ac_i" | sed "$ac_script"`
+ # 2. Prepend LIBOBJDIR. When used with automake>=1.10 LIBOBJDIR
+ # will be set to the directory where LIBOBJS objects are built.
+ as_fn_append ac_libobjs " \${LIBOBJDIR}$ac_i\$U.$ac_objext"
+ as_fn_append ac_ltlibobjs " \${LIBOBJDIR}$ac_i"'$U.lo'
+done
+LIBOBJS=$ac_libobjs
+
+LTLIBOBJS=$ac_ltlibobjs
+
+
+
+: "${CONFIG_STATUS=./config.status}"
+ac_write_fail=0
+ac_clean_files_save=$ac_clean_files
+ac_clean_files="$ac_clean_files $CONFIG_STATUS"
+{ $as_echo "$as_me:${as_lineno-$LINENO}: creating $CONFIG_STATUS" >&5
+$as_echo "$as_me: creating $CONFIG_STATUS" >&6;}
+as_write_fail=0
+cat >$CONFIG_STATUS <<_ASEOF || as_write_fail=1
+#! $SHELL
+# Generated by $as_me.
+# Run this file to recreate the current configuration.
+# Compiler output produced by configure, useful for debugging
+# configure, is in config.log if it exists.
+
+debug=false
+ac_cs_recheck=false
+ac_cs_silent=false
+
+SHELL=\${CONFIG_SHELL-$SHELL}
+export SHELL
+_ASEOF
+cat >>$CONFIG_STATUS <<\_ASEOF || as_write_fail=1
+## -------------------- ##
+## M4sh Initialization. ##
+## -------------------- ##
+
+# Be more Bourne compatible
+DUALCASE=1; export DUALCASE # for MKS sh
+if test -n "${ZSH_VERSION+set}" && (emulate sh) >/dev/null 2>&1; then :
+ emulate sh
+ NULLCMD=:
+ # Pre-4.2 versions of Zsh do word splitting on ${1+"$@"}, which
+ # is contrary to our usage. Disable this feature.
+ alias -g '${1+"$@"}'='"$@"'
+ setopt NO_GLOB_SUBST
+else
+ case `(set -o) 2>/dev/null` in #(
+ *posix*) :
+ set -o posix ;; #(
+ *) :
+ ;;
+esac
+fi
+
+
+as_nl='
+'
+export as_nl
+# Printing a long string crashes Solaris 7 /usr/bin/printf.
+as_echo='\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\'
+as_echo=$as_echo$as_echo$as_echo$as_echo$as_echo
+as_echo=$as_echo$as_echo$as_echo$as_echo$as_echo$as_echo
+# Prefer a ksh shell builtin over an external printf program on Solaris,
+# but without wasting forks for bash or zsh.
+if test -z "$BASH_VERSION$ZSH_VERSION" \
+ && (test "X`print -r -- $as_echo`" = "X$as_echo") 2>/dev/null; then
+ as_echo='print -r --'
+ as_echo_n='print -rn --'
+elif (test "X`printf %s $as_echo`" = "X$as_echo") 2>/dev/null; then
+ as_echo='printf %s\n'
+ as_echo_n='printf %s'
+else
+ if test "X`(/usr/ucb/echo -n -n $as_echo) 2>/dev/null`" = "X-n $as_echo"; then
+ as_echo_body='eval /usr/ucb/echo -n "$1$as_nl"'
+ as_echo_n='/usr/ucb/echo -n'
+ else
+ as_echo_body='eval expr "X$1" : "X\\(.*\\)"'
+ as_echo_n_body='eval
+ arg=$1;
+ case $arg in #(
+ *"$as_nl"*)
+ expr "X$arg" : "X\\(.*\\)$as_nl";
+ arg=`expr "X$arg" : ".*$as_nl\\(.*\\)"`;;
+ esac;
+ expr "X$arg" : "X\\(.*\\)" | tr -d "$as_nl"
+ '
+ export as_echo_n_body
+ as_echo_n='sh -c $as_echo_n_body as_echo'
+ fi
+ export as_echo_body
+ as_echo='sh -c $as_echo_body as_echo'
+fi
+
+# The user is always right.
+if test "${PATH_SEPARATOR+set}" != set; then
+ PATH_SEPARATOR=:
+ (PATH='/bin;/bin'; FPATH=$PATH; sh -c :) >/dev/null 2>&1 && {
+ (PATH='/bin:/bin'; FPATH=$PATH; sh -c :) >/dev/null 2>&1 ||
+ PATH_SEPARATOR=';'
+ }
+fi
+
+
+# IFS
+# We need space, tab and new line, in precisely that order. Quoting is
+# there to prevent editors from complaining about space-tab.
+# (If _AS_PATH_WALK were called with IFS unset, it would disable word
+# splitting by setting IFS to empty value.)
+IFS=" "" $as_nl"
+
+# Find who we are. Look in the path if we contain no directory separator.
+as_myself=
+case $0 in #((
+ *[\\/]* ) as_myself=$0 ;;
+ *) as_save_IFS=$IFS; IFS=$PATH_SEPARATOR
+for as_dir in $PATH
+do
+ IFS=$as_save_IFS
+ test -z "$as_dir" && as_dir=.
+ test -r "$as_dir/$0" && as_myself=$as_dir/$0 && break
+ done
+IFS=$as_save_IFS
+
+ ;;
+esac
+# We did not find ourselves, most probably we were run as `sh COMMAND'
+# in which case we are not to be found in the path.
+if test "x$as_myself" = x; then
+ as_myself=$0
+fi
+if test ! -f "$as_myself"; then
+ $as_echo "$as_myself: error: cannot find myself; rerun with an absolute file name" >&2
+ exit 1
+fi
+
+# Unset variables that we do not need and which cause bugs (e.g. in
+# pre-3.0 UWIN ksh). But do not cause bugs in bash 2.01; the "|| exit 1"
+# suppresses any "Segmentation fault" message there. '((' could
+# trigger a bug in pdksh 5.2.14.
+for as_var in BASH_ENV ENV MAIL MAILPATH
+do eval test x\${$as_var+set} = xset \
+ && ( (unset $as_var) || exit 1) >/dev/null 2>&1 && unset $as_var || :
+done
+PS1='$ '
+PS2='> '
+PS4='+ '
+
+# NLS nuisances.
+LC_ALL=C
+export LC_ALL
+LANGUAGE=C
+export LANGUAGE
+
+# CDPATH.
+(unset CDPATH) >/dev/null 2>&1 && unset CDPATH
+
+
+# as_fn_error STATUS ERROR [LINENO LOG_FD]
+# ----------------------------------------
+# Output "`basename $0`: error: ERROR" to stderr. If LINENO and LOG_FD are
+# provided, also output the error to LOG_FD, referencing LINENO. Then exit the
+# script with STATUS, using 1 if that was 0.
+as_fn_error ()
+{
+ as_status=$1; test $as_status -eq 0 && as_status=1
+ if test "$4"; then
+ as_lineno=${as_lineno-"$3"} as_lineno_stack=as_lineno_stack=$as_lineno_stack
+ $as_echo "$as_me:${as_lineno-$LINENO}: error: $2" >&$4
+ fi
+ $as_echo "$as_me: error: $2" >&2
+ as_fn_exit $as_status
+} # as_fn_error
+
+
+# as_fn_set_status STATUS
+# -----------------------
+# Set $? to STATUS, without forking.
+as_fn_set_status ()
+{
+ return $1
+} # as_fn_set_status
+
+# as_fn_exit STATUS
+# -----------------
+# Exit the shell with STATUS, even in a "trap 0" or "set -e" context.
+as_fn_exit ()
+{
+ set +e
+ as_fn_set_status $1
+ exit $1
+} # as_fn_exit
+
+# as_fn_unset VAR
+# ---------------
+# Portably unset VAR.
+as_fn_unset ()
+{
+ { eval $1=; unset $1;}
+}
+as_unset=as_fn_unset
+# as_fn_append VAR VALUE
+# ----------------------
+# Append the text in VALUE to the end of the definition contained in VAR. Take
+# advantage of any shell optimizations that allow amortized linear growth over
+# repeated appends, instead of the typical quadratic growth present in naive
+# implementations.
+if (eval "as_var=1; as_var+=2; test x\$as_var = x12") 2>/dev/null; then :
+ eval 'as_fn_append ()
+ {
+ eval $1+=\$2
+ }'
+else
+ as_fn_append ()
+ {
+ eval $1=\$$1\$2
+ }
+fi # as_fn_append
+
+# as_fn_arith ARG...
+# ------------------
+# Perform arithmetic evaluation on the ARGs, and store the result in the
+# global $as_val. Take advantage of shells that can avoid forks. The arguments
+# must be portable across $(()) and expr.
+if (eval "test \$(( 1 + 1 )) = 2") 2>/dev/null; then :
+ eval 'as_fn_arith ()
+ {
+ as_val=$(( $* ))
+ }'
+else
+ as_fn_arith ()
+ {
+ as_val=`expr "$@" || test $? -eq 1`
+ }
+fi # as_fn_arith
+
+
+if expr a : '\(a\)' >/dev/null 2>&1 &&
+ test "X`expr 00001 : '.*\(...\)'`" = X001; then
+ as_expr=expr
+else
+ as_expr=false
+fi
+
+if (basename -- /) >/dev/null 2>&1 && test "X`basename -- / 2>&1`" = "X/"; then
+ as_basename=basename
+else
+ as_basename=false
+fi
+
+if (as_dir=`dirname -- /` && test "X$as_dir" = X/) >/dev/null 2>&1; then
+ as_dirname=dirname
+else
+ as_dirname=false
+fi
+
+as_me=`$as_basename -- "$0" ||
+$as_expr X/"$0" : '.*/\([^/][^/]*\)/*$' \| \
+ X"$0" : 'X\(//\)$' \| \
+ X"$0" : 'X\(/\)' \| . 2>/dev/null ||
+$as_echo X/"$0" |
+ sed '/^.*\/\([^/][^/]*\)\/*$/{
+ s//\1/
+ q
+ }
+ /^X\/\(\/\/\)$/{
+ s//\1/
+ q
+ }
+ /^X\/\(\/\).*/{
+ s//\1/
+ q
+ }
+ s/.*/./; q'`
+
+# Avoid depending upon Character Ranges.
+as_cr_letters='abcdefghijklmnopqrstuvwxyz'
+as_cr_LETTERS='ABCDEFGHIJKLMNOPQRSTUVWXYZ'
+as_cr_Letters=$as_cr_letters$as_cr_LETTERS
+as_cr_digits='0123456789'
+as_cr_alnum=$as_cr_Letters$as_cr_digits
+
+ECHO_C= ECHO_N= ECHO_T=
+case `echo -n x` in #(((((
+-n*)
+ case `echo 'xy\c'` in
+ *c*) ECHO_T=' ';; # ECHO_T is single tab character.
+ xy) ECHO_C='\c';;
+ *) echo `echo ksh88 bug on AIX 6.1` > /dev/null
+ ECHO_T=' ';;
+ esac;;
+*)
+ ECHO_N='-n';;
+esac
+
+rm -f conf$$ conf$$.exe conf$$.file
+if test -d conf$$.dir; then
+ rm -f conf$$.dir/conf$$.file
+else
+ rm -f conf$$.dir
+ mkdir conf$$.dir 2>/dev/null
+fi
+if (echo >conf$$.file) 2>/dev/null; then
+ if ln -s conf$$.file conf$$ 2>/dev/null; then
+ as_ln_s='ln -s'
+ # ... but there are two gotchas:
+ # 1) On MSYS, both `ln -s file dir' and `ln file dir' fail.
+ # 2) DJGPP < 2.04 has no symlinks; `ln -s' creates a wrapper executable.
+ # In both cases, we have to default to `cp -pR'.
+ ln -s conf$$.file conf$$.dir 2>/dev/null && test ! -f conf$$.exe ||
+ as_ln_s='cp -pR'
+ elif ln conf$$.file conf$$ 2>/dev/null; then
+ as_ln_s=ln
+ else
+ as_ln_s='cp -pR'
+ fi
+else
+ as_ln_s='cp -pR'
+fi
+rm -f conf$$ conf$$.exe conf$$.dir/conf$$.file conf$$.file
+rmdir conf$$.dir 2>/dev/null
+
+
+# as_fn_mkdir_p
+# -------------
+# Create "$as_dir" as a directory, including parents if necessary.
+as_fn_mkdir_p ()
+{
+
+ case $as_dir in #(
+ -*) as_dir=./$as_dir;;
+ esac
+ test -d "$as_dir" || eval $as_mkdir_p || {
+ as_dirs=
+ while :; do
+ case $as_dir in #(
+ *\'*) as_qdir=`$as_echo "$as_dir" | sed "s/'/'\\\\\\\\''/g"`;; #'(
+ *) as_qdir=$as_dir;;
+ esac
+ as_dirs="'$as_qdir' $as_dirs"
+ as_dir=`$as_dirname -- "$as_dir" ||
+$as_expr X"$as_dir" : 'X\(.*[^/]\)//*[^/][^/]*/*$' \| \
+ X"$as_dir" : 'X\(//\)[^/]' \| \
+ X"$as_dir" : 'X\(//\)$' \| \
+ X"$as_dir" : 'X\(/\)' \| . 2>/dev/null ||
+$as_echo X"$as_dir" |
+ sed '/^X\(.*[^/]\)\/\/*[^/][^/]*\/*$/{
+ s//\1/
+ q
+ }
+ /^X\(\/\/\)[^/].*/{
+ s//\1/
+ q
+ }
+ /^X\(\/\/\)$/{
+ s//\1/
+ q
+ }
+ /^X\(\/\).*/{
+ s//\1/
+ q
+ }
+ s/.*/./; q'`
+ test -d "$as_dir" && break
+ done
+ test -z "$as_dirs" || eval "mkdir $as_dirs"
+ } || test -d "$as_dir" || as_fn_error $? "cannot create directory $as_dir"
+
+
+} # as_fn_mkdir_p
+if mkdir -p . 2>/dev/null; then
+ as_mkdir_p='mkdir -p "$as_dir"'
+else
+ test -d ./-p && rmdir ./-p
+ as_mkdir_p=false
+fi
+
+
+# as_fn_executable_p FILE
+# -----------------------
+# Test if FILE is an executable regular file.
+as_fn_executable_p ()
+{
+ test -f "$1" && test -x "$1"
+} # as_fn_executable_p
+as_test_x='test -x'
+as_executable_p=as_fn_executable_p
+
+# Sed expression to map a string onto a valid CPP name.
+as_tr_cpp="eval sed 'y%*$as_cr_letters%P$as_cr_LETTERS%;s%[^_$as_cr_alnum]%_%g'"
+
+# Sed expression to map a string onto a valid variable name.
+as_tr_sh="eval sed 'y%*+%pp%;s%[^_$as_cr_alnum]%_%g'"
+
+
+exec 6>&1
+## ----------------------------------- ##
+## Main body of $CONFIG_STATUS script. ##
+## ----------------------------------- ##
+_ASEOF
+test $as_write_fail = 0 && chmod +x $CONFIG_STATUS || ac_write_fail=1
+
+cat >>$CONFIG_STATUS <<\_ACEOF || ac_write_fail=1
+# Save the log message, to keep $0 and so on meaningful, and to
+# report actual input values of CONFIG_FILES etc. instead of their
+# values after options handling.
+ac_log="
+This file was extended by clpAPI $as_me 1.2.6, which was
+generated by GNU Autoconf 2.69. Invocation command line was
+
+ CONFIG_FILES = $CONFIG_FILES
+ CONFIG_HEADERS = $CONFIG_HEADERS
+ CONFIG_LINKS = $CONFIG_LINKS
+ CONFIG_COMMANDS = $CONFIG_COMMANDS
+ $ $0 $@
+
+on `(hostname || uname -n) 2>/dev/null | sed 1q`
+"
+
+_ACEOF
+
+case $ac_config_files in *"
+"*) set x $ac_config_files; shift; ac_config_files=$*;;
+esac
+
+
+
+cat >>$CONFIG_STATUS <<_ACEOF || ac_write_fail=1
+# Files that config.status was made for.
+config_files="$ac_config_files"
+
+_ACEOF
+
+cat >>$CONFIG_STATUS <<\_ACEOF || ac_write_fail=1
+ac_cs_usage="\
+\`$as_me' instantiates files and other configuration actions
+from templates according to the current configuration. Unless the files
+and actions are specified as TAGs, all are instantiated by default.
+
+Usage: $0 [OPTION]... [TAG]...
+
+ -h, --help print this help, then exit
+ -V, --version print version number and configuration settings, then exit
+ --config print configuration, then exit
+ -q, --quiet, --silent
+ do not print progress messages
+ -d, --debug don't remove temporary files
+ --recheck update $as_me by reconfiguring in the same conditions
+ --file=FILE[:TEMPLATE]
+ instantiate the configuration file FILE
+
+Configuration files:
+$config_files
+
+Report bugs to <geliudie@uni-duesseldorf.de>."
+
+_ACEOF
+cat >>$CONFIG_STATUS <<_ACEOF || ac_write_fail=1
+ac_cs_config="`$as_echo "$ac_configure_args" | sed 's/^ //; s/[\\""\`\$]/\\\\&/g'`"
+ac_cs_version="\\
+clpAPI config.status 1.2.6
+configured by $0, generated by GNU Autoconf 2.69,
+ with options \\"\$ac_cs_config\\"
+
+Copyright (C) 2012 Free Software Foundation, Inc.
+This config.status script is free software; the Free Software Foundation
+gives unlimited permission to copy, distribute and modify it."
+
+ac_pwd='$ac_pwd'
+srcdir='$srcdir'
+test -n "\$AWK" || AWK=awk
+_ACEOF
+
+cat >>$CONFIG_STATUS <<\_ACEOF || ac_write_fail=1
+# The default lists apply if the user does not specify any file.
+ac_need_defaults=:
+while test $# != 0
+do
+ case $1 in
+ --*=?*)
+ ac_option=`expr "X$1" : 'X\([^=]*\)='`
+ ac_optarg=`expr "X$1" : 'X[^=]*=\(.*\)'`
+ ac_shift=:
+ ;;
+ --*=)
+ ac_option=`expr "X$1" : 'X\([^=]*\)='`
+ ac_optarg=
+ ac_shift=:
+ ;;
+ *)
+ ac_option=$1
+ ac_optarg=$2
+ ac_shift=shift
+ ;;
+ esac
+
+ case $ac_option in
+ # Handling of the options.
+ -recheck | --recheck | --rechec | --reche | --rech | --rec | --re | --r)
+ ac_cs_recheck=: ;;
+ --version | --versio | --versi | --vers | --ver | --ve | --v | -V )
+ $as_echo "$ac_cs_version"; exit ;;
+ --config | --confi | --conf | --con | --co | --c )
+ $as_echo "$ac_cs_config"; exit ;;
+ --debug | --debu | --deb | --de | --d | -d )
+ debug=: ;;
+ --file | --fil | --fi | --f )
+ $ac_shift
+ case $ac_optarg in
+ *\'*) ac_optarg=`$as_echo "$ac_optarg" | sed "s/'/'\\\\\\\\''/g"` ;;
+ '') as_fn_error $? "missing file argument" ;;
+ esac
+ as_fn_append CONFIG_FILES " '$ac_optarg'"
+ ac_need_defaults=false;;
+ --he | --h | --help | --hel | -h )
+ $as_echo "$ac_cs_usage"; exit ;;
+ -q | -quiet | --quiet | --quie | --qui | --qu | --q \
+ | -silent | --silent | --silen | --sile | --sil | --si | --s)
+ ac_cs_silent=: ;;
+
+ # This is an error.
+ -*) as_fn_error $? "unrecognized option: \`$1'
+Try \`$0 --help' for more information." ;;
+
+ *) as_fn_append ac_config_targets " $1"
+ ac_need_defaults=false ;;
+
+ esac
+ shift
+done
+
+ac_configure_extra_args=
+
+if $ac_cs_silent; then
+ exec 6>/dev/null
+ ac_configure_extra_args="$ac_configure_extra_args --silent"
+fi
+
+_ACEOF
+cat >>$CONFIG_STATUS <<_ACEOF || ac_write_fail=1
+if \$ac_cs_recheck; then
+ set X $SHELL '$0' $ac_configure_args \$ac_configure_extra_args --no-create --no-recursion
+ shift
+ \$as_echo "running CONFIG_SHELL=$SHELL \$*" >&6
+ CONFIG_SHELL='$SHELL'
+ export CONFIG_SHELL
+ exec "\$@"
+fi
+
+_ACEOF
+cat >>$CONFIG_STATUS <<\_ACEOF || ac_write_fail=1
+exec 5>>config.log
+{
+ echo
+ sed 'h;s/./-/g;s/^.../## /;s/...$/ ##/;p;x;p;x' <<_ASBOX
+## Running $as_me. ##
+_ASBOX
+ $as_echo "$ac_log"
+} >&5
+
+_ACEOF
+cat >>$CONFIG_STATUS <<_ACEOF || ac_write_fail=1
+_ACEOF
+
+cat >>$CONFIG_STATUS <<\_ACEOF || ac_write_fail=1
+
+# Handling of arguments.
+for ac_config_target in $ac_config_targets
+do
+ case $ac_config_target in
+ "src/Makevars") CONFIG_FILES="$CONFIG_FILES src/Makevars" ;;
+
+ *) as_fn_error $? "invalid argument: \`$ac_config_target'" "$LINENO" 5;;
+ esac
+done
+
+
+# If the user did not use the arguments to specify the items to instantiate,
+# then the envvar interface is used. Set only those that are not.
+# We use the long form for the default assignment because of an extremely
+# bizarre bug on SunOS 4.1.3.
+if $ac_need_defaults; then
+ test "${CONFIG_FILES+set}" = set || CONFIG_FILES=$config_files
+fi
+
+# Have a temporary directory for convenience. Make it in the build tree
+# simply because there is no reason against having it here, and in addition,
+# creating and moving files from /tmp can sometimes cause problems.
+# Hook for its removal unless debugging.
+# Note that there is a small window in which the directory will not be cleaned:
+# after its creation but before its name has been assigned to `$tmp'.
+$debug ||
+{
+ tmp= ac_tmp=
+ trap 'exit_status=$?
+ : "${ac_tmp:=$tmp}"
+ { test ! -d "$ac_tmp" || rm -fr "$ac_tmp"; } && exit $exit_status
+' 0
+ trap 'as_fn_exit 1' 1 2 13 15
+}
+# Create a (secure) tmp directory for tmp files.
+
+{
+ tmp=`(umask 077 && mktemp -d "./confXXXXXX") 2>/dev/null` &&
+ test -d "$tmp"
+} ||
+{
+ tmp=./conf$$-$RANDOM
+ (umask 077 && mkdir "$tmp")
+} || as_fn_error $? "cannot create a temporary directory in ." "$LINENO" 5
+ac_tmp=$tmp
+
+# Set up the scripts for CONFIG_FILES section.
+# No need to generate them if there are no CONFIG_FILES.
+# This happens for instance with `./config.status config.h'.
+if test -n "$CONFIG_FILES"; then
+
+
+ac_cr=`echo X | tr X '\015'`
+# On cygwin, bash can eat \r inside `` if the user requested igncr.
+# But we know of no other shell where ac_cr would be empty at this
+# point, so we can use a bashism as a fallback.
+if test "x$ac_cr" = x; then
+ eval ac_cr=\$\'\\r\'
+fi
+ac_cs_awk_cr=`$AWK 'BEGIN { print "a\rb" }' </dev/null 2>/dev/null`
+if test "$ac_cs_awk_cr" = "a${ac_cr}b"; then
+ ac_cs_awk_cr='\\r'
+else
+ ac_cs_awk_cr=$ac_cr
+fi
+
+echo 'BEGIN {' >"$ac_tmp/subs1.awk" &&
+_ACEOF
+
+
+{
+ echo "cat >conf$$subs.awk <<_ACEOF" &&
+ echo "$ac_subst_vars" | sed 's/.*/&!$&$ac_delim/' &&
+ echo "_ACEOF"
+} >conf$$subs.sh ||
+ as_fn_error $? "could not make $CONFIG_STATUS" "$LINENO" 5
+ac_delim_num=`echo "$ac_subst_vars" | grep -c '^'`
+ac_delim='%!_!# '
+for ac_last_try in false false false false false :; do
+ . ./conf$$subs.sh ||
+ as_fn_error $? "could not make $CONFIG_STATUS" "$LINENO" 5
+
+ ac_delim_n=`sed -n "s/.*$ac_delim\$/X/p" conf$$subs.awk | grep -c X`
+ if test $ac_delim_n = $ac_delim_num; then
+ break
+ elif $ac_last_try; then
+ as_fn_error $? "could not make $CONFIG_STATUS" "$LINENO" 5
+ else
+ ac_delim="$ac_delim!$ac_delim _$ac_delim!! "
+ fi
+done
+rm -f conf$$subs.sh
+
+cat >>$CONFIG_STATUS <<_ACEOF || ac_write_fail=1
+cat >>"\$ac_tmp/subs1.awk" <<\\_ACAWK &&
+_ACEOF
+sed -n '
+h
+s/^/S["/; s/!.*/"]=/
+p
+g
+s/^[^!]*!//
+:repl
+t repl
+s/'"$ac_delim"'$//
+t delim
+:nl
+h
+s/\(.\{148\}\)..*/\1/
+t more1
+s/["\\]/\\&/g; s/^/"/; s/$/\\n"\\/
+p
+n
+b repl
+:more1
+s/["\\]/\\&/g; s/^/"/; s/$/"\\/
+p
+g
+s/.\{148\}//
+t nl
+:delim
+h
+s/\(.\{148\}\)..*/\1/
+t more2
+s/["\\]/\\&/g; s/^/"/; s/$/"/
+p
+b
+:more2
+s/["\\]/\\&/g; s/^/"/; s/$/"\\/
+p
+g
+s/.\{148\}//
+t delim
+' <conf$$subs.awk | sed '
+/^[^""]/{
+ N
+ s/\n//
+}
+' >>$CONFIG_STATUS || ac_write_fail=1
+rm -f conf$$subs.awk
+cat >>$CONFIG_STATUS <<_ACEOF || ac_write_fail=1
+_ACAWK
+cat >>"\$ac_tmp/subs1.awk" <<_ACAWK &&
+ for (key in S) S_is_set[key] = 1
+ FS = ""
+
+}
+{
+ line = $ 0
+ nfields = split(line, field, "@")
+ substed = 0
+ len = length(field[1])
+ for (i = 2; i < nfields; i++) {
+ key = field[i]
+ keylen = length(key)
+ if (S_is_set[key]) {
+ value = S[key]
+ line = substr(line, 1, len) "" value "" substr(line, len + keylen + 3)
+ len += length(value) + length(field[++i])
+ substed = 1
+ } else
+ len += 1 + keylen
+ }
+
+ print line
+}
+
+_ACAWK
+_ACEOF
+cat >>$CONFIG_STATUS <<\_ACEOF || ac_write_fail=1
+if sed "s/$ac_cr//" < /dev/null > /dev/null 2>&1; then
+ sed "s/$ac_cr\$//; s/$ac_cr/$ac_cs_awk_cr/g"
+else
+ cat
+fi < "$ac_tmp/subs1.awk" > "$ac_tmp/subs.awk" \
+ || as_fn_error $? "could not setup config files machinery" "$LINENO" 5
+_ACEOF
+
+# VPATH may cause trouble with some makes, so we remove sole $(srcdir),
+# ${srcdir} and @srcdir@ entries from VPATH if srcdir is ".", strip leading and
+# trailing colons and then remove the whole line if VPATH becomes empty
+# (actually we leave an empty line to preserve line numbers).
+if test "x$srcdir" = x.; then
+ ac_vpsub='/^[ ]*VPATH[ ]*=[ ]*/{
+h
+s///
+s/^/:/
+s/[ ]*$/:/
+s/:\$(srcdir):/:/g
+s/:\${srcdir}:/:/g
+s/:@srcdir@:/:/g
+s/^:*//
+s/:*$//
+x
+s/\(=[ ]*\).*/\1/
+G
+s/\n//
+s/^[^=]*=[ ]*$//
+}'
+fi
+
+cat >>$CONFIG_STATUS <<\_ACEOF || ac_write_fail=1
+fi # test -n "$CONFIG_FILES"
+
+
+eval set X " :F $CONFIG_FILES "
+shift
+for ac_tag
+do
+ case $ac_tag in
+ :[FHLC]) ac_mode=$ac_tag; continue;;
+ esac
+ case $ac_mode$ac_tag in
+ :[FHL]*:*);;
+ :L* | :C*:*) as_fn_error $? "invalid tag \`$ac_tag'" "$LINENO" 5;;
+ :[FH]-) ac_tag=-:-;;
+ :[FH]*) ac_tag=$ac_tag:$ac_tag.in;;
+ esac
+ ac_save_IFS=$IFS
+ IFS=:
+ set x $ac_tag
+ IFS=$ac_save_IFS
+ shift
+ ac_file=$1
+ shift
+
+ case $ac_mode in
+ :L) ac_source=$1;;
+ :[FH])
+ ac_file_inputs=
+ for ac_f
+ do
+ case $ac_f in
+ -) ac_f="$ac_tmp/stdin";;
+ *) # Look for the file first in the build tree, then in the source tree
+ # (if the path is not absolute). The absolute path cannot be DOS-style,
+ # because $ac_f cannot contain `:'.
+ test -f "$ac_f" ||
+ case $ac_f in
+ [\\/$]*) false;;
+ *) test -f "$srcdir/$ac_f" && ac_f="$srcdir/$ac_f";;
+ esac ||
+ as_fn_error 1 "cannot find input file: \`$ac_f'" "$LINENO" 5;;
+ esac
+ case $ac_f in *\'*) ac_f=`$as_echo "$ac_f" | sed "s/'/'\\\\\\\\''/g"`;; esac
+ as_fn_append ac_file_inputs " '$ac_f'"
+ done
+
+ # Let's still pretend it is `configure' which instantiates (i.e., don't
+ # use $as_me), people would be surprised to read:
+ # /* config.h. Generated by config.status. */
+ configure_input='Generated from '`
+ $as_echo "$*" | sed 's|^[^:]*/||;s|:[^:]*/|, |g'
+ `' by configure.'
+ if test x"$ac_file" != x-; then
+ configure_input="$ac_file. $configure_input"
+ { $as_echo "$as_me:${as_lineno-$LINENO}: creating $ac_file" >&5
+$as_echo "$as_me: creating $ac_file" >&6;}
+ fi
+ # Neutralize special characters interpreted by sed in replacement strings.
+ case $configure_input in #(
+ *\&* | *\|* | *\\* )
+ ac_sed_conf_input=`$as_echo "$configure_input" |
+ sed 's/[\\\\&|]/\\\\&/g'`;; #(
+ *) ac_sed_conf_input=$configure_input;;
+ esac
+
+ case $ac_tag in
+ *:-:* | *:-) cat >"$ac_tmp/stdin" \
+ || as_fn_error $? "could not create $ac_file" "$LINENO" 5 ;;
+ esac
+ ;;
+ esac
+
+ ac_dir=`$as_dirname -- "$ac_file" ||
+$as_expr X"$ac_file" : 'X\(.*[^/]\)//*[^/][^/]*/*$' \| \
+ X"$ac_file" : 'X\(//\)[^/]' \| \
+ X"$ac_file" : 'X\(//\)$' \| \
+ X"$ac_file" : 'X\(/\)' \| . 2>/dev/null ||
+$as_echo X"$ac_file" |
+ sed '/^X\(.*[^/]\)\/\/*[^/][^/]*\/*$/{
+ s//\1/
+ q
+ }
+ /^X\(\/\/\)[^/].*/{
+ s//\1/
+ q
+ }
+ /^X\(\/\/\)$/{
+ s//\1/
+ q
+ }
+ /^X\(\/\).*/{
+ s//\1/
+ q
+ }
+ s/.*/./; q'`
+ as_dir="$ac_dir"; as_fn_mkdir_p
+ ac_builddir=.
+
+case "$ac_dir" in
+.) ac_dir_suffix= ac_top_builddir_sub=. ac_top_build_prefix= ;;
+*)
+ ac_dir_suffix=/`$as_echo "$ac_dir" | sed 's|^\.[\\/]||'`
+ # A ".." for each directory in $ac_dir_suffix.
+ ac_top_builddir_sub=`$as_echo "$ac_dir_suffix" | sed 's|/[^\\/]*|/..|g;s|/||'`
+ case $ac_top_builddir_sub in
+ "") ac_top_builddir_sub=. ac_top_build_prefix= ;;
+ *) ac_top_build_prefix=$ac_top_builddir_sub/ ;;
+ esac ;;
+esac
+ac_abs_top_builddir=$ac_pwd
+ac_abs_builddir=$ac_pwd$ac_dir_suffix
+# for backward compatibility:
+ac_top_builddir=$ac_top_build_prefix
+
+case $srcdir in
+ .) # We are building in place.
+ ac_srcdir=.
+ ac_top_srcdir=$ac_top_builddir_sub
+ ac_abs_top_srcdir=$ac_pwd ;;
+ [\\/]* | ?:[\\/]* ) # Absolute name.
+ ac_srcdir=$srcdir$ac_dir_suffix;
+ ac_top_srcdir=$srcdir
+ ac_abs_top_srcdir=$srcdir ;;
+ *) # Relative name.
+ ac_srcdir=$ac_top_build_prefix$srcdir$ac_dir_suffix
+ ac_top_srcdir=$ac_top_build_prefix$srcdir
+ ac_abs_top_srcdir=$ac_pwd/$srcdir ;;
+esac
+ac_abs_srcdir=$ac_abs_top_srcdir$ac_dir_suffix
+
+
+ case $ac_mode in
+ :F)
+ #
+ # CONFIG_FILE
+ #
+
+_ACEOF
+
+cat >>$CONFIG_STATUS <<\_ACEOF || ac_write_fail=1
+# If the template does not know about datarootdir, expand it.
+# FIXME: This hack should be removed a few years after 2.60.
+ac_datarootdir_hack=; ac_datarootdir_seen=
+ac_sed_dataroot='
+/datarootdir/ {
+ p
+ q
+}
+/@datadir@/p
+/@docdir@/p
+/@infodir@/p
+/@localedir@/p
+/@mandir@/p'
+case `eval "sed -n \"\$ac_sed_dataroot\" $ac_file_inputs"` in
+*datarootdir*) ac_datarootdir_seen=yes;;
+*@datadir@*|*@docdir@*|*@infodir@*|*@localedir@*|*@mandir@*)
+ { $as_echo "$as_me:${as_lineno-$LINENO}: WARNING: $ac_file_inputs seems to ignore the --datarootdir setting" >&5
+$as_echo "$as_me: WARNING: $ac_file_inputs seems to ignore the --datarootdir setting" >&2;}
+_ACEOF
+cat >>$CONFIG_STATUS <<_ACEOF || ac_write_fail=1
+ ac_datarootdir_hack='
+ s&@datadir@&$datadir&g
+ s&@docdir@&$docdir&g
+ s&@infodir@&$infodir&g
+ s&@localedir@&$localedir&g
+ s&@mandir@&$mandir&g
+ s&\\\${datarootdir}&$datarootdir&g' ;;
+esac
+_ACEOF
+
+# Neutralize VPATH when `$srcdir' = `.'.
+# Shell code in configure.ac might set extrasub.
+# FIXME: do we really want to maintain this feature?
+cat >>$CONFIG_STATUS <<_ACEOF || ac_write_fail=1
+ac_sed_extra="$ac_vpsub
+$extrasub
+_ACEOF
+cat >>$CONFIG_STATUS <<\_ACEOF || ac_write_fail=1
+:t
+/@[a-zA-Z_][a-zA-Z_0-9]*@/!b
+s|@configure_input@|$ac_sed_conf_input|;t t
+s&@top_builddir@&$ac_top_builddir_sub&;t t
+s&@top_build_prefix@&$ac_top_build_prefix&;t t
+s&@srcdir@&$ac_srcdir&;t t
+s&@abs_srcdir@&$ac_abs_srcdir&;t t
+s&@top_srcdir@&$ac_top_srcdir&;t t
+s&@abs_top_srcdir@&$ac_abs_top_srcdir&;t t
+s&@builddir@&$ac_builddir&;t t
+s&@abs_builddir@&$ac_abs_builddir&;t t
+s&@abs_top_builddir@&$ac_abs_top_builddir&;t t
+$ac_datarootdir_hack
+"
+eval sed \"\$ac_sed_extra\" "$ac_file_inputs" | $AWK -f "$ac_tmp/subs.awk" \
+ >$ac_tmp/out || as_fn_error $? "could not create $ac_file" "$LINENO" 5
+
+test -z "$ac_datarootdir_hack$ac_datarootdir_seen" &&
+ { ac_out=`sed -n '/\${datarootdir}/p' "$ac_tmp/out"`; test -n "$ac_out"; } &&
+ { ac_out=`sed -n '/^[ ]*datarootdir[ ]*:*=/p' \
+ "$ac_tmp/out"`; test -z "$ac_out"; } &&
+ { $as_echo "$as_me:${as_lineno-$LINENO}: WARNING: $ac_file contains a reference to the variable \`datarootdir'
+which seems to be undefined. Please make sure it is defined" >&5
+$as_echo "$as_me: WARNING: $ac_file contains a reference to the variable \`datarootdir'
+which seems to be undefined. Please make sure it is defined" >&2;}
+
+ rm -f "$ac_tmp/stdin"
+ case $ac_file in
+ -) cat "$ac_tmp/out" && rm -f "$ac_tmp/out";;
+ *) rm -f "$ac_file" && mv "$ac_tmp/out" "$ac_file";;
+ esac \
+ || as_fn_error $? "could not create $ac_file" "$LINENO" 5
+ ;;
+
+
+
+ esac
+
+done # for ac_tag
+
+
+as_fn_exit 0
+_ACEOF
+ac_clean_files=$ac_clean_files_save
+
+test $ac_write_fail = 0 ||
+ as_fn_error $? "write failure creating $CONFIG_STATUS" "$LINENO" 5
+
+
+# configure is writing to config.log, and then calls config.status.
+# config.status does its own redirection, appending to config.log.
+# Unfortunately, on DOS this fails, as config.log is still kept open
+# by configure, so config.status won't be able to write to it; its
+# output is simply discarded. So we exec the FD to /dev/null,
+# effectively closing config.log, so it can be properly (re)opened and
+# appended to by config.status. When coming back to configure, we
+# need to make the FD available again.
+if test "$no_create" != yes; then
+ ac_cs_success=:
+ ac_config_status_args=
+ test "$silent" = yes &&
+ ac_config_status_args="$ac_config_status_args --quiet"
+ exec 5>/dev/null
+ $SHELL $CONFIG_STATUS $ac_config_status_args || ac_cs_success=false
+ exec 5>>config.log
+ # Use ||, not &&, to avoid exiting from the if with $? = 1, which
+ # would make configure fail if this is the last instruction.
+ $ac_cs_success || as_fn_exit 1
+fi
+if test -n "$ac_unrecognized_opts" && test "$enable_option_checking" != no; then
+ { $as_echo "$as_me:${as_lineno-$LINENO}: WARNING: unrecognized options: $ac_unrecognized_opts" >&5
+$as_echo "$as_me: WARNING: unrecognized options: $ac_unrecognized_opts" >&2;}
+fi
+
+
+exit 0
diff --git a/configure.ac b/configure.ac
new file mode 100644
index 0000000000000000000000000000000000000000..a7b1946f99467d526606a6cb3dbf18e01e7ce8b4
--- /dev/null
+++ b/configure.ac
@@ -0,0 +1,259 @@
+AC_INIT([clpAPI], [1.2.6], [geliudie@uni-duesseldorf.de])
+
+dnl # --------------------------------------------------------------------
+dnl # global (environment) variables
+dnl # --------------------------------------------------------------------
+dnl
+dnl # PKG_CPPFLAGS C preprocessor flags -I...
+dnl # PKG_CFLAGS C compiler flags
+dnl # PKG_LIBS libraries -l...
+
+
+dnl # --------------------------------------------------------------------
+dnl # R compiler and flags
+dnl # --------------------------------------------------------------------
+
+: ${R_HOME=`R RHOME`}
+if test -z "${R_HOME}"; then
+ echo "could not determine R_HOME"
+ exit 1
+fi
+
+dnl # GNU R default settings
+CC=`"${R_HOME}/bin/R" CMD config CC`
+CPP=`"${R_HOME}/bin/R" CMD config CPP`
+CFLAGS=`"${R_HOME}/bin/R" CMD config CFLAGS`
+CPPFLAGS=`"${R_HOME}/bin/R" CMD config CPPFLAGS`
+AC_PROG_CC
+AC_PROG_CPP
+
+
+dnl # --------------------------------------------------------------------
+dnl # test for global variables
+dnl # --------------------------------------------------------------------
+
+ARGS_OK="FALSE"
+
+if test [ -n "$PKG_CPPFLAGS" -a -n "$PKG_LIBS" ] ; then
+ ARGS_OK="TRUE"
+else
+ if test [ -n "$PKG_CPPFLAGS" -o -n "$PKG_LIBS" ] ; then
+ AC_MSG_ERROR([Please set both variables: PKG_CPPFLAGS AND PKG_LIBS])
+ fi
+fi
+
+
+dnl # --------------------------------------------------------------------
+dnl # get arguments
+dnl # --------------------------------------------------------------------
+
+AC_ARG_WITH(clp-include,
+ AC_HELP_STRING([--with-clp-include=PATH],
+ [location of COIN-OR Clp include directory [[/usr/local/include]]]
+ ),
+ [CLP_INCLUDE=$withval],
+ [CLP_INCLUDE=""])
+
+AC_ARG_WITH(clp-lib,
+ AC_HELP_STRING([--with-clp-lib=PATH],
+ [location of COIN-OR Clp callable library [[usr/local/lib]]]
+ ),
+ [CLP_LIB=$withval],
+ [CLP_LIB=""])
+
+
+dnl # --------------------------------------------------------------------
+dnl # pkg-config
+dnl # --------------------------------------------------------------------
+
+dnl # include and library directories
+if test [ "$ARGS_OK" = "FALSE" ] ; then
+ AC_PATH_PROG([PKG_CONFIG], [pkg-config], [], [$PATH:/usr/local/bin])
+
+ if test [ "${PKG_CONFIG}" != "" ] ; then
+ if "${PKG_CONFIG}" --exists clp; then
+
+ CLP_LIBS=`${PKG_CONFIG} --libs clp`
+ CLP_CFLAGS=`${PKG_CONFIG} --cflags clp`
+
+ if test [ -z "$CLP_LIBS" -a -z "$CLP_CFLAGS" ] ; then
+ AC_MSG_NOTICE([can not get information about clp from pkg-config])
+ else
+ AC_MSG_NOTICE([set compile and link flags according to pkg-config])
+ AC_MSG_NOTICE([compile flags are $CLP_CFLAGS])
+ AC_MSG_NOTICE([link flags are $CLP_LIBS])
+ PKG_LIBS="${CLP_LIBS}"
+ PKG_CPPFLAGS="${CLP_CFLAGS}"
+ ARGS_OK="TRUE"
+ fi
+ else
+ AC_MSG_NOTICE([pkg-config file for clp is not available])
+ fi
+ fi
+fi
+
+
+dnl # --------------------------------------------------------------------
+dnl # test arguments
+dnl # --------------------------------------------------------------------
+
+dnl # include and library directories
+
+dnl # include and library directories
+if test [ "$ARGS_OK" = "FALSE" ] ; then
+
+ if test [ -n "$CLP_INCLUDE" -a -n "$CLP_LIB" ] ; then
+
+ if test [ -d "$CLP_INCLUDE" ] ; then
+ if test [ -d "$CLP_INCLUDE/coin" ] ; then
+ PKG_CPPFLAGS="-I${CLP_INCLUDE} -I${CLP_INCLUDE}/coin"
+ else
+ PKG_CPPFLAGS="-I${CLP_INCLUDE}"
+ fi
+ else
+ AC_MSG_ERROR([directory $CLP_INCLUDE does not exist])
+ fi
+
+ if test [ -d "$CLP_LIB" ] ; then
+ if test [ -d "$CLP_LIB/coin" ] ; then
+ PKG_LIBS="-L${CLP_LIB} -L${CLP_LIB}/coin"
+ else
+ PKG_LIBS="-L${CLP_LIB}"
+ fi
+ else
+ AC_MSG_ERROR([directory $CLP_LIB does not exist])
+ fi
+
+ else
+
+ dnl # if no arguments are given, try to find the clp executable. If is not
+ dnl # found, use /usr/local
+
+ AC_PREFIX_PROGRAM(clp)
+
+ if test [ "$prefix" = "NONE" ] ; then
+
+ AC_MSG_NOTICE([No prefix given, trying /usr and /usr/local])
+
+ if test [ -d "/usr/include" -o -d "/usr/local/include" ] ; then
+ PKG_CPPFLAGS="-I/usr/include -I/usr/local/include -I/usr/include/coin -I/usr/local/include/coin"
+ else
+ AC_MSG_ERROR([directories /usr/include and /usr/local/include do not exist])
+ fi
+
+ if test [ -d "/usr/local/lib" -o -d "/usr/local/lib64" -o -d "/usr/lib" -o -d "/usr/lib64"] ; then
+ PKG_LIBS=""
+ if test [ -d "/usr/local/lib" ] ; then
+ PKG_LIBS="$PKG_LIBS -L/usr/local/lib"
+ if test [ -d "/usr/local/lib/coin" ] ; then
+ PKG_LIBS="$PKG_LIBS -L/usr/local/lib/coin"
+ fi
+ fi
+ if test [ -d "/usr/local/lib64" ] ; then
+ PKG_LIBS="$PKG_LIBS -L/usr/local/lib64"
+ if test [ -d "/usr/local/lib64/coin" ] ; then
+ PKG_LIBS="$PKG_LIBS -L/usr/local/lib64/coin"
+ fi
+ fi
+ if test [ -d "/usr/lib" ] ; then
+ PKG_LIBS="$PKG_LIBS -L/usr/lib"
+ if test [ -d "/usr/lib/coin" ] ; then
+ PKG_LIBS="$PKG_LIBS -L/usr/lib/coin"
+ fi
+ fi
+ if test [ -d "/usr/lib64" ] ; then
+ PKG_LIBS="$PKG_LIBS -L/usr/lib64"
+ if test [ -d "/usr/lib64/coin" ] ; then
+ PKG_LIBS="$PKG_LIBS -L/usr/lib64/coin"
+ fi
+ fi
+ # PKG_LIBS="-L/usr/local/lib -Wl,-rpath /usr/local/lib"
+ else
+ AC_MSG_ERROR([none of the directories /usr/local/lib, /usr/local/lib64, /usr/lib of /usr/lib64 exists])
+ fi
+
+ else
+
+ AC_MSG_NOTICE([found executable clp in $prefix])
+
+ if test [ -d "$prefix/include" ] ; then
+ PKG_CPPFLAGS="-I$prefix/include"
+ if test [ -d "$prefix/include/coin" ] ; then
+ PKG_CPPFLAGS="$PKG_CPPFLAGS -I$prefix/include/coin"
+ fi
+ else
+ AC_MSG_ERROR([directory $prefix/include does not exist])
+ fi
+
+ if test [ -d "$prefix/lib" -o -d "$prefix/lib64" ] ; then
+ PKG_LIBS=""
+ if test [ -d "$prefix/lib" ] ; then
+ PKG_LIBS="$PKG_LIBS -L$prefix/lib"
+ if test [ -d "$prefix/lib/coin" ] ; then
+ PKG_LIBS="$PKG_LIBS -L$prefix/lib/coin"
+ fi
+ fi
+ if test [ -d "$prefix/lib64" ] ; then
+ PKG_LIBS="$PKG_LIBS -L$prefix/lib64"
+ if test [ -d "$prefix/lib64/coin" ] ; then
+ PKG_LIBS="$PKG_LIBS -L$prefix/lib64/coin"
+ fi
+ fi
+ else
+ AC_MSG_ERROR([neither $prefix/lib nor $prefix/lib64 exist])
+ fi
+
+ fi
+
+ fi
+
+ PKG_LIBS="${PKG_LIBS} -lClp -lCoinUtils -lm"
+
+ ARGS_OK="TRUE"
+fi
+
+
+dnl # --------------------------------------------------------------------
+dnl # CFLAGS
+dnl # --------------------------------------------------------------------
+
+if test [ -z "$PKG_CFLAGS" ] ; then
+ if test [ "${R_ARCH}" = "/x86_64" ] ; then
+ PKG_CFLAGS="-m64"
+ elif test [ "${R_ARCH}" = "/i386" ] ; then
+ PKG_CFLAGS="-m32"
+ else
+ PKG_CFLAGS=""
+ fi
+fi
+
+
+dnl # --------------------------------------------------------------------
+dnl # check header and library
+dnl # --------------------------------------------------------------------
+
+LIBS="${PKG_LIBS}"
+CFLAGS="${CFLAGS} ${PKG_CFLAGS}"
+CPPFLAGS="${CPPFLAGS} ${PKG_CPPFLAGS}"
+
+AC_CHECK_HEADER([Clp_C_Interface.h],,
+ AC_MSG_ERROR([Could not find Clp_C_Interface.h:
+ clpAPI requires clp from http://www.coin-or.org/projects/Clp.xml
+ use --with-clp-include or CLP_INCLUDE to specify the include path.]))
+
+
+AC_SEARCH_LIBS([Clp_newModel], [Clp], ,
+ AC_MSG_ERROR([Could not link to clp:
+ use --with-clp-lib or CLP_LIB to specify the lib path.]))
+
+
+dnl # --------------------------------------------------------------------
+dnl # substitute src/Makevars
+dnl # --------------------------------------------------------------------
+
+AC_SUBST(PKG_CFLAGS)
+AC_SUBST(PKG_LIBS)
+AC_SUBST(PKG_CPPFLAGS)
+AC_OUTPUT(src/Makevars)
+
+exit 0
diff --git a/configure.win b/configure.win
new file mode 100644
index 0000000000000000000000000000000000000000..e69de29bb2d1d6434b8b29ae775ad8c2e48c5391
diff --git a/inst/INSTALL b/inst/INSTALL
new file mode 100644
index 0000000000000000000000000000000000000000..ec725f88f0adc0244236db11f822d316d09e256e
--- /dev/null
+++ b/inst/INSTALL
@@ -0,0 +1,66 @@
+GNU R package clpAPI: R Interface to C API of COIN-OR Clp
+
+
+The installation procedure for the clpAPI package needs to know where to
+find the COIN-OR Clp include directory and where to find the callable library.
+
+
+# ---------------------------------------------------------------------------- #
+# Linux and MacOS X installation
+# ---------------------------------------------------------------------------- #
+
+There are basically four different ways of installing the clpAPI package:
+
+1) Use --with-clp-<ARG>
+
+ --with-clp-include=PATH with PATH being the include directory of
+ COIN-OR Clp
+
+ --with-clp-lib=PATH with PATH being the directory containing the
+ callable library.
+
+ R CMD INSTALL --configure-args=" \
+ --with-clp-include=/path/to/include/dir \
+ --with-clp-lib=/path/to/lib/dir" clpAPI_X.X.X.tar.gz
+
+
+ When using --with-clp-<ARG>, both arguments must be given.
+
+2) Use of environment variables
+
+ PKG_CPPFLAGS giving the PATH to the include directory of
+ COIN-OR Clp
+ PKG_LIBS giving the PATH to the directory containing the
+ callable library.
+
+3) Use --prefix
+
+ --prefix=PATH with path being the installation directory of
+ COIN-OR Clp. The include directory is assumed to
+ be PATH/include and the callable library should
+ be in PATH/lib.
+
+ If either --with-clp-<ARG> nor --prefix is given, it is checked wether
+ clp is in the PATH. If yes, PATH is used as prefix. If not,
+ /usr/local/include and /usr/local/lib are tested.
+
+3) Use pkg-config
+
+ If pkg-config is available on your system, the pkg-config information
+ of COIN-OR Clp will be used.
+
+
+# ---------------------------------------------------------------------------- #
+# Windows installation
+# ---------------------------------------------------------------------------- #
+
+For the installation on Windows systems the file Makewars.win in src/ is
+required. The file looks like this:
+
+PKG_CPPFLAGS=-g -D_R_=1 -DUSE_R=1 -I${CLP_PATH}/include/coin
+PKG_LIBS=-L${CLP_PATH}/lib/coin -lClp -lCoinUtils -lstdc++
+
+with the environment variable CLP_PATH being the installation directory
+of COIN-OR Clp. This procedure was tested successfully on 32-bit Windows XP.
+
+
diff --git a/inst/NEWS.Rd b/inst/NEWS.Rd
new file mode 100644
index 0000000000000000000000000000000000000000..59d6fe5f16120ba33cac2e3feee0e236f8e4d855
--- /dev/null
+++ b/inst/NEWS.Rd
@@ -0,0 +1,180 @@
+%% clpAPI Version History
+
+\name{NEWS}
+\title{clpAPI News}
+\encoding{UTF-8}
+
+
+% ---------------------------------------------------------------------------- %
+\section{Changes in version 1.2.6 2013-10-26}{
+ \itemize{
+ \item a minor bugfix in file \file{configure.ac}
+ }
+}
+
+
+% ---------------------------------------------------------------------------- %
+\section{Changes in version 1.2.5 2013-09-08}{
+ \itemize{
+ \item removed argument \code{--enable-lapack} from file \file{configure.ac}
+ }
+}
+
+
+% ---------------------------------------------------------------------------- %
+\section{Changes in version 1.2.4 2013-07-17}{
+ \itemize{
+ \item added function \code{probNameCLP()}
+ }
+}
+
+
+% ---------------------------------------------------------------------------- %
+\section{Changes in version 1.2.3 2013-05-23}{
+ \itemize{
+ \item prints the version number of COIN-OR Clp on startup
+ \item added functions \code{dropNamesCLP()}, \code{copyNamesCLP()} and
+ \code{lengthNamesCLP()}
+ }
+}
+
+
+% ---------------------------------------------------------------------------- %
+\section{Changes in version 1.2.2 2013-01-16}{
+ \itemize{
+ \item removed old file \file{NEWS.Rd} from top level directory
+ }
+}
+
+
+% ---------------------------------------------------------------------------- %
+\section{Changes in version 1.2.1 2012-04-21}{
+ \itemize{
+ \item bugfix in file \file{configure.ac} when using pkg-config
+ }
+}
+
+
+% ---------------------------------------------------------------------------- %
+\section{Changes in version 1.2.0 2012-04-20}{
+ \itemize{
+ \item updated \file{configure.ac} script
+
+ \item file \file{NEWS} is now in \file{inst/NEWS.Rd}
+
+ \item added finalizer for COIN-OR Clp problem objects
+
+ \item Function \code{initProbCLP()} returns an instances of class
+ \code{clpPtr}. This class has two data slots:
+ \tabular{ll}{
+ clpPtrType \tab a character string giving the pointer type and \cr
+ clpPointer \tab a pointer to a C structure \cr
+ }
+
+ \item file \file{c2r.map} in \file{inst/}: mapping of filenames between
+ C API and \pkg{clpAPI}, run
+ \preformatted{
+c2r <- system.file(package = "clpAPI", "c2r.map")
+source(c2r)
+ }
+ in order to use original function names of the COIN-OR Clp C API.
+ }
+}
+
+
+% ---------------------------------------------------------------------------- %
+\section{Changes in version 1.1.7 2011-08-22}{
+ \itemize{
+ \item minor update in \file{configure.ac}
+ }
+}
+
+
+% ---------------------------------------------------------------------------- %
+\section{Changes in version 1.1.6 2011-07-29}{
+ \itemize{
+ \item \file{configure.ac} script and \file{Makevars.win} are now compatible
+ to COIN-OR Clp version 1.14.0
+ }
+}
+
+
+
+% ---------------------------------------------------------------------------- %
+\section{Changes in version 1.1.5 2011-07-28}{
+ \itemize{
+ \item added \file{NAMESPACE}
+ }
+}
+
+
+% ---------------------------------------------------------------------------- %
+\section{Changes in version 1.1.4 2011-07-27}{
+ \itemize{
+ \item removed file \file{COPYING}
+ }
+}
+
+
+% ---------------------------------------------------------------------------- %
+\section{Changes in version 1.1.3 2011-07-27}{
+ \itemize{
+ \item changes in \file{configure.ac}
+ \item updated package vignette
+ \item added files \file{INSTALL} and \file{README}
+ }
+}
+
+
+% ---------------------------------------------------------------------------- %
+\section{Changes in version 1.1.2 2011-07-14}{
+ \itemize{
+ \item minor changes in \file{configure.ac}
+ }
+}
+
+
+% ---------------------------------------------------------------------------- %
+\section{Changes in version 1.1.1 2011-07-12}{
+ \itemize{
+ \item renamed to \pkg{clpAPI}
+ }
+}
+
+
+% ---------------------------------------------------------------------------- %
+\section{Changes in version 1.0.3 2011-05-12}{
+ \itemize{
+ \item added functions \code{getColDualCLP()}, \code{getRowPrimCLP()} and
+ \code{getRowDualCLP()}
+ }
+}
+
+
+% ---------------------------------------------------------------------------- %
+\section{Changes in version 1.0.2 2010-12-15}{
+ \itemize{
+ \item fixed a bug in \file{configure.ac}
+ }
+}
+
+
+% ---------------------------------------------------------------------------- %
+\section{Changes in version 1.0.1 2010-11-05}{
+ \itemize{
+
+
+ \item added functions \code{addRowsCLP()}, \code{addColsCLP()},
+ \code{deleteRowsCLP()} and \code{deleteColsCLP()}
+ }
+}
+
+
+% ---------------------------------------------------------------------------- %
+\section{Changes in version 1.0.0 2010-08-19}{
+ \itemize{
+ \item initial public release
+ }
+}
+
+
diff --git a/inst/README b/inst/README
new file mode 100644
index 0000000000000000000000000000000000000000..7ee9c6635cce030573260378e08bb1cdefc1b826
--- /dev/null
+++ b/inst/README
@@ -0,0 +1,4 @@
+GNU R package clpAPI: R Interface to C API of COIN-OR Clp
+
+The package clpAPI requires a working installation of COIN-OR Clp (including
+libraries and header files).
diff --git a/inst/c2r.map b/inst/c2r.map
new file mode 100644
index 0000000000000000000000000000000000000000..86f0e3f2c0dad7393efab38c87f90c47eda7dcc3
--- /dev/null
+++ b/inst/c2r.map
@@ -0,0 +1,61 @@
+#------------------------------------------------------------------------------#
+# map COIN-OR Clp function names to clpAPI function names #
+#------------------------------------------------------------------------------#
+
+# COIN-OR Clp # clpAPI
+
+Clp_addColumns <- clpAPI::addColsCLP
+Clp_addRows <- clpAPI::addRowsCLP
+Clp_chgColumnLower <- clpAPI::chgColLowerCLP
+Clp_chgColumnUpper <- clpAPI::chgColUpperCLP
+Clp_chgObjCoefficients <- clpAPI::chgObjCoefsCLP
+Clp_chgRowLower <- clpAPI::chgRowLowerCLP
+Clp_chgRowUpper <- clpAPI::chgRowUpperCLP
+#Clp_columnName <- clpAPI::colNameCLP
+Clp_copyNames <- clpAPI::copyNamesCLP
+Clp_deleteColumns <- clpAPI::delColsCLP
+Clp_deleteModel <- clpAPI::delProbCLP
+Clp_deleteRows <- clpAPI::delRowsCLP
+Clp_dropNames <- clpAPI::dropNamesCLP
+Clp_dual <- clpAPI::dualCLP
+Clp_dualColumnSolution <- clpAPI::getColDualCLP
+Clp_columnLower <- clpAPI::getColLowerCLP
+Clp_primalColumnSolution <- clpAPI::getColPrimCLP
+Clp_columnUpper <- clpAPI::getColUpperCLP
+Clp_getIndices <- clpAPI::getIndCLP
+Clp_logLevel <- clpAPI::getLogLevelCLP
+Clp_getElements <- clpAPI::getNnzCLP
+Clp_numberColumns <- clpAPI::getNumColsCLP
+Clp_getNumElements <- clpAPI::getNumNnzCLP
+Clp_numberRows <- clpAPI::getNumRowsCLP
+Clp_objective <- clpAPI::getObjCoefsCLP
+Clp_optimizationDirection <- clpAPI::getObjDirCLP
+Clp_objectiveValue <- clpAPI::getObjValCLP
+Clp_dualRowSolution <- clpAPI::getRowDualCLP
+Clp_rowLower <- clpAPI::getRowLowerCLP
+Clp_primalRowSolution <- clpAPI::getRowPrimCLP
+Clp_problemName <- clpAPI::probNameCLP
+Clp_rowUpper <- clpAPI::getRowUpperCLP
+Clp_scalingFlag <- clpAPI::getScaleFlagCLP
+Clp_status <- clpAPI::getSolStatusCLP
+Clp_getVectorLengths <- clpAPI::getVecLenCLP
+Clp_getVectorStarts <- clpAPI::getVecStartCLP
+Clp_idiot <- clpAPI::idiotCLP
+Clp_newModel <- clpAPI::initProbCLP
+Clp_lengthNames <- clpAPI::lengthNamesCLP
+Clp_loadProblem <- clpAPI::loadProblemCLP
+Clp_primal <- clpAPI::primalCLP
+Clp_printModel <- clpAPI::printModelCLP
+Clp_readMps <- clpAPI::readMPSCLP
+Clp_resize <- clpAPI::resizeCLP
+Clp_restoreModel <- clpAPI::restoreModelCLP
+#Clp_rowName <- clpAPI::rowNameCLP
+Clp_saveModel <- clpAPI::saveModelCLP
+Clp_scaling <- clpAPI::scaleModelCLP
+Clp_setLogLevel <- clpAPI::setLogLevelCLP
+Clp_setOptimizationDirection <- clpAPI::setObjDirCLP
+Clp_initialBarrierSolve <- clpAPI::solveInitialBarrierCLP
+Clp_initialBarrierNoCrossSolve <- clpAPI::solveInitialBarrierNoCrossCLP
+Clp_initialSolve <- clpAPI::solveInitialCLP
+Clp_initialDualSolve <- clpAPI::solveInitialDualCLP
+Clp_initialPrimalSolve <- clpAPI::solveInitialPrimalCLP
diff --git a/inst/doc/clpAPI.R b/inst/doc/clpAPI.R
new file mode 100644
index 0000000000000000000000000000000000000000..3dac6b3aa4eb2ce0a25bb2b2c21fd198e7d287cf
--- /dev/null
+++ b/inst/doc/clpAPI.R
@@ -0,0 +1,127 @@
+### R code from vignette source 'clpAPI.Rnw'
+### Encoding: UTF-8
+
+###################################################
+### code chunk number 1: clpAPI.Rnw:74-75
+###################################################
+library(clpAPI)
+
+
+###################################################
+### code chunk number 2: clpAPI.Rnw:78-79
+###################################################
+prob <- initProbCLP()
+
+
+###################################################
+### code chunk number 3: clpAPI.Rnw:82-83
+###################################################
+setObjDirCLP(prob, -1)
+
+
+###################################################
+### code chunk number 4: clpAPI.Rnw:86-88
+###################################################
+nc <- 3
+nr <- 3
+
+
+###################################################
+### code chunk number 5: clpAPI.Rnw:92-93
+###################################################
+ia <- c(0, 1, 2, 0, 1, 2, 0, 1, 2)
+
+
+###################################################
+### code chunk number 6: clpAPI.Rnw:96-97
+###################################################
+ja <- c(0, 3, 6, 9)
+
+
+###################################################
+### code chunk number 7: clpAPI.Rnw:100-101
+###################################################
+ar <- c(2, 4, 3, 3, 1, 4, 1, 2, 2)
+
+
+###################################################
+### code chunk number 8: clpAPI.Rnw:104-105
+###################################################
+clb <- rep(0, 3)
+
+
+###################################################
+### code chunk number 9: clpAPI.Rnw:108-109
+###################################################
+rub <- c(5, 11, 8)
+
+
+###################################################
+### code chunk number 10: clpAPI.Rnw:112-113
+###################################################
+obj <- c(5, 4, 3)
+
+
+###################################################
+### code chunk number 11: clpAPI.Rnw:116-117
+###################################################
+loadProblemCLP(prob, nc, nr, ia, ja, ar, clb, NULL, obj, NULL, rub)
+
+
+###################################################
+### code chunk number 12: clpAPI.Rnw:120-121
+###################################################
+solveInitialCLP(prob)
+
+
+###################################################
+### code chunk number 13: clpAPI.Rnw:124-125
+###################################################
+getObjValCLP(prob)
+
+
+###################################################
+### code chunk number 14: clpAPI.Rnw:129-130
+###################################################
+getColPrimCLP(prob)
+
+
+###################################################
+### code chunk number 15: clpAPI.Rnw:134-135
+###################################################
+getColDualCLP(prob)
+
+
+###################################################
+### code chunk number 16: clpAPI.Rnw:138-139
+###################################################
+delProbCLP(prob)
+
+
+###################################################
+### code chunk number 17: clpAPI.Rnw:154-155
+###################################################
+help("Clp_addColumns")
+
+
+###################################################
+### code chunk number 18: clpAPI.Rnw:165-167
+###################################################
+c2r <- system.file(package = "clpAPI", "c2r.map")
+source(c2r)
+
+
+###################################################
+### code chunk number 19: clpAPI.Rnw:170-172
+###################################################
+pr1 <- initProbCLP()
+delProbCLP(pr1)
+
+
+###################################################
+### code chunk number 20: clpAPI.Rnw:175-177
+###################################################
+pr2 <- Clp_newModel()
+Clp_deleteModel(pr2)
+
+
diff --git a/inst/doc/clpAPI.Rnw b/inst/doc/clpAPI.Rnw
new file mode 100644
index 0000000000000000000000000000000000000000..c1bf50b28847f3bc53b47e394ed157ac367438ca
--- /dev/null
+++ b/inst/doc/clpAPI.Rnw
@@ -0,0 +1,183 @@
+\documentclass[a4paper,headings=small]{scrartcl}
+\usepackage[english]{babel}
+\usepackage[T1]{fontenc}
+\usepackage[latin1]{inputenc}
+\usepackage{textcomp,lmodern}
+\typearea[current]{last}
+\usepackage{fixltx2e,mparhack,mathdots}
+
+\usepackage{natbib}
+\usepackage{hyperref}
+\bibliographystyle{abbrvnat}
+
+\usepackage{microtype}
+
+
+\newcommand{\Comp}[1]{\texttt{#1}}
+
+\addtolength{\skip\footins}{0.5\baselineskip}
+
+\usepackage{fnpos}
+
+
+\hypersetup{
+ pdftitle = {clpAPI -- Quick Start},
+ pdfauthor = {Gabriel Gelius-Dietrich},
+ pdfsubject = {R Interface to C API of COIN-OR Clp},
+ pdfkeywords = {Optimization, COIN-OR Clp},
+ pdfborder = {0 0 0},
+ pdfhighlight = {/N}
+}
+
+
+\newcommand{\pkg}[1]{\emph{#1}}
+\newcommand{\pkgname}{\pkg{clpAPI}}
+\newcommand{\prgname}[1]{\textsc{#1}}
+
+
+\begin{document}
+\title{clpAPI -- Quick Start}
+%\VignetteIndexEntry{Package clpAPI -- Quick Start}
+\author{Gabriel Gelius-Dietrich}
+
+\maketitle
+
+\section{Introduction}
+The package \pkgname{} provides a low level interface to the C~API of
+COIN-OR Clp\footnote{COIN-OR linear programming version 1.12.0 or higher
+\url{https://projects.coin-or.org/Clp}} (COIN-OR linear programming).
+The package \pkgname{} relies on a separate installation of COIN-OR Clp.
+
+\section{Installation}
+See \Comp{INSTALL} for installation instructions and platform specific details.
+
+\section{Usage}
+
+In the following, an example lp-problem will be created and solved:
+
+\noindent
+\hspace{.5in} maximize
+$$z = 5 x_1 + 4 x_2 + 3 x_3$$
+\hspace{.5in} subject to
+$$
+\begin{array}{r@{\:}c@{\:}r@{\:}c@{\:}r@{\:}c@{\:}r}
+2 x_1 &+& 3 x_2 &+& x_3 & \leq 5 \\
+4 x_1 &+& x_2 &+& 2 x_3 & \leq 11 \\
+3 x_1 &+& 4 x_2 &+& 2 x_3 & \leq 8 \\
+\end{array}
+$$
+\hspace{.5in} where all variables are non-negative
+$$x_1 \geq 0, \ x_2 \geq 0, \ x_3 \geq 0$$
+
+\noindent
+Load the library.
+<<>>=
+library(clpAPI)
+@
+Create a problem object.
+<<>>=
+prob <- initProbCLP()
+@
+Set the direction of optimization ($-1$: maximize, $1$: minimize).
+<<>>=
+setObjDirCLP(prob, -1)
+@
+Prepare data structures for the problem object. Number of columns and rows:
+<<>>=
+nc <- 3
+nr <- 3
+@
+The constraint matrix is passed in column major order format. \textbf{Be
+careful here:} all indices start with 0! Row indices.
+<<>>=
+ia <- c(0, 1, 2, 0, 1, 2, 0, 1, 2)
+@
+Column indices.
+<<>>=
+ja <- c(0, 3, 6, 9)
+@
+Non-zero elements.
+<<>>=
+ar <- c(2, 4, 3, 3, 1, 4, 1, 2, 2)
+@
+Lower bounds for the variables (columns).
+<<>>=
+clb <- rep(0, 3)
+@
+Right hand side (row upper bounds for the rows).
+<<>>=
+rub <- c(5, 11, 8)
+@
+Objective coefficients.
+<<>>=
+obj <- c(5, 4, 3)
+@
+Load problem data into the problem object.
+<<>>=
+loadProblemCLP(prob, nc, nr, ia, ja, ar, clb, NULL, obj, NULL, rub)
+@
+Solve the problem using the simplex algorithm.
+<<>>=
+solveInitialCLP(prob)
+@
+Retrieve the value of the objective function after optimization.
+<<>>=
+getObjValCLP(prob)
+@
+Retrieve the primal values of the structural variables (columns) after
+optimization.
+<<>>=
+getColPrimCLP(prob)
+@
+Retrieve the dual values of the structural variables (columns) after
+optimization (reduced costs).
+<<>>=
+getColDualCLP(prob)
+@
+Free memory, allacated to the problem object.
+<<>>=
+delProbCLP(prob)
+@
+
+
+\section{Function names}
+
+\subsection{Searching}
+
+The function names in \pkgname{} are different from the names in
+\prgname{COIN-OR Clp},
+e.\,g. the function \texttt{addColsCLP} in \pkgname{} is called
+\texttt{Clp\_addColumns} in \prgname{COIN-OR Clp}. The directory \texttt{inst/}
+containes a file \texttt{c2r.map} which maps a \prgname{COIN-OR Clp} function
+name to the corresponding \pkgname{} function name. Additionally, all man-pages
+contain an alias to the \prgname{COIN-OR Clp} function name. The call
+<<>>=
+help("Clp_addColumns")
+@
+will bring up the man-page of \texttt{addColsCLP}.
+
+
+\subsection{Mapping}
+
+The file \texttt{c2r.map} in \texttt{inst/} maps the \pkgname{} function names
+to the orininal \prgname{COIN-OR Clp} function names of its C-API.
+To use the latter, run
+<<>>=
+c2r <- system.file(package = "clpAPI", "c2r.map")
+source(c2r)
+@
+now either
+<<>>=
+pr1 <- initProbCLP()
+delProbCLP(pr1)
+@
+or the original functions
+<<>>=
+pr2 <- Clp_newModel()
+Clp_deleteModel(pr2)
+@
+work both. Keep in mind that the mapping only affects the function names not the
+arguments of a function.
+
+
+\end{document}
diff --git a/man/addColsCLP.Rd b/man/addColsCLP.Rd
new file mode 100644
index 0000000000000000000000000000000000000000..5335e5d8a808c6fc441f6dcc3e2394734ad29469
--- /dev/null
+++ b/man/addColsCLP.Rd
@@ -0,0 +1,71 @@
+\name{addColsCLP}
+\alias{addColsCLP}
+\alias{Clp_addColumns}
+
+\title{
+ Add Columns
+}
+
+\description{
+ Low level interface function to the COIN-OR Clp function
+ \code{Clp_addColumns}. Consult the COIN-OR Clp documentation
+ for more detailed information.
+}
+
+\usage{
+ addColsCLP(lp, ncols, lb, ub, obj, colst, rows, val)
+}
+
+\arguments{
+ \item{lp}{
+ An object of class \code{"\linkS4class{clpPtr}"} as returned by
+ \code{\link{initProbCLP}}. This is basically a pointer to a COIN-OR Clp
+ problem object.
+ }
+ \item{ncols}{
+ Number of columns to add.
+ }
+ \item{lb}{
+ Lower bounds of the new columns.
+ }
+ \item{ub}{
+ Upper bounds of the new columns.
+ }
+ \item{obj}{
+ Objective coeficients of the new columns.
+ }
+ \item{colst}{
+ Vector containing the starting indices of new rows (Arguments \code{rows}
+ and \code{val} must be in column major order). The first element of
+ \code{colst} must be \code{0}, the last element must be
+ \code{length(val)+1}.
+ }
+ \item{rows}{
+ Row indices of the non zero elements in the new columns.
+ }
+ \item{val}{
+ Numerical values of the new non zero elements.
+ }
+}
+
+\details{
+ Interface to the C function \code{addRows} which calls
+ the COIN-OR Clp function \code{Clp_addRows}.
+}
+
+\value{
+ NULL
+}
+
+\references{
+ The COIN-OR Clp home page at
+ \url{http://www.coin-or.org/projects/Clp.xml}
+}
+
+\author{
+ Gabriel Gelius-Dietrich
+
+ Maintainer: Gabriel Gelius-Dietrich <geliudie@uni-duesseldorf.de>
+}
+
+\keyword{ optimize }
diff --git a/man/addRowsCLP.Rd b/man/addRowsCLP.Rd
new file mode 100644
index 0000000000000000000000000000000000000000..9e29fea229bdc4010ff9e49575e7b47e03bd00f6
--- /dev/null
+++ b/man/addRowsCLP.Rd
@@ -0,0 +1,68 @@
+\name{addRowsCLP}
+\alias{addRowsCLP}
+\alias{Clp_addRows}
+
+\title{
+ Add Rows
+}
+
+\description{
+ Low level interface function to the COIN-OR Clp function
+ \code{Clp_addRows}. Consult the COIN-OR Clp documentation
+ for more detailed information.
+}
+
+\usage{
+ addRowsCLP(lp, nrows, lb, ub, rowst, cols, val)
+}
+
+\arguments{
+ \item{lp}{
+ An object of class \code{"\linkS4class{clpPtr}"} as returned by
+ \code{\link{initProbCLP}}. This is basically a pointer to a COIN-OR Clp
+ problem object.
+ }
+ \item{nrows}{
+ Number of rows to add.
+ }
+ \item{lb}{
+ Lower bounds of the new rows.
+ }
+ \item{ub}{
+ Upper bounds of the new rows.
+ }
+ \item{rowst}{
+ Vector containing the starting indices of new rows (Arguments \code{cols}
+ and \code{val} must be in row major order). The first element of
+ \code{rowst} must be \code{0}, the last element must be
+ \code{length(val)+1}.
+ }
+ \item{cols}{
+ Column indices of the non zero elements in the new rows.
+ }
+ \item{val}{
+ Numerical values of the new non zero elements.
+ }
+}
+
+\details{
+ Interface to the C function \code{addRows} which calls
+ the COIN-OR Clp function \code{Clp_addRows}.
+}
+
+\value{
+ NULL
+}
+
+\references{
+ The COIN-OR Clp home page at
+ \url{http://www.coin-or.org/projects/Clp.xml}
+}
+
+\author{
+ Gabriel Gelius-Dietrich
+
+ Maintainer: Gabriel Gelius-Dietrich <geliudie@uni-duesseldorf.de>
+}
+
+\keyword{ optimize }
diff --git a/man/chgColLowerCLP.Rd b/man/chgColLowerCLP.Rd
new file mode 100644
index 0000000000000000000000000000000000000000..980f8504d90fe1268dba80b51f023d3512bbe9e0
--- /dev/null
+++ b/man/chgColLowerCLP.Rd
@@ -0,0 +1,52 @@
+\name{chgColLowerCLP}
+\alias{chgColLowerCLP}
+\alias{Clp_chgColumnLower}
+
+\title{
+ Set/Change Column Lower Bounds
+}
+
+\description{
+ Low level interface function to the COIN-OR Clp function
+ \code{Clp_chgColumnLower}. Consult the COIN-OR Clp documentation
+ for more detailed information.
+}
+
+\usage{
+ chgColLowerCLP(lp, lb)
+}
+
+\arguments{
+ \item{lp}{
+ An object of class \code{"\linkS4class{clpPtr}"} as returned by
+ \code{\link{initProbCLP}}. This is basically a pointer to a COIN-OR Clp
+ problem object.
+ }
+ \item{lb}{
+ Numeric vector containing the lower bounds of the
+ columns of the model.
+ }
+}
+
+\details{
+ Interface to the C function \code{chgColLower} which calls
+ the COIN-OR Clp function \code{Clp_chgColumnLower}.
+}
+
+\value{
+ NULL
+}
+
+\references{
+ The COIN-OR Clp home page at
+ \url{http://www.coin-or.org/projects/Clp.xml}
+}
+
+\author{
+ Gabriel Gelius-Dietrich
+
+ Maintainer: Gabriel Gelius-Dietrich <geliudie@uni-duesseldorf.de>
+}
+
+\keyword{ optimize }
+
diff --git a/man/chgColUpperCLP.Rd b/man/chgColUpperCLP.Rd
new file mode 100644
index 0000000000000000000000000000000000000000..26dd4d5fa5875b3f693fc401c94f6440248b72e5
--- /dev/null
+++ b/man/chgColUpperCLP.Rd
@@ -0,0 +1,52 @@
+\name{chgColUpperCLP}
+\alias{chgColUpperCLP}
+\alias{Clp_chgColumnUpper}
+
+\title{
+ Set/Change Column Upper Bounds
+}
+
+\description{
+ Low level interface function to the COIN-OR Clp function
+ \code{Clp_chgColumnUpper}. Consult the COIN-OR Clp documentation
+ for more detailed information.
+}
+
+\usage{
+ chgColUpperCLP(lp, ub)
+}
+
+\arguments{
+ \item{lp}{
+ An object of class \code{"\linkS4class{clpPtr}"} as returned by
+ \code{\link{initProbCLP}}. This is basically a pointer to a COIN-OR Clp
+ problem object.
+ }
+ \item{ub}{
+ Numeric vector containing the upper bounds of the
+ columns of the model.
+ }
+}
+
+\details{
+ Interface to the C function \code{chgColUpper} which calls
+ the COIN-OR Clp function \code{Clp_chgColumnUpper}.
+}
+
+\value{
+ NULL
+}
+
+\references{
+ The COIN-OR Clp home page at
+ \url{http://www.coin-or.org/projects/Clp.xml}
+}
+
+\author{
+ Gabriel Gelius-Dietrich
+
+ Maintainer: Gabriel Gelius-Dietrich <geliudie@uni-duesseldorf.de>
+}
+
+\keyword{ optimize }
+
diff --git a/man/chgObjCoefsCLP.Rd b/man/chgObjCoefsCLP.Rd
new file mode 100644
index 0000000000000000000000000000000000000000..b5233880108101940f896e8f2484daef270a7386
--- /dev/null
+++ b/man/chgObjCoefsCLP.Rd
@@ -0,0 +1,52 @@
+\name{chgObjCoefsCLP}
+\alias{chgObjCoefsCLP}
+\alias{Clp_chgObjCoefficients}
+
+\title{
+ Set/Change Objective Coefficients
+}
+
+\description{
+ Low level interface function to the COIN-OR Clp function
+ \code{Clp_chgObjCoefficients}. Consult the COIN-OR Clp
+ documentation for more detailed information.
+}
+
+\usage{
+ chgObjCoefsCLP(lp, objCoef)
+}
+
+\arguments{
+ \item{lp}{
+ An object of class \code{"\linkS4class{clpPtr}"} as returned by
+ \code{\link{initProbCLP}}. This is basically a pointer to a COIN-OR Clp
+ problem object.
+ }
+ \item{objCoef}{
+ Numeric vector containing the objective coefficients
+ of the model.
+ }
+}
+
+\details{
+ Interface to the C function \code{chgObjCoefs} which calls
+ the COIN-OR Clp function \code{Clp_chgObjCoefficients}.
+}
+
+\value{
+ NULL
+}
+
+\references{
+ The COIN-OR Clp home page at
+ \url{http://www.coin-or.org/projects/Clp.xml}
+}
+
+\author{
+ Gabriel Gelius-Dietrich
+
+ Maintainer: Gabriel Gelius-Dietrich <geliudie@uni-duesseldorf.de>
+}
+
+\keyword{ optimize }
+
diff --git a/man/chgRowLowerCLP.Rd b/man/chgRowLowerCLP.Rd
new file mode 100644
index 0000000000000000000000000000000000000000..fe8b81cf91bd538236dee6b0599324557784222b
--- /dev/null
+++ b/man/chgRowLowerCLP.Rd
@@ -0,0 +1,52 @@
+\name{chgRowLowerCLP}
+\alias{chgRowLowerCLP}
+\alias{Clp_chgRowLower}
+
+\title{
+ Set/Change Row Lower Bounds
+}
+
+\description{
+ Low level interface function to the COIN-OR Clp function
+ \code{Clp_chgRowLower}. Consult the COIN-OR Clp documentation
+ for more detailed information.
+}
+
+\usage{
+ chgRowLowerCLP(lp, rlb)
+}
+
+\arguments{
+ \item{lp}{
+ An object of class \code{"\linkS4class{clpPtr}"} as returned by
+ \code{\link{initProbCLP}}. This is basically a pointer to a COIN-OR Clp
+ problem object.
+ }
+ \item{rlb}{
+ Numeric vector containing the lower bounds of the
+ rows of the model.
+ }
+}
+
+\details{
+ Interface to the C function \code{chgColLower} which calls
+ the COIN-OR Clp function \code{Clp_chgRowLower}.
+}
+
+\value{
+ NULL
+}
+
+\references{
+ The COIN-OR Clp home page at
+ \url{http://www.coin-or.org/projects/Clp.xml}
+}
+
+\author{
+ Gabriel Gelius-Dietrich
+
+ Maintainer: Gabriel Gelius-Dietrich <geliudie@uni-duesseldorf.de>
+}
+
+\keyword{ optimize }
+
diff --git a/man/chgRowUpperCLP.Rd b/man/chgRowUpperCLP.Rd
new file mode 100644
index 0000000000000000000000000000000000000000..7ced423db98e6040674efe862628a334b20b7fd2
--- /dev/null
+++ b/man/chgRowUpperCLP.Rd
@@ -0,0 +1,52 @@
+\name{chgRowUpperCLP}
+\alias{chgRowUpperCLP}
+\alias{Clp_chgRowUpper}
+
+\title{
+ Set/Change Row Upper Bounds
+}
+
+\description{
+ Low level interface function to the COIN-OR Clp function
+ \code{Clp_chgRowUpper}. Consult the COIN-OR Clp documentation
+ for more detailed information.
+}
+
+\usage{
+chgRowUpperCLP(lp, rub)
+}
+
+\arguments{
+ \item{lp}{
+ An object of class \code{"\linkS4class{clpPtr}"} as returned by
+ \code{\link{initProbCLP}}. This is basically a pointer to a COIN-OR Clp
+ problem object.
+ }
+ \item{rub}{
+ Numeric vector containing the upper bounds of the
+ rows of the model.
+ }
+}
+
+\details{
+ Interface to the C function \code{chgRowUpper} which calls
+ the COIN-OR Clp function \code{Clp_chgRowUpper}.
+}
+
+\value{
+ NULL
+}
+
+\references{
+ The COIN-OR Clp home page at
+ \url{http://www.coin-or.org/projects/Clp.xml}
+}
+
+\author{
+ Gabriel Gelius-Dietrich
+
+ Maintainer: Gabriel Gelius-Dietrich <geliudie@uni-duesseldorf.de>
+}
+
+\keyword{ optimize }
+
diff --git a/man/clpAPI-package.Rd b/man/clpAPI-package.Rd
new file mode 100644
index 0000000000000000000000000000000000000000..ceb9d21d72cd71059461bd47f910302696f4f004
--- /dev/null
+++ b/man/clpAPI-package.Rd
@@ -0,0 +1,78 @@
+\name{clpAPI-package}
+\alias{clpAPI-package}
+\alias{clpAPI}
+
+\docType{package}
+
+\title{
+ R Interface to C API of COIN-OR Clp
+}
+
+\description{
+ A low level interface to COIN-OR Clp (COIN Linear Program code).
+}
+
+\details{
+ The package \code{clpAPI} provides access to the callable library
+ of COIN-OR Clp from within R.
+}
+
+\references{
+ The COIN-OR Clp home page at
+ \url{http://www.coin-or.org/projects/Clp.xml}
+}
+
+\author{
+ Gabriel Gelius-Dietrich
+
+ Maintainer: Gabriel Gelius-Dietrich <geliudie@uni-duesseldorf.de>
+}
+
+\keyword{ package }
+\keyword{ optimize}
+
+\examples{
+# load package
+library(clpAPI)
+
+# preparing the model
+lp <- initProbCLP()
+
+nrows <- 5
+ncols <- 8
+
+# objective function
+obj <- c(1, 0, 0, 0, 2, 0, 0, -1)
+
+# upper and lower bounds of the rows
+rlower <- c(2.5, -1000, 4, 1.8, 3)
+rupper <- c(1000, 2.1, 4, 5, 15)
+
+# upper and lower bounds of the columns
+clower <- c(2.5, 0, 0, 0, 0.5, 0, 0, 0)
+cupper <- c(1000, 4.1, 1, 1, 4, 1000, 1000, 4.3)
+
+# constraint matrix
+ia <- c(0, 4, 0, 1, 1, 2, 0, 3, 0, 4, 2, 3, 0, 4)
+ja <- c(0, 2, 4, 6, 8, 10, 11, 12, 14)
+ar <- c(3.0, 5.6, 1.0, 2.0, 1.1, 1.0, -2.0, 2.8,
+ -1.0, 1.0, 1.0, -1.2, -1.0, 1.9)
+
+# direction of optimization
+setObjDirCLP(lp, 1)
+
+# load problem data
+loadProblemCLP(lp, ncols, nrows, ia, ja, ar,
+ clower, cupper, obj, rlower, rupper)
+
+# solve lp problem
+solveInitialCLP(lp)
+
+# retrieve the results
+getSolStatusCLP(lp)
+getObjValCLP(lp)
+getColPrimCLP(lp)
+
+# remove problem object
+delProbCLP(lp)
+}
diff --git a/man/clpPtr-class.Rd b/man/clpPtr-class.Rd
new file mode 100644
index 0000000000000000000000000000000000000000..b77a75280b7c7830629d205c0f5551bd28ed8f93
--- /dev/null
+++ b/man/clpPtr-class.Rd
@@ -0,0 +1,85 @@
+\name{clpPtr-class}
+
+\Rdversion{1.1}
+\docType{class}
+
+\alias{clpPtr-class}
+\alias{clpPtr}
+\alias{isCLPpointer,clpPtr-method}
+\alias{isNULLpointerCLP,clpPtr-method}
+\alias{clpPointer,clpPtr-method}
+\alias{clpPtrType,clpPtr-method}
+\alias{clpPtrType<-,clpPtr-method}
+\alias{isCLPpointer}
+\alias{isNULLpointerCLP}
+\alias{clpPointer}
+\alias{clpPtrType}
+\alias{clpPtrType<-}
+
+\title{Class \code{"clpPtr"}}
+
+\description{
+ Structure of the class \code{"clpPtr"}. Objects of that class are
+ used to hold pointers to C structures used by COIN-OR Clp.
+}
+
+\section{Objects from the Class}{
+ Objects can be created by calls of the form\cr
+ \code{test <- initProbCLP()}.
+}
+
+\section{Slots}{
+ \describe{
+ \item{\code{clpPtrType}:}{
+ Object of class \code{"character"} giving the pointer type.
+ }
+ \item{\code{clpPointer}:}{
+ Object of class \code{"externalptr"} containig the pointer to a
+ C structure.
+ }
+ }
+}
+
+\section{Methods}{
+ \describe{
+ \item{isCLPpointer}{\code{signature(object = "clpPtr")}:
+ returns \code{TRUE} if \code{clpPointer(object)} is a pointer to a
+ COIN-OR Clp problem object, otherwise \code{FALSE}.
+ }
+ \item{isNULLpointerCLP}{\code{signature(object = "clpPtr")}:
+ returns \code{TRUE} if \code{clpPointer(object)} is a NULL pointer,
+ otherwise \code{FALSE}.
+ }
+ \item{clpPointer}{\code{signature(object = "clpPtr")}:
+ gets the \code{clpPointer} slot.
+ }
+ \item{clpPtrType}{\code{signature(object = "clpPtr")}:
+ gets the \code{clpPtrType} slot.
+ }
+ \item{clpPtrType<-}{\code{signature(object = "clpPtr")}:
+ sets the \code{clpPtrType} slot.
+ }
+ }
+}
+
+\references{
+ The COIN-OR Clp home page at
+ \url{http://www.coin-or.org/projects/Clp.xml}
+}
+
+\author{
+ Gabriel Gelius-Dietrich
+
+ Maintainer: Gabriel Gelius-Dietrich <geliudie@uni-duesseldorf.de>
+}
+
+\seealso{
+ \code{\link{initProbCLP}}
+}
+
+\examples{
+ showClass("clpPtr")
+}
+
+\keyword{ optimize }
+
diff --git a/man/copyNamesCLP.Rd b/man/copyNamesCLP.Rd
new file mode 100644
index 0000000000000000000000000000000000000000..fafa2014b01591cc5c0037ab1233dfa86edbf420
--- /dev/null
+++ b/man/copyNamesCLP.Rd
@@ -0,0 +1,56 @@
+\name{copyNamesCLP}
+\alias{copyNamesCLP}
+\alias{Clp_copyNames}
+
+\title{
+ Copy Column and Row Names in the Model
+}
+
+\description{
+ Low level interface function to the COIN-OR Clp function
+ \code{Clp_copyNames}. Consult the COIN-OR Clp documentation
+ for more detailed information.
+}
+
+\usage{
+ copyNamesCLP(lp, cnames, rnames)
+}
+
+\arguments{
+ \item{lp}{
+ An object of class \code{"\linkS4class{clpPtr}"} as returned by
+ \code{\link{initProbCLP}}. This is basically a pointer to a COIN-OR Clp
+ problem object.
+ }
+ \item{cnames}{
+ Character vector, containing the column names, must not be longer than the
+ number of columns in the model.
+ }
+ \item{rnames}{
+ Character vector, containing the row names, must not be longer than the
+ number of rows in the model.
+ }
+}
+
+\details{
+ Interface to the C function \code{copyNames} which calls
+ the COIN-OR Clp function \code{Clp_copyNames}.
+}
+
+\value{
+ NULL
+}
+
+\references{
+ The COIN-OR Clp home page at
+ \url{http://www.coin-or.org/projects/Clp.xml}
+}
+
+\author{
+ Gabriel Gelius-Dietrich
+
+ Maintainer: Gabriel Gelius-Dietrich <geliudie@uni-duesseldorf.de>
+}
+
+\keyword{ optimize }
+
diff --git a/man/delColsCLP.Rd b/man/delColsCLP.Rd
new file mode 100644
index 0000000000000000000000000000000000000000..a7eb20ca2d008f45398296f1e1d5f29f58fd0edb
--- /dev/null
+++ b/man/delColsCLP.Rd
@@ -0,0 +1,55 @@
+\name{delColsCLP}
+\alias{delColsCLP}
+\alias{Clp_deleteColumns}
+
+\title{
+ Delete Columns in the Model
+}
+
+\description{
+ Low level interface function to the COIN-OR Clp function
+ \code{Clp_deleteColumns}. Consult the COIN-OR Clp documentation
+ for more detailed information.
+}
+
+\usage{
+ delColsCLP(lp, num, j)
+}
+
+\arguments{
+ \item{lp}{
+ An object of class \code{"\linkS4class{clpPtr}"} as returned by
+ \code{\link{initProbCLP}}. This is basically a pointer to a COIN-OR Clp
+ problem object.
+ }
+ \item{num}{
+ Number of columns to delete.
+ }
+ \item{j}{
+ Integer vector, containing the indices of columns to delete
+ (the first column has index 0).
+ }
+}
+
+\details{
+ Interface to the C function \code{delCols} which calls
+ the COIN-OR Clp function \code{Clp_deleteColumns}.
+}
+
+\value{
+ NULL
+}
+
+\references{
+ The COIN-OR Clp home page at
+ \url{http://www.coin-or.org/projects/Clp.xml}
+}
+
+\author{
+ Gabriel Gelius-Dietrich
+
+ Maintainer: Gabriel Gelius-Dietrich <geliudie@uni-duesseldorf.de>
+}
+
+\keyword{ optimize }
+
diff --git a/man/delProbCLP.Rd b/man/delProbCLP.Rd
new file mode 100644
index 0000000000000000000000000000000000000000..4198af8a9a942923fccf484b0a32281f65eb3dbf
--- /dev/null
+++ b/man/delProbCLP.Rd
@@ -0,0 +1,48 @@
+\name{delProbCLP}
+\alias{delProbCLP}
+\alias{Clp_deleteModel}
+
+\title{
+ Delete Problem Object
+}
+
+\description{
+ Low level interface function to the COIN-OR Clp function
+ \code{Clp_deleteModel}. Consult the COIN-OR Clp documentation
+ for more detailed information.
+}
+
+\usage{
+ delProbCLP(lp)
+}
+
+\arguments{
+ \item{lp}{
+ An object of class \code{"\linkS4class{clpPtr}"} as returned by
+ \code{\link{initProbCLP}}. This is basically a pointer to a COIN-OR Clp
+ problem object.
+ }
+}
+
+\details{
+ Interface to the C function \code{delProb} which calls
+ the COIN-OR Clp function \code{Clp_deleteModel}.
+}
+
+\value{
+ NULL
+}
+
+\references{
+ The COIN-OR Clp home page at
+ \url{http://www.coin-or.org/projects/Clp.xml}
+}
+
+\author{
+ Gabriel Gelius-Dietrich
+
+ Maintainer: Gabriel Gelius-Dietrich <geliudie@uni-duesseldorf.de>
+}
+
+\keyword{ optimize }
+
diff --git a/man/delRowsCLP.Rd b/man/delRowsCLP.Rd
new file mode 100644
index 0000000000000000000000000000000000000000..22048b7abbcaaa280aae6ab9dae7f70fba4a80cd
--- /dev/null
+++ b/man/delRowsCLP.Rd
@@ -0,0 +1,55 @@
+\name{delRowsCLP}
+\alias{delRowsCLP}
+\alias{Clp_deleteRows}
+
+\title{
+ Delete Rows in the Model
+}
+
+\description{
+ Low level interface function to the COIN-OR Clp function
+ \code{Clp_deleteRows}. Consult the COIN-OR Clp documentation
+ for more detailed information.
+}
+
+\usage{
+ delRowsCLP(lp, num, i)
+}
+
+\arguments{
+ \item{lp}{
+ An object of class \code{"\linkS4class{clpPtr}"} as returned by
+ \code{\link{initProbCLP}}. This is basically a pointer to a COIN-OR Clp
+ problem object.
+ }
+ \item{num}{
+ Number of rows to delete.
+ }
+ \item{i}{
+ Integer vector, containing the indices of rows to delete
+ (the first row has index 0).
+ }
+}
+
+\details{
+ Interface to the C function \code{delRows} which calls
+ the COIN-OR Clp function \code{Clp_deleteRows}.
+}
+
+\value{
+ NULL
+}
+
+\references{
+ The COIN-OR Clp home page at
+ \url{http://www.coin-or.org/projects/Clp.xml}
+}
+
+\author{
+ Gabriel Gelius-Dietrich
+
+ Maintainer: Gabriel Gelius-Dietrich <geliudie@uni-duesseldorf.de>
+}
+
+\keyword{ optimize }
+
diff --git a/man/dropNamesCLP.Rd b/man/dropNamesCLP.Rd
new file mode 100644
index 0000000000000000000000000000000000000000..626162e9e2cf46b0c3b545d24b49f7a0e0aaf1d7
--- /dev/null
+++ b/man/dropNamesCLP.Rd
@@ -0,0 +1,48 @@
+\name{dropNamesCLP}
+\alias{dropNamesCLP}
+\alias{Clp_dropNames}
+
+\title{
+ Drop Names in the Model
+}
+
+\description{
+ Low level interface function to the COIN-OR Clp function
+ \code{Clp_dropNames}. Consult the COIN-OR Clp documentation
+ for more detailed information.
+}
+
+\usage{
+ dropNamesCLP(lp)
+}
+
+\arguments{
+ \item{lp}{
+ An object of class \code{"\linkS4class{clpPtr}"} as returned by
+ \code{\link{initProbCLP}}. This is basically a pointer to a COIN-OR Clp
+ problem object.
+ }
+}
+
+\details{
+ Interface to the C function \code{dropNames} which calls
+ the COIN-OR Clp function \code{Clp_dropNames}.
+}
+
+\value{
+ NULL
+}
+
+\references{
+ The COIN-OR Clp home page at
+ \url{http://www.coin-or.org/projects/Clp.xml}
+}
+
+\author{
+ Gabriel Gelius-Dietrich
+
+ Maintainer: Gabriel Gelius-Dietrich <geliudie@uni-duesseldorf.de>
+}
+
+\keyword{ optimize }
+
diff --git a/man/dualCLP.Rd b/man/dualCLP.Rd
new file mode 100644
index 0000000000000000000000000000000000000000..f48801839a64b739423729d4849061bf2304dfff
--- /dev/null
+++ b/man/dualCLP.Rd
@@ -0,0 +1,51 @@
+\name{dualCLP}
+\alias{dualCLP}
+\alias{Clp_dual}
+
+\title{
+ Solve LP Problem with the Dual Simplex Method
+}
+
+\description{
+ Low level interface function to the COIN-OR Clp function
+ \code{Clp_dual}. Consult the COIN-OR Clp documentation
+ for more detailed information.
+}
+
+\usage{
+ dualCLP(lp, ifValP = 0)
+}
+
+\arguments{
+ \item{lp}{
+ An object of class \code{"\linkS4class{clpPtr}"} as returned by
+ \code{\link{initProbCLP}}. This is basically a pointer to a COIN-OR Clp
+ problem object.
+ }
+ \item{ifValP}{
+ An integer value.
+ }
+}
+
+\details{
+ Interface to the C function \code{dual} which calls
+ the COIN-OR Clp function \code{Clp_dual}.
+}
+
+\value{
+ A return code.
+}
+
+\references{
+ The COIN-OR Clp home page at
+ \url{http://www.coin-or.org/projects/Clp.xml}
+}
+
+\author{
+ Gabriel Gelius-Dietrich
+
+ Maintainer: Gabriel Gelius-Dietrich <geliudie@uni-duesseldorf.de>
+}
+
+\keyword{ optimize }
+
diff --git a/man/getColDualCLP.Rd b/man/getColDualCLP.Rd
new file mode 100644
index 0000000000000000000000000000000000000000..52d9e34c53c208b170c9c76f13f9b09c8a505364
--- /dev/null
+++ b/man/getColDualCLP.Rd
@@ -0,0 +1,49 @@
+\name{getColDualCLP}
+\alias{getColDualCLP}
+\alias{Clp_dualColumnSolution}
+
+\title{
+ Retrieve all Column Dual Values
+}
+
+\description{
+ Low level interface function to the COIN-OR Clp function
+ \code{Clp_dualColumnSolution}. Consult the COIN-OR Clp
+ documentation for more detailed information.
+}
+
+\usage{
+ getColDualCLP(lp)
+}
+
+\arguments{
+ \item{lp}{
+ An object of class \code{"\linkS4class{clpPtr}"} as returned by
+ \code{\link{initProbCLP}}. This is basically a pointer to a COIN-OR Clp
+ problem object.
+ }
+}
+
+\details{
+ Interface to the C function \code{getColDual} which calls
+ the COIN-OR Clp functions \code{Clp_numberColumns} and
+ \code{Clp_dualColumnSolution}.
+}
+
+\value{
+ Returns all dual values of the stuctural variables as a numeric vector.
+}
+
+\references{
+ The COIN-OR Clp home page at
+ \url{http://www.coin-or.org/projects/Clp.xml}
+}
+
+\author{
+ Gabriel Gelius-Dietrich
+
+ Maintainer: Gabriel Gelius-Dietrich <geliudie@uni-duesseldorf.de>
+}
+
+\keyword{ optimize }
+
diff --git a/man/getColLowerCLP.Rd b/man/getColLowerCLP.Rd
new file mode 100644
index 0000000000000000000000000000000000000000..bc9abcf14d5c3d99c8edc0b4c059bf8c8db60596
--- /dev/null
+++ b/man/getColLowerCLP.Rd
@@ -0,0 +1,50 @@
+\name{getColLowerCLP}
+\alias{getColLowerCLP}
+\alias{Clp_columnLower}
+
+\title{
+ Retrieve Column Lower Bound
+}
+
+\description{
+ Low level interface function to the COIN-OR Clp function
+ \code{Clp_columnLower}. Consult the COIN-OR Clp documentation
+ for more detailed information.
+}
+
+\usage{
+ getColLowerCLP(lp)
+}
+
+\arguments{
+ \item{lp}{
+ An object of class \code{"\linkS4class{clpPtr}"} as returned by
+ \code{\link{initProbCLP}}. This is basically a pointer to a COIN-OR Clp
+ problem object.
+ }
+}
+
+\details{
+ Interface to the C function \code{getColLower} which calls
+ the COIN-OR Clp functions \code{Clp_numberColumns} and
+ \code{Clp_columnLower}.
+}
+
+\value{
+ The lower bounds of the models columns (the corresponding
+ structural variables) are returned.
+}
+
+\references{
+ The COIN-OR Clp home page at
+ \url{http://www.coin-or.org/projects/Clp.xml}
+}
+
+\author{
+ Gabriel Gelius-Dietrich
+
+ Maintainer: Gabriel Gelius-Dietrich <geliudie@uni-duesseldorf.de>
+}
+
+\keyword{ optimize }
+
diff --git a/man/getColPrimCLP.Rd b/man/getColPrimCLP.Rd
new file mode 100644
index 0000000000000000000000000000000000000000..5279983f3bf7f871cfe0736126b6f8fe5171c65a
--- /dev/null
+++ b/man/getColPrimCLP.Rd
@@ -0,0 +1,49 @@
+\name{getColPrimCLP}
+\alias{getColPrimCLP}
+\alias{Clp_primalColumnSolution}
+
+\title{
+ Retrieve all Column Primal Values
+}
+
+\description{
+ Low level interface function to the COIN-OR Clp function
+ \code{Clp_primalColumnSolution}. Consult the COIN-OR Clp
+ documentation for more detailed information.
+}
+
+\usage{
+ getColPrimCLP(lp)
+}
+
+\arguments{
+ \item{lp}{
+ An object of class \code{"\linkS4class{clpPtr}"} as returned by
+ \code{\link{initProbCLP}}. This is basically a pointer to a COIN-OR Clp
+ problem object.
+ }
+}
+
+\details{
+ Interface to the C function \code{getColPrim} which calls
+ the COIN-OR Clp functions \code{Clp_numberColumns} and
+ \code{Clp_primalColumnSolution}.
+}
+
+\value{
+ Returns all primal values of the stuctural variables as a numeric vector.
+}
+
+\references{
+ The COIN-OR Clp home page at
+ \url{http://www.coin-or.org/projects/Clp.xml}
+}
+
+\author{
+ Gabriel Gelius-Dietrich
+
+ Maintainer: Gabriel Gelius-Dietrich <geliudie@uni-duesseldorf.de>
+}
+
+\keyword{ optimize }
+
diff --git a/man/getColUpperCLP.Rd b/man/getColUpperCLP.Rd
new file mode 100644
index 0000000000000000000000000000000000000000..02bf1b200879bf18ab87d2819f6b613056d63ea4
--- /dev/null
+++ b/man/getColUpperCLP.Rd
@@ -0,0 +1,50 @@
+\name{getColUpperCLP}
+\alias{getColUpperCLP}
+\alias{Clp_columnUpper}
+
+\title{
+ Retrieve Column Upper Bounds
+}
+
+\description{
+ Low level interface function to the COIN-OR Clp function
+ \code{Clp_columnUpper}. Consult the COIN-OR Clp documentation
+ for more detailed information.
+}
+
+\usage{
+ getColUpperCLP(lp)
+}
+
+\arguments{
+ \item{lp}{
+ An object of class \code{"\linkS4class{clpPtr}"} as returned by
+ \code{\link{initProbCLP}}. This is basically a pointer to a COIN-OR Clp
+ problem object.
+ }
+}
+
+\details{
+ Interface to the C function \code{getColLower} which calls
+ the COIN-OR Clp functions \code{Clp_numberColumns} and
+ \code{Clp_columnUpper}.
+}
+
+\value{
+ The upper bounds of the models columns (the corresponding
+ structural variables) are returned.
+}
+
+\references{
+ The COIN-OR Clp home page at
+ \url{http://www.coin-or.org/projects/Clp.xml}
+}
+
+\author{
+ Gabriel Gelius-Dietrich
+
+ Maintainer: Gabriel Gelius-Dietrich <geliudie@uni-duesseldorf.de>
+}
+
+\keyword{ optimize }
+
diff --git a/man/getIndCLP.Rd b/man/getIndCLP.Rd
new file mode 100644
index 0000000000000000000000000000000000000000..a870cac328338bab9690c1b74d408f0b26afb888
--- /dev/null
+++ b/man/getIndCLP.Rd
@@ -0,0 +1,50 @@
+\name{getIndCLP}
+\alias{getIndCLP}
+\alias{Clp_getIndices}
+
+\title{
+ Retrieve Row Indices of the Non Zero Elements in the Constraint Matrix
+}
+
+\description{
+ Low level interface function to the COIN-OR Clp function
+ \code{Clp_getIndices}. Consult the COIN-OR Clp
+ documentation for more detailed information.
+}
+
+\usage{
+ getIndCLP(lp)
+}
+
+\arguments{
+ \item{lp}{
+ An object of class \code{"\linkS4class{clpPtr}"} as returned by
+ \code{\link{initProbCLP}}. This is basically a pointer to a COIN-OR Clp
+ problem object.
+ }
+}
+
+\details{
+ Interface to the C function \code{getInd} which calls
+ the COIN-OR Clp functions \code{Clp_numberColumns} and
+ \code{Clp_getIndices}.
+}
+
+\value{
+ An integer vector containing the row Indices of the
+ non zero elements in the constraint matrix.
+}
+
+\references{
+ The COIN-OR Clp home page at
+ \url{http://www.coin-or.org/projects/Clp.xml}
+}
+
+\author{
+ Gabriel Gelius-Dietrich
+
+ Maintainer: Gabriel Gelius-Dietrich <geliudie@uni-duesseldorf.de>
+}
+
+\keyword{ optimize }
+
diff --git a/man/getLogLevelCLP.Rd b/man/getLogLevelCLP.Rd
new file mode 100644
index 0000000000000000000000000000000000000000..8bffd7e874af3dc26e9e07c7ac985057d01d6250
--- /dev/null
+++ b/man/getLogLevelCLP.Rd
@@ -0,0 +1,49 @@
+\name{getLogLevelCLP}
+\alias{getLogLevelCLP}
+\alias{Clp_logLevel}
+
+\title{
+ Retrieve the Log Level Flag
+}
+
+\description{
+ Low level interface function to the COIN-OR Clp function
+ \code{Clp_logLevel}. Consult the COIN-OR Clp
+ documentation for more detailed information.
+}
+
+\usage{
+ getLogLevelCLP(lp)
+}
+
+\arguments{
+ \item{lp}{
+ An object of class \code{"\linkS4class{clpPtr}"} as returned by
+ \code{\link{initProbCLP}}. This is basically a pointer to a COIN-OR Clp
+ problem object.
+ }
+}
+
+\details{
+ Interface to the C function \code{getLogLevel} which calls
+ the COIN-OR Clp function \code{Clp_logLevel}.
+}
+
+\value{
+ Returns the log level flag: 0: nothing, 1: just final, 2: just
+ factorizations, 3: as 2 plus a bit more, 4: verbose.
+}
+
+\references{
+ The COIN-OR Clp home page at
+ \url{http://www.coin-or.org/projects/Clp.xml}
+}
+
+\author{
+ Gabriel Gelius-Dietrich
+
+ Maintainer: Gabriel Gelius-Dietrich <geliudie@uni-duesseldorf.de>
+}
+
+\keyword{ optimize }
+
diff --git a/man/getNnzCLP.Rd b/man/getNnzCLP.Rd
new file mode 100644
index 0000000000000000000000000000000000000000..d8233644a53604562d09294da2cefafd847378fd
--- /dev/null
+++ b/man/getNnzCLP.Rd
@@ -0,0 +1,51 @@
+\name{getNnzCLP}
+\alias{getNnzCLP}
+\alias{Clp_getElements}
+
+\title{
+ Retrieve the Non Zero Elements of the Constraint Matrix
+ in Column Major Order.
+}
+
+\description{
+ Low level interface function to the COIN-OR Clp function
+ \code{Clp_getElements}. Consult the COIN-OR Clp
+ documentation for more detailed information.
+}
+
+\usage{
+ getNnzCLP(lp)
+}
+
+\arguments{
+ \item{lp}{
+ An object of class \code{"\linkS4class{clpPtr}"} as returned by
+ \code{\link{initProbCLP}}. This is basically a pointer to a COIN-OR Clp
+ problem object.
+ }
+}
+
+\details{
+ Interface to the C function \code{getNnz} which calls
+ the COIN-OR Clp functions \code{Clp_getNumElements} and
+ \code{Clp_getElements}.
+}
+
+\value{
+ A numeric vector containing the non zero elements of the
+ constraint matrix in column major order.
+}
+
+\references{
+ The COIN-OR Clp home page at
+ \url{http://www.coin-or.org/projects/Clp.xml}
+}
+
+\author{
+ Gabriel Gelius-Dietrich
+
+ Maintainer: Gabriel Gelius-Dietrich <geliudie@uni-duesseldorf.de>
+}
+
+\keyword{ optimize }
+
diff --git a/man/getNumColsCLP.Rd b/man/getNumColsCLP.Rd
new file mode 100644
index 0000000000000000000000000000000000000000..36f0bb6c5ffa2ebcccad392693eca66a1f0527ea
--- /dev/null
+++ b/man/getNumColsCLP.Rd
@@ -0,0 +1,48 @@
+\name{getNumColsCLP}
+\alias{getNumColsCLP}
+\alias{Clp_numberColumns}
+
+\title{
+ Retrieve the Current Number of Columns in the Model
+}
+
+\description{
+ Low level interface function to the COIN-OR Clp function
+ \code{Clp_numberColumns}. Consult the COIN-OR Clp
+ documentation for more detailed information.
+}
+
+\usage{
+ getNumColsCLP(lp)
+}
+
+\arguments{
+ \item{lp}{
+ An object of class \code{"\linkS4class{clpPtr}"} as returned by
+ \code{\link{initProbCLP}}. This is basically a pointer to a COIN-OR Clp
+ problem object.
+ }
+}
+
+\details{
+ Interface to the C function \code{getNumCols} which calls
+ the COIN-OR Clp function \code{Clp_numberColumns}.
+}
+
+\value{
+ The current number of columns in the model.
+}
+
+\references{
+ The COIN-OR Clp home page at
+ \url{http://www.coin-or.org/projects/Clp.xml}
+}
+
+\author{
+ Gabriel Gelius-Dietrich
+
+ Maintainer: Gabriel Gelius-Dietrich <geliudie@uni-duesseldorf.de>
+}
+
+\keyword{ optimize }
+
diff --git a/man/getNumNnzCLP.Rd b/man/getNumNnzCLP.Rd
new file mode 100644
index 0000000000000000000000000000000000000000..f13687a19cee1faa73ae85adb9b04b0f92dd88a2
--- /dev/null
+++ b/man/getNumNnzCLP.Rd
@@ -0,0 +1,48 @@
+\name{getNumNnzCLP}
+\alias{getNumNnzCLP}
+\alias{Clp_getNumElements}
+
+\title{
+ Retrieve the Current Number of Non Zero Elements in the Model
+}
+
+\description{
+ Low level interface function to the COIN-OR Clp function
+ \code{Clp_getNumElements}. Consult the COIN-OR Clp
+ documentation for more detailed information.
+}
+
+\usage{
+ getNumNnzCLP(lp)
+}
+
+\arguments{
+ \item{lp}{
+ An object of class \code{"\linkS4class{clpPtr}"} as returned by
+ \code{\link{initProbCLP}}. This is basically a pointer to a COIN-OR Clp
+ problem object.
+ }
+}
+
+\details{
+ Interface to the C function \code{getNumNnz} which calls
+ the COIN-OR Clp function \code{Clp_getNumElements}.
+}
+
+\value{
+ Returns the current number of non zero elements in the model.
+}
+
+\references{
+ The COIN-OR Clp home page at
+ \url{http://www.coin-or.org/projects/Clp.xml}
+}
+
+\author{
+ Gabriel Gelius-Dietrich
+
+ Maintainer: Gabriel Gelius-Dietrich <geliudie@uni-duesseldorf.de>
+}
+
+\keyword{ optimize }
+
diff --git a/man/getNumRowsCLP.Rd b/man/getNumRowsCLP.Rd
new file mode 100644
index 0000000000000000000000000000000000000000..b00b57306ab019f372ec002aef023c03419a247d
--- /dev/null
+++ b/man/getNumRowsCLP.Rd
@@ -0,0 +1,48 @@
+\name{getNumRowsCLP}
+\alias{getNumRowsCLP}
+\alias{Clp_numberRows}
+
+\title{
+ Retrieve the Current Number of Rows in the Model
+}
+
+\description{
+ Low level interface function to the COIN-OR Clp function
+ \code{Clp_numberRows}. Consult the COIN-OR Clp
+ documentation for more detailed information.
+}
+
+\usage{
+ getNumRowsCLP(lp)
+}
+
+\arguments{
+ \item{lp}{
+ An object of class \code{"\linkS4class{clpPtr}"} as returned by
+ \code{\link{initProbCLP}}. This is basically a pointer to a COIN-OR Clp
+ problem object.
+ }
+}
+
+\details{
+ Interface to the C function \code{getNumRows} which calls
+ the COIN-OR Clp function \code{Clp_numberRows}.
+}
+
+\value{
+ The current number of rows in the model.
+}
+
+\references{
+ The COIN-OR Clp home page at
+ \url{http://www.coin-or.org/projects/Clp.xml}
+}
+
+\author{
+ Gabriel Gelius-Dietrich
+
+ Maintainer: Gabriel Gelius-Dietrich <geliudie@uni-duesseldorf.de>
+}
+
+\keyword{ optimize }
+
diff --git a/man/getObjCoefsCLP.Rd b/man/getObjCoefsCLP.Rd
new file mode 100644
index 0000000000000000000000000000000000000000..a6a9a7839c6add63897542bfc7f3c250e066e344
--- /dev/null
+++ b/man/getObjCoefsCLP.Rd
@@ -0,0 +1,49 @@
+\name{getObjCoefsCLP}
+\alias{getObjCoefsCLP}
+\alias{Clp_objective}
+
+\title{
+ Retrieve Objective Coefficients
+}
+
+\description{
+ Low level interface function to the COIN-OR Clp function
+ \code{Clp_objective}. Consult the COIN-OR Clp documentation
+ for more detailed information.
+}
+
+\usage{
+ getObjCoefsCLP(lp)
+}
+
+\arguments{
+ \item{lp}{
+ An object of class \code{"\linkS4class{clpPtr}"} as returned by
+ \code{\link{initProbCLP}}. This is basically a pointer to a COIN-OR Clp
+ problem object.
+ }
+}
+
+\details{
+ Interface to the C function \code{getObjCoefs} which calls
+ the COIN-OR Clp functions \code{Clp_numberColumns} and
+ \code{Clp_objective}.
+}
+
+\value{
+ A numeric vector containing the objective coefficients.
+}
+
+\references{
+ The COIN-OR Clp home page at
+ \url{http://www.coin-or.org/projects/Clp.xml}
+}
+
+\author{
+ Gabriel Gelius-Dietrich
+
+ Maintainer: Gabriel Gelius-Dietrich <geliudie@uni-duesseldorf.de>
+}
+
+\keyword{ optimize }
+
diff --git a/man/getObjDirCLP.Rd b/man/getObjDirCLP.Rd
new file mode 100644
index 0000000000000000000000000000000000000000..a004dae87477b2ff9bf34301ea6f92e7a80a4a26
--- /dev/null
+++ b/man/getObjDirCLP.Rd
@@ -0,0 +1,49 @@
+\name{getObjDirCLP}
+\alias{getObjDirCLP}
+\alias{Clp_optimizationDirection}
+
+\title{
+ Retrieve Optimization Direction Flag
+}
+
+\description{
+ Low level interface function to the COIN-OR Clp function
+ \code{Clp_optimizationDirection}. Consult the COIN-OR Clp
+ documentation for more detailed information.
+}
+
+\usage{
+ getObjDirCLP(lp)
+}
+
+\arguments{
+ \item{lp}{
+ An object of class \code{"\linkS4class{clpPtr}"} as returned by
+ \code{\link{initProbCLP}}. This is basically a pointer to a COIN-OR Clp
+ problem object.
+ }
+}
+
+\details{
+ Interface to the C function \code{getObjDir} which calls
+ the COIN-OR Clp function \code{Clp_optimizationDirection}.
+}
+
+\value{
+ Returns the optimization direction flag: 1: minimize,
+ -1: maximize, 0: ignore.
+}
+
+\references{
+ The COIN-OR Clp home page at
+ \url{http://www.coin-or.org/projects/Clp.xml}
+}
+
+\author{
+ Gabriel Gelius-Dietrich
+
+ Maintainer: Gabriel Gelius-Dietrich <geliudie@uni-duesseldorf.de>
+}
+
+\keyword{ optimize }
+
diff --git a/man/getObjValCLP.Rd b/man/getObjValCLP.Rd
new file mode 100644
index 0000000000000000000000000000000000000000..53b846c692a8821df41f0b2b7c0af1af5a5c51ed
--- /dev/null
+++ b/man/getObjValCLP.Rd
@@ -0,0 +1,48 @@
+\name{getObjValCLP}
+\alias{getObjValCLP}
+\alias{Clp_objectiveValue}
+
+\title{
+ Retrieve the Value of the Objective Function After Optimization
+}
+
+\description{
+ Low level interface function to the COIN-OR Clp function
+ \code{Clp_objectiveValue}. Consult the COIN-OR Clp
+ documentation for more detailed information.
+}
+
+\usage{
+ getObjValCLP(lp)
+}
+
+\arguments{
+ \item{lp}{
+ An object of class \code{"\linkS4class{clpPtr}"} as returned by
+ \code{\link{initProbCLP}}. This is basically a pointer to a COIN-OR Clp
+ problem object.
+ }
+}
+
+\details{
+ Interface to the C function \code{getObjVal} which calls
+ the COIN-OR Clp function \code{Clp_objectiveValue}.
+}
+
+\value{
+ Returns the value of the objective function after optimization.
+}
+
+\references{
+ The COIN-OR Clp home page at
+ \url{http://www.coin-or.org/projects/Clp.xml}
+}
+
+\author{
+ Gabriel Gelius-Dietrich
+
+ Maintainer: Gabriel Gelius-Dietrich <geliudie@uni-duesseldorf.de>
+}
+
+\keyword{ optimize }
+
diff --git a/man/getRowDualCLP.Rd b/man/getRowDualCLP.Rd
new file mode 100644
index 0000000000000000000000000000000000000000..52a9517a223112a883713cd734183f4b5da19263
--- /dev/null
+++ b/man/getRowDualCLP.Rd
@@ -0,0 +1,49 @@
+\name{getRowDualCLP}
+\alias{getRowDualCLP}
+\alias{Clp_dualRowSolution}
+
+\title{
+ Retrieve all Row Dual Values
+}
+
+\description{
+ Low level interface function to the COIN-OR Clp function
+ \code{Clp_dualRowSolution}. Consult the COIN-OR Clp
+ documentation for more detailed information.
+}
+
+\usage{
+ getRowDualCLP(lp)
+}
+
+\arguments{
+ \item{lp}{
+ An object of class \code{"\linkS4class{clpPtr}"} as returned by
+ \code{\link{initProbCLP}}. This is basically a pointer to a COIN-OR Clp
+ problem object.
+ }
+}
+
+\details{
+ Interface to the C function \code{getRowDual} which calls
+ the COIN-OR Clp functions \code{Clp_numberRows} and
+ \code{Clp_dualRowSolution}.
+}
+
+\value{
+ Returns all dual values of the auxiliary variables as a numeric vector.
+}
+
+\references{
+ The COIN-OR Clp home page at
+ \url{http://www.coin-or.org/projects/Clp.xml}
+}
+
+\author{
+ Gabriel Gelius-Dietrich
+
+ Maintainer: Gabriel Gelius-Dietrich <geliudie@uni-duesseldorf.de>
+}
+
+\keyword{ optimize }
+
diff --git a/man/getRowLowerCLP.Rd b/man/getRowLowerCLP.Rd
new file mode 100644
index 0000000000000000000000000000000000000000..bed6a182a62e8e15c5cab6f36da521d134a1af39
--- /dev/null
+++ b/man/getRowLowerCLP.Rd
@@ -0,0 +1,49 @@
+\name{getRowLowerCLP}
+\alias{getRowLowerCLP}
+\alias{Clp_rowLower}
+
+\title{
+ Retrieve Row Lower Bound
+}
+
+\description{
+ Low level interface function to the COIN-OR Clp function
+ \code{Clp_rowLower}. Consult the COIN-OR Clp documentation
+ for more detailed information.
+}
+
+\usage{
+ getRowLowerCLP(lp)
+}
+
+\arguments{
+ \item{lp}{
+ An object of class \code{"\linkS4class{clpPtr}"} as returned by
+ \code{\link{initProbCLP}}. This is basically a pointer to a COIN-OR Clp
+ problem object.
+ }
+}
+
+\details{
+ Interface to the C function \code{getRowLower} which calls
+ the COIN-OR Clp functions \code{Clp_numberRows} and
+ \code{Clp_rowLower}.
+}
+
+\value{
+ The lower bounds of the models rows are returned.
+}
+
+\references{
+ The COIN-OR Clp home page at
+ \url{http://www.coin-or.org/projects/Clp.xml}
+}
+
+\author{
+ Gabriel Gelius-Dietrich
+
+ Maintainer: Gabriel Gelius-Dietrich <geliudie@uni-duesseldorf.de>
+}
+
+\keyword{ optimize }
+
diff --git a/man/getRowPrimCLP.Rd b/man/getRowPrimCLP.Rd
new file mode 100644
index 0000000000000000000000000000000000000000..838cd411c2113e5bde7e640af8ddf86be85ca1e6
--- /dev/null
+++ b/man/getRowPrimCLP.Rd
@@ -0,0 +1,49 @@
+\name{getRowPrimCLP}
+\alias{getRowPrimCLP}
+\alias{Clp_primalRowSolution}
+
+\title{
+ Retrieve all Row Primal Values
+}
+
+\description{
+ Low level interface function to the COIN-OR Clp function
+ \code{Clp_primalRowSolution}. Consult the COIN-OR Clp
+ documentation for more detailed information.
+}
+
+\usage{
+ getRowPrimCLP(lp)
+}
+
+\arguments{
+ \item{lp}{
+ An object of class \code{"\linkS4class{clpPtr}"} as returned by
+ \code{\link{initProbCLP}}. This is basically a pointer to a COIN-OR Clp
+ problem object.
+ }
+}
+
+\details{
+ Interface to the C function \code{getRowPrim} which calls
+ the COIN-OR Clp functions \code{Clp_numberRows} and
+ \code{Clp_primalRowSolution}.
+}
+
+\value{
+ Returns all primal values of the auxiliary variables as a numeric vector.
+}
+
+\references{
+ The COIN-OR Clp home page at
+ \url{http://www.coin-or.org/projects/Clp.xml}
+}
+
+\author{
+ Gabriel Gelius-Dietrich
+
+ Maintainer: Gabriel Gelius-Dietrich <geliudie@uni-duesseldorf.de>
+}
+
+\keyword{ optimize }
+
diff --git a/man/getRowUpperCLP.Rd b/man/getRowUpperCLP.Rd
new file mode 100644
index 0000000000000000000000000000000000000000..fb3b78d77d68097fdd0a2a0e681dced0168eabd9
--- /dev/null
+++ b/man/getRowUpperCLP.Rd
@@ -0,0 +1,49 @@
+\name{getRowUpperCLP}
+\alias{getRowUpperCLP}
+\alias{Clp_rowUpper}
+
+\title{
+ Retrieve Row Upper Bound
+}
+
+\description{
+ Low level interface function to the COIN-OR Clp function
+ \code{Clp_rowUpper}. Consult the COIN-OR Clp documentation
+ for more detailed information.
+}
+
+\usage{
+ getRowUpperCLP(lp)
+}
+
+\arguments{
+ \item{lp}{
+ An object of class \code{"\linkS4class{clpPtr}"} as returned by
+ \code{\link{initProbCLP}}. This is basically a pointer to a COIN-OR Clp
+ problem object.
+ }
+}
+
+\details{
+ Interface to the C function \code{getRowUpper} which calls
+ the COIN-OR Clp functions \code{Clp_numberRows} and
+ \code{Clp_rowUpper}.
+}
+
+\value{
+ The upper bounds of the models rows are returned.
+}
+
+\references{
+ The COIN-OR Clp home page at
+ \url{http://www.coin-or.org/projects/Clp.xml}
+}
+
+\author{
+ Gabriel Gelius-Dietrich
+
+ Maintainer: Gabriel Gelius-Dietrich <geliudie@uni-duesseldorf.de>
+}
+
+\keyword{ optimize }
+
diff --git a/man/getScaleFlagCLP.Rd b/man/getScaleFlagCLP.Rd
new file mode 100644
index 0000000000000000000000000000000000000000..33415d3c83733d4ac17640176bf09c0add39f0dc
--- /dev/null
+++ b/man/getScaleFlagCLP.Rd
@@ -0,0 +1,49 @@
+\name{getScaleFlagCLP}
+\alias{getScaleFlagCLP}
+\alias{Clp_scalingFlag}
+
+\title{
+ Retrieve the Scale Flag
+}
+
+\description{
+ Low level interface function to the COIN-OR Clp function
+ \code{Clp_scalingFlag}. Consult the COIN-OR Clp
+ documentation for more detailed information.
+}
+
+\usage{
+ getScaleFlagCLP(lp)
+}
+
+\arguments{
+ \item{lp}{
+ An object of class \code{"\linkS4class{clpPtr}"} as returned by
+ \code{\link{initProbCLP}}. This is basically a pointer to a COIN-OR Clp
+ problem object.
+ }
+}
+
+\details{
+ Interface to the C function \code{getScaleFlag} which calls
+ the COIN-OR Clp function \code{Clp_scalingFlag}.
+}
+
+\value{
+ Returns the scaling flag: 0: off, 1: equilibrium, 2: geometric,
+ 3: auto, 4: dynamic (later - maybe not implemented in CLP?).
+}
+
+\references{
+ The COIN-OR Clp home page at
+ \url{http://www.coin-or.org/projects/Clp.xml}
+}
+
+\author{
+ Gabriel Gelius-Dietrich
+
+ Maintainer: Gabriel Gelius-Dietrich <geliudie@uni-duesseldorf.de>
+}
+
+\keyword{ optimize }
+
diff --git a/man/getSolStatusCLP.Rd b/man/getSolStatusCLP.Rd
new file mode 100644
index 0000000000000000000000000000000000000000..26d8226bc81d26eb1a8c040efe6078cac63edd60
--- /dev/null
+++ b/man/getSolStatusCLP.Rd
@@ -0,0 +1,50 @@
+\name{getSolStatusCLP}
+\alias{getSolStatusCLP}
+\alias{Clp_status}
+
+\title{
+ Retrieve the Solution Status
+}
+
+\description{
+ Low level interface function to the COIN-OR Clp function
+ \code{Clp_status}. Consult the COIN-OR Clp
+ documentation for more detailed information.
+}
+
+\usage{
+ getSolStatusCLP(lp)
+}
+
+\arguments{
+ \item{lp}{
+ An object of class \code{"\linkS4class{clpPtr}"} as returned by
+ \code{\link{initProbCLP}}. This is basically a pointer to a COIN-OR Clp
+ problem object.
+ }
+}
+
+\details{
+ Interface to the C function \code{getSolStatus} which calls
+ the COIN-OR Clp function \code{Clp_status}.
+}
+
+\value{
+ The solution status: 0: optimal, 1: primal infeasible,
+ 2: dual infeasible, 3: stopped on iterations etc,
+ 4: stopped due to errors.
+}
+
+\references{
+ The COIN-OR Clp home page at
+ \url{http://www.coin-or.org/projects/Clp.xml}
+}
+
+\author{
+ Gabriel Gelius-Dietrich
+
+ Maintainer: Gabriel Gelius-Dietrich <geliudie@uni-duesseldorf.de>
+}
+
+\keyword{ optimize }
+
diff --git a/man/getVecLenCLP.Rd b/man/getVecLenCLP.Rd
new file mode 100644
index 0000000000000000000000000000000000000000..0c7f678833a3c1b3c43b237b7f3df5195cebb535
--- /dev/null
+++ b/man/getVecLenCLP.Rd
@@ -0,0 +1,50 @@
+\name{getVecLenCLP}
+\alias{getVecLenCLP}
+\alias{Clp_getVectorLengths}
+
+\title{
+ Retrieve the Number of Non Zero Elements per Column
+}
+
+\description{
+ Low level interface function to the COIN-OR Clp function
+ \code{Clp_getVectorLengths}. Consult the COIN-OR Clp
+ documentation for more detailed information.
+}
+
+\usage{
+ getVecLenCLP(lp)
+}
+
+\arguments{
+ \item{lp}{
+ An object of class \code{"\linkS4class{clpPtr}"} as returned by
+ \code{\link{initProbCLP}}. This is basically a pointer to a COIN-OR Clp
+ problem object.
+ }
+}
+
+\details{
+ Interface to the C function \code{getVecLen} which calls
+ the COIN-OR Clp functions \code{Clp_numberColumns} and
+ \code{Clp_getVectorLengths}.
+}
+
+\value{
+ An integer vector containing the number of non zero
+ elements per column.
+}
+
+\references{
+ The COIN-OR Clp home page at
+ \url{http://www.coin-or.org/projects/Clp.xml}
+}
+
+\author{
+ Gabriel Gelius-Dietrich
+
+ Maintainer: Gabriel Gelius-Dietrich <geliudie@uni-duesseldorf.de>
+}
+
+\keyword{ optimize }
+
diff --git a/man/getVecStartCLP.Rd b/man/getVecStartCLP.Rd
new file mode 100644
index 0000000000000000000000000000000000000000..a0611219882cb41d503297bd49c8f9ea3f23ccd7
--- /dev/null
+++ b/man/getVecStartCLP.Rd
@@ -0,0 +1,50 @@
+\name{getVecStartCLP}
+\alias{getVecStartCLP}
+\alias{Clp_getVectorStarts}
+
+\title{
+ Retrieve Column Starts in Constraint Matrix
+}
+
+\description{
+ Low level interface function to the COIN-OR Clp function
+ \code{Clp_getVectorStarts}. Consult the COIN-OR Clp
+ documentation for more detailed information.
+}
+
+\usage{
+ getVecStartCLP(lp)
+}
+
+\arguments{
+ \item{lp}{
+ An object of class \code{"\linkS4class{clpPtr}"} as returned by
+ \code{\link{initProbCLP}}. This is basically a pointer to a COIN-OR Clp
+ problem object.
+ }
+}
+
+\details{
+ Interface to the C function \code{getVecStart} which calls
+ the COIN-OR Clp functions \code{Clp_numberColumns} and
+ \code{Clp_getVectorStarts}.
+}
+
+\value{
+ An integer vector containing the column starts in
+ the constraint matrix.
+}
+
+\references{
+ The COIN-OR Clp home page at
+ \url{http://www.coin-or.org/projects/Clp.xml}
+}
+
+\author{
+ Gabriel Gelius-Dietrich
+
+ Maintainer: Gabriel Gelius-Dietrich <geliudie@uni-duesseldorf.de>
+}
+
+\keyword{ optimize }
+
diff --git a/man/idiotCLP.Rd b/man/idiotCLP.Rd
new file mode 100644
index 0000000000000000000000000000000000000000..95d05af8a237427f0e29e904bb3bd82dedc66092
--- /dev/null
+++ b/man/idiotCLP.Rd
@@ -0,0 +1,51 @@
+\name{idiotCLP}
+\alias{idiotCLP}
+\alias{Clp_idiot}
+
+\title{
+ Solve LP Problem with the idiot Code
+}
+
+\description{
+ Low level interface function to the COIN-OR Clp function
+ \code{Clp_idiot}. Consult the COIN-OR Clp documentation
+ for more detailed information.
+}
+
+\usage{
+ idiotCLP(lp, thd = 0)
+}
+
+\arguments{
+ \item{lp}{
+ An object of class \code{"\linkS4class{clpPtr}"} as returned by
+ \code{\link{initProbCLP}}. This is basically a pointer to a COIN-OR Clp
+ problem object.
+ }
+ \item{thd}{
+ An integer value.
+ }
+}
+
+\details{
+ Interface to the C function \code{idiot} which calls
+ the COIN-OR Clp function \code{Clp_idiot}.
+}
+
+\value{
+ NULL
+}
+
+\references{
+ The COIN-OR Clp home page at
+ \url{http://www.coin-or.org/projects/Clp.xml}
+}
+
+\author{
+ Gabriel Gelius-Dietrich
+
+ Maintainer: Gabriel Gelius-Dietrich <geliudie@uni-duesseldorf.de>
+}
+
+\keyword{ optimize }
+
diff --git a/man/initProbCLP.Rd b/man/initProbCLP.Rd
new file mode 100644
index 0000000000000000000000000000000000000000..443f9a008f1861a8f7527a329a00c111e6de42c0
--- /dev/null
+++ b/man/initProbCLP.Rd
@@ -0,0 +1,46 @@
+\name{initProbCLP}
+\alias{initProbCLP}
+\alias{Clp_newModel}
+
+\title{
+ Create a COIN-OR Clp Problem Object
+}
+
+\description{
+ Low level interface function to the COIN-OR Clp function
+ \code{Clp_newModel}. Consult the COIN-OR Clp documentation
+ for more detailed information.
+}
+
+\usage{
+ initProbCLP(ptrtype = "clp_prob")
+}
+
+\arguments{
+ \item{ptrtype}{
+ A name for the pointer to a COIN-OR Clp problem object.
+ }
+}
+
+\details{
+ Interface to the C function \code{initProb} which calls
+ the COIN-OR Clp function \code{Clp_newModel}.
+}
+
+\value{
+ An instance of class \code{"\linkS4class{clpPtr}"}.
+}
+
+\references{
+ The COIN-OR Clp home page at
+ \url{http://www.coin-or.org/projects/Clp.xml}
+}
+
+\author{
+ Gabriel Gelius-Dietrich
+
+ Maintainer: Gabriel Gelius-Dietrich <geliudie@uni-duesseldorf.de>
+}
+
+\keyword{ optimize }
+
diff --git a/man/lengthNamesCLP.Rd b/man/lengthNamesCLP.Rd
new file mode 100644
index 0000000000000000000000000000000000000000..78f42d139156ffac82cd9b06edf46cbcf0a7e3b7
--- /dev/null
+++ b/man/lengthNamesCLP.Rd
@@ -0,0 +1,48 @@
+\name{lengthNamesCLP}
+\alias{lengthNamesCLP}
+\alias{Clp_lengthNames}
+
+\title{
+ Length of the Names in the Model
+}
+
+\description{
+ Low level interface function to the COIN-OR Clp function
+ \code{Clp_lengthNames}. Consult the COIN-OR Clp documentation
+ for more detailed information.
+}
+
+\usage{
+ lengthNamesCLP(lp)
+}
+
+\arguments{
+ \item{lp}{
+ An object of class \code{"\linkS4class{clpPtr}"} as returned by
+ \code{\link{initProbCLP}}. This is basically a pointer to a COIN-OR Clp
+ problem object.
+ }
+}
+
+\details{
+ Interface to the C function \code{lengthNames} which calls
+ the COIN-OR Clp function \code{Clp_lengthNames}.
+}
+
+\value{
+ Number of characters of the longest name in the Model.
+}
+
+\references{
+ The COIN-OR Clp home page at
+ \url{http://www.coin-or.org/projects/Clp.xml}
+}
+
+\author{
+ Gabriel Gelius-Dietrich
+
+ Maintainer: Gabriel Gelius-Dietrich <geliudie@uni-duesseldorf.de>
+}
+
+\keyword{ optimize }
+
diff --git a/man/loadMatrixCLP.Rd b/man/loadMatrixCLP.Rd
new file mode 100644
index 0000000000000000000000000000000000000000..13110a1a46202c21a7eb2893c514b082f67e0a7f
--- /dev/null
+++ b/man/loadMatrixCLP.Rd
@@ -0,0 +1,62 @@
+\name{loadMatrixCLP}
+\alias{loadMatrixCLP}
+
+\title{
+ Load Constraint Matrix
+}
+
+\description{
+ Low level interface function to the COIN-OR Clp function
+ \code{Clp_loadProblem}. Consult the COIN-OR Clp
+ documentation for more detailed information.
+}
+
+\usage{
+ loadMatrixCLP(lp, ncols, nrows, ia, ja, ra)
+}
+
+\arguments{
+ \item{lp}{
+ An object of class \code{"\linkS4class{clpPtr}"} as returned by
+ \code{\link{initProbCLP}}. This is basically a pointer to a COIN-OR Clp
+ problem object.
+ }
+ \item{ncols}{
+ Number of Columns.
+ }
+ \item{nrows}{
+ Number of Rows.
+ }
+ \item{ia}{
+ Row indices in the constraint matrix.
+ }
+ \item{ja}{
+ Column starts in constraint matrix.
+ }
+ \item{ra}{
+ Non zero elements of the constraint matrix.
+ }
+}
+
+\details{
+ Interface to the C function \code{loadMatrix} which calls
+ the COIN-OR Clp function \code{Clp_loadProblem}.
+}
+
+\value{
+ NULL
+}
+
+\references{
+ The COIN-OR Clp home page at
+ \url{http://www.coin-or.org/projects/Clp.xml}
+}
+
+\author{
+ Gabriel Gelius-Dietrich
+
+ Maintainer: Gabriel Gelius-Dietrich <geliudie@uni-duesseldorf.de>
+}
+
+\keyword{ optimize }
+
diff --git a/man/loadProblemCLP.Rd b/man/loadProblemCLP.Rd
new file mode 100644
index 0000000000000000000000000000000000000000..fa7fb591bc705d73b94b3ad73366b0df44d75844
--- /dev/null
+++ b/man/loadProblemCLP.Rd
@@ -0,0 +1,80 @@
+\name{loadProblemCLP}
+\alias{loadProblemCLP}
+\alias{Clp_loadProblem}
+
+\title{
+ Load Problem Data
+}
+
+\description{
+ Low level interface function to the COIN-OR Clp function
+ \code{Clp_loadProblem}. Consult the COIN-OR Clp
+ documentation for more detailed information.
+}
+
+\usage{
+ loadProblemCLP(lp, ncols, nrows, ia, ja, ra,
+ lb = NULL, ub = NULL, obj_coef = NULL,
+ rlb = NULL, rub = NULL)
+}
+
+\arguments{
+ \item{lp}{
+ An object of class \code{"\linkS4class{clpPtr}"} as returned by
+ \code{\link{initProbCLP}}. This is basically a pointer to a COIN-OR Clp
+ problem object.
+ }
+ \item{ncols}{
+ Number of Columns.
+ }
+ \item{nrows}{
+ Number of Rows.
+ }
+ \item{ia}{
+ Row indices in the constraint matrix.
+ }
+ \item{ja}{
+ Column starts in constraint matrix.
+ }
+ \item{ra}{
+ Non zero elements of the constraint matrix.
+ }
+ \item{lb}{
+ Column lower bounds.
+ }
+ \item{ub}{
+ Column upper bounds.
+ }
+ \item{obj_coef}{
+ Objective coefficients.
+ }
+ \item{rlb}{
+ Row lower bounds.
+ }
+ \item{rub}{
+ Row upper bounds.
+ }
+}
+
+\details{
+ Interface to the C function \code{loadProblem} which calls
+ the COIN-OR Clp function \code{Clp_loadProblem}.
+}
+
+\value{
+ NULL
+}
+
+\references{
+ The COIN-OR Clp home page at
+ \url{http://www.coin-or.org/projects/Clp.xml}
+}
+
+\author{
+ Gabriel Gelius-Dietrich
+
+ Maintainer: Gabriel Gelius-Dietrich <geliudie@uni-duesseldorf.de>
+}
+
+\keyword{ optimize }
+
diff --git a/man/primalCLP.Rd b/man/primalCLP.Rd
new file mode 100644
index 0000000000000000000000000000000000000000..d6d708b79a342937ba720f85fc540fad75404ed1
--- /dev/null
+++ b/man/primalCLP.Rd
@@ -0,0 +1,51 @@
+\name{primalCLP}
+\alias{primalCLP}
+\alias{Clp_primal}
+
+\title{
+ Solve LP Problem with the Primal Simplex Method
+}
+
+\description{
+ Low level interface function to the COIN-OR Clp function
+ \code{Clp_primal}. Consult the COIN-OR Clp documentation
+ for more detailed information.
+}
+
+\usage{
+ primalCLP(lp, ifValP = 0)
+}
+
+\arguments{
+ \item{lp}{
+ An object of class \code{"\linkS4class{clpPtr}"} as returned by
+ \code{\link{initProbCLP}}. This is basically a pointer to a COIN-OR Clp
+ problem object.
+ }
+ \item{ifValP}{
+ An integer value.
+ }
+}
+
+\details{
+ Interface to the C function \code{primal} which calls
+ the COIN-OR Clp function \code{Clp_primal}.
+}
+
+\value{
+ A return code.
+}
+
+\references{
+ The COIN-OR Clp home page at
+ \url{http://www.coin-or.org/projects/Clp.xml}
+}
+
+\author{
+ Gabriel Gelius-Dietrich
+
+ Maintainer: Gabriel Gelius-Dietrich <geliudie@uni-duesseldorf.de>
+}
+
+\keyword{ optimize }
+
diff --git a/man/printModelCLP.Rd b/man/printModelCLP.Rd
new file mode 100644
index 0000000000000000000000000000000000000000..49feebd7aa9618b0dc7de8c1a794ceeef133e00b
--- /dev/null
+++ b/man/printModelCLP.Rd
@@ -0,0 +1,52 @@
+\name{printModelCLP}
+\alias{printModelCLP}
+\alias{Clp_printModel}
+
+\title{
+ Print the Model to STDOUT
+}
+
+\description{
+ Low level interface function to the COIN-OR Clp function
+ \code{Clp_printModel}. Consult the COIN-OR Clp
+ documentation for more detailed information.
+}
+
+\usage{
+ printModelCLP(lp, prefix = "CLPmodel")
+}
+
+
+\arguments{
+ \item{lp}{
+ An object of class \code{"\linkS4class{clpPtr}"} as returned by
+ \code{\link{initProbCLP}}. This is basically a pointer to a COIN-OR Clp
+ problem object.
+ }
+ \item{prefix}{
+ A character string containing a name for the model.
+ }
+}
+
+\details{
+ Interface to the C function \code{printModel} which calls
+ the COIN-OR Clp function \code{Clp_printModel}.
+}
+
+\value{
+ NULL
+}
+
+\references{
+ The COIN-OR Clp home page at
+ \url{http://www.coin-or.org/projects/Clp.xml}
+}
+
+\author{
+ Gabriel Gelius-Dietrich
+
+ Maintainer: Gabriel Gelius-Dietrich <geliudie@uni-duesseldorf.de>
+}
+
+\keyword{ optimize }
+
diff --git a/man/probNameCLP.Rd b/man/probNameCLP.Rd
new file mode 100644
index 0000000000000000000000000000000000000000..10e381053d2e601bd0c0b7d27bf603ed9f1fab5f
--- /dev/null
+++ b/man/probNameCLP.Rd
@@ -0,0 +1,51 @@
+\name{probNameCLP}
+\alias{probNameCLP}
+\alias{Clp_problemName}
+
+\title{
+ Set Problem Name
+}
+
+\description{
+ Low level interface function to the COIN-OR Clp function
+ \code{Clp_problemName}. Consult the COIN-OR Clp documentation
+ for more detailed information.
+
+}
+
+\usage{
+ probNameCLP(lp, pname)
+}
+
+\arguments{
+ \item{lp}{
+ An object of class \code{"\linkS4class{clpPtr}"} as returned by
+ \code{\link{initProbCLP}}. This is basically a pointer to a COIN-OR Clp
+ problem object.
+ }
+ \item{pname}{
+ A single character string containing the problem name.
+ }
+}
+
+\details{
+ Interface to the C function \code{probName} which calls
+ the COIN-OR Clp function \code{Clp_problemName}.
+}
+
+\value{
+ NULL
+}
+
+\references{
+ The COIN-OR Clp home page at
+ \url{http://www.coin-or.org/projects/Clp.xml}
+}
+
+\author{
+ Gabriel Gelius-Dietrich
+
+ Maintainer: Gabriel Gelius-Dietrich <geliudie@uni-duesseldorf.de>
+}
+
+\keyword{ optimize }
diff --git a/man/readMPSCLP.Rd b/man/readMPSCLP.Rd
new file mode 100644
index 0000000000000000000000000000000000000000..4f1ce2bd03ae89c9fbcb1a44ace09adb33960285
--- /dev/null
+++ b/man/readMPSCLP.Rd
@@ -0,0 +1,57 @@
+\name{readMPSCLP}
+\alias{readMPSCLP}
+\alias{Clp_readMps}
+
+\title{
+ Read Problem in (Free) MPS Format
+}
+
+\description{
+ Low level interface function to the COIN-OR Clp function
+ \code{Clp_readMps}. Consult the COIN-OR Clp documentation
+ for more detailed information.
+}
+
+\usage{
+ readMPSCLP(lp, fname, keepNames = TRUE, ignoreErrors = FALSE)
+}
+
+\arguments{
+ \item{lp}{
+ An object of class \code{"\linkS4class{clpPtr}"} as returned by
+ \code{\link{initProbCLP}}. This is basically a pointer to a COIN-OR Clp
+ problem object.
+ }
+ \item{fname}{
+ A filename.
+ }
+ \item{keepNames}{
+ Boolean, keep variable names.
+ }
+ \item{ignoreErrors}{
+ If set to \code{TRUE}, errors will be ignored.
+ }
+}
+
+\details{
+ Interface to the C function \code{readMPS} which calls
+ the COIN-OR Clp function \code{Clp_readMps}.
+}
+
+\value{
+ Returns zero on success, otherwise non zero.
+}
+
+\references{
+ The COIN-OR Clp home page at
+ \url{http://www.coin-or.org/projects/Clp.xml}
+}
+
+\author{
+ Gabriel Gelius-Dietrich
+
+ Maintainer: Gabriel Gelius-Dietrich <geliudie@uni-duesseldorf.de>
+}
+
+\keyword{ optimize }
+
diff --git a/man/resizeCLP.Rd b/man/resizeCLP.Rd
new file mode 100644
index 0000000000000000000000000000000000000000..6e39c0fc9e6aaef2184c239e61bc41e9f83435f3
--- /dev/null
+++ b/man/resizeCLP.Rd
@@ -0,0 +1,66 @@
+\name{resizeCLP}
+\alias{resizeCLP}
+\alias{Clp_resize}
+
+\title{
+ Resize a Model
+}
+
+\description{
+ Low level interface function to the COIN-OR Clp function
+ \code{Clp_resize}. Consult the COIN-OR Clp
+ documentation for more detailed information.
+}
+
+\usage{
+ resizeCLP(lp, nrows, ncols)
+}
+
+\arguments{
+ \item{lp}{
+ An object of class \code{"\linkS4class{clpPtr}"} as returned by
+ \code{\link{initProbCLP}}. This is basically a pointer to a COIN-OR Clp
+ problem object.
+ }
+ \item{nrows}{
+ Number of rows.
+ }
+ \item{ncols}{
+ Number of columns.
+ }
+}
+
+\details{
+ Interface to the C function \code{resize} which calls
+ the COIN-OR Clp function \code{Clp_resize}.
+
+ The function \code{resize} can produce a larger model.
+ If the current number of rows and columns is \emph{n}
+ and \emph{m} respectively and you set nrows to \emph{i}
+ and ncols to \emph{j}, the new number of rows and columns
+ will be \emph{i} and \emph{j}. It is not possible to
+ scale down the model. In order to delete rows or columns,
+ use \code{\link{delRowsCLP}} or \code{\link{delColsCLP}}.
+}
+
+\value{
+ NULL
+}
+
+\references{
+ The COIN-OR Clp home page at
+ \url{http://www.coin-or.org/projects/Clp.xml}
+}
+
+\author{
+ Gabriel Gelius-Dietrich
+
+ Maintainer: Gabriel Gelius-Dietrich <geliudie@uni-duesseldorf.de>
+}
+
+\seealso{
+ \code{\link{delRowsCLP}} and \code{\link{delColsCLP}}.
+}
+
+\keyword{ optimize }
+
diff --git a/man/restoreModelCLP.Rd b/man/restoreModelCLP.Rd
new file mode 100644
index 0000000000000000000000000000000000000000..5ef4e0f1d7307c58a687ffba86efd2c9881a1b90
--- /dev/null
+++ b/man/restoreModelCLP.Rd
@@ -0,0 +1,51 @@
+\name{restoreModelCLP}
+\alias{restoreModelCLP}
+\alias{Clp_restoreModel}
+
+\title{
+ Restore model from file
+}
+
+\description{
+ Low level interface function to the COIN-OR Clp function
+ \code{Clp_restoreModel}. Consult the COIN-OR Clp documentation
+ for more detailed information.
+}
+
+\usage{
+ restoreModelCLP(lp, fname)
+}
+
+\arguments{
+ \item{lp}{
+ An object of class \code{"\linkS4class{clpPtr}"} as returned by
+ \code{\link{initProbCLP}}. This is basically a pointer to a COIN-OR Clp
+ problem object.
+ }
+ \item{fname}{
+ A filename.
+ }
+}
+
+\details{
+ Interface to the C function \code{restoreModel} which calls
+ the COIN-OR Clp function \code{Clp_restoreModel}.
+}
+
+\value{
+ Returns zero on success, otherwise non zero.
+}
+
+\references{
+ The COIN-OR Clp home page at
+ \url{http://www.coin-or.org/projects/Clp.xml}
+}
+
+\author{
+ Gabriel Gelius-Dietrich
+
+ Maintainer: Gabriel Gelius-Dietrich <geliudie@uni-duesseldorf.de>
+}
+
+\keyword{ optimize }
+
diff --git a/man/return_codeCLP.Rd b/man/return_codeCLP.Rd
new file mode 100644
index 0000000000000000000000000000000000000000..1a90ab213dd96eb04f2657851478fe9845c3277a
--- /dev/null
+++ b/man/return_codeCLP.Rd
@@ -0,0 +1,41 @@
+\name{return_codeCLP}
+\alias{return_codeCLP}
+
+\title{
+ Translates a COIN-OR Clp Return Code into a Human
+ Readable String
+}
+
+\description{
+ Translates a COIN-OR Clp return code into a human
+ readable string.
+}
+
+\usage{
+ return_codeCLP(code)
+}
+
+\arguments{
+ \item{code}{
+ Return code from COIN-OR Clp.
+ }
+}
+
+\value{
+ A character string associated with the COIN-OR Clp
+ return code.
+}
+
+\references{
+ The COIN-OR Clp home page at
+ \url{http://www.coin-or.org/projects/Clp.xml}
+}
+
+\author{
+ Gabriel Gelius-Dietrich
+
+ Maintainer: Gabriel Gelius-Dietrich <geliudie@uni-duesseldorf.de>
+}
+
+\keyword{ optimize }
+
diff --git a/man/saveModelCLP.Rd b/man/saveModelCLP.Rd
new file mode 100644
index 0000000000000000000000000000000000000000..ccd4b859c899cac7b37cb1ef14b3a9e9d2bc48dd
--- /dev/null
+++ b/man/saveModelCLP.Rd
@@ -0,0 +1,51 @@
+\name{saveModelCLP}
+\alias{saveModelCLP}
+\alias{Clp_saveModel}
+
+\title{
+ Save model to file
+}
+
+\description{
+ Low level interface function to the COIN-OR Clp function
+ \code{Clp_saveModel}. Consult the COIN-OR Clp documentation
+ for more detailed information.
+}
+
+\usage{
+ saveModelCLP(lp, fname)
+}
+
+\arguments{
+ \item{lp}{
+ An object of class \code{"\linkS4class{clpPtr}"} as returned by
+ \code{\link{initProbCLP}}. This is basically a pointer to a COIN-OR Clp
+ problem object.
+ }
+ \item{fname}{
+ A filename.
+ }
+}
+
+\details{
+ Interface to the C function \code{saveModel} which calls
+ the COIN-OR Clp function \code{Clp_saveModel}.
+}
+
+\value{
+ Returns zero on success, otherwise non zero.
+}
+
+\references{
+ The COIN-OR Clp home page at
+ \url{http://www.coin-or.org/projects/Clp.xml}
+}
+
+\author{
+ Gabriel Gelius-Dietrich
+
+ Maintainer: Gabriel Gelius-Dietrich <geliudie@uni-duesseldorf.de>
+}
+
+\keyword{ optimize }
+
diff --git a/man/scaleModelCLP.Rd b/man/scaleModelCLP.Rd
new file mode 100644
index 0000000000000000000000000000000000000000..a20f472da9af6028a89cc9508911002f059fcd7e
--- /dev/null
+++ b/man/scaleModelCLP.Rd
@@ -0,0 +1,53 @@
+\name{scaleModelCLP}
+\alias{scaleModelCLP}
+\alias{Clp_scaling}
+
+\title{
+ Set/Unset the Scaling Flag (Method)
+}
+
+\description{
+ Low level interface function to the COIN-OR Clp function
+ \code{Clp_scaling}. Consult the COIN-OR Clp
+ documentation for more detailed information.
+}
+
+\usage{
+ scaleModelCLP(lp, mode)
+}
+
+\arguments{
+ \item{lp}{
+ An object of class \code{"\linkS4class{clpPtr}"} as returned by
+ \code{\link{initProbCLP}}. This is basically a pointer to a COIN-OR Clp
+ problem object.
+ }
+ \item{mode}{
+ Scaling flag: 0: off, 1: equilibrium, 2: geometric,
+ 3: auto, 4: dynamic (later - maybe not implemented
+ in CLP?).
+ }
+}
+
+\details{
+ Interface to the C function \code{scaleModel} which calls
+ the COIN-OR Clp function \code{Clp_scaling}.
+}
+
+\value{
+ NULL
+}
+
+\references{
+ The COIN-OR Clp home page at
+ \url{http://www.coin-or.org/projects/Clp.xml}
+}
+
+\author{
+ Gabriel Gelius-Dietrich
+
+ Maintainer: Gabriel Gelius-Dietrich <geliudie@uni-duesseldorf.de>
+}
+
+\keyword{ optimize }
+
diff --git a/man/setLogLevelCLP.Rd b/man/setLogLevelCLP.Rd
new file mode 100644
index 0000000000000000000000000000000000000000..d7452ecfa48066ff17aec635e51569d622bcc385
--- /dev/null
+++ b/man/setLogLevelCLP.Rd
@@ -0,0 +1,52 @@
+\name{setLogLevelCLP}
+\alias{setLogLevelCLP}
+\alias{Clp_setLogLevel}
+
+\title{
+ Set the Amount of Output to STDOUT
+}
+
+\description{
+ Low level interface function to the COIN-OR Clp function
+ \code{Clp_setLogLevel}. Consult the COIN-OR Clp
+ documentation for more detailed information.
+}
+
+\usage{
+ setLogLevelCLP(lp, amount)
+}
+
+\arguments{
+ \item{lp}{
+ An object of class \code{"\linkS4class{clpPtr}"} as returned by
+ \code{\link{initProbCLP}}. This is basically a pointer to a COIN-OR Clp
+ problem object.
+ }
+ \item{amount}{
+ Log level flag: 0: nothing, 1: just final, 2: just
+ factorizations, 3: as 2 plus a bit more, 4: verbose.
+ }
+}
+
+\details{
+ Interface to the C function \code{setLogLevel} which calls
+ the COIN-OR Clp function \code{Clp_setLogLevel}.
+}
+
+\value{
+ NULL
+}
+
+\references{
+ The COIN-OR Clp home page at
+ \url{http://www.coin-or.org/projects/Clp.xml}
+}
+
+\author{
+ Gabriel Gelius-Dietrich
+
+ Maintainer: Gabriel Gelius-Dietrich <geliudie@uni-duesseldorf.de>
+}
+
+\keyword{ optimize }
+
diff --git a/man/setObjDirCLP.Rd b/man/setObjDirCLP.Rd
new file mode 100644
index 0000000000000000000000000000000000000000..2da198e964aad5145fbf526ff0d9dc68b720c08a
--- /dev/null
+++ b/man/setObjDirCLP.Rd
@@ -0,0 +1,52 @@
+\name{setObjDirCLP}
+\alias{setObjDirCLP}
+\alias{Clp_setOptimizationDirection}
+
+\title{
+ Set/Change Optimization Direction Flag
+}
+
+\description{
+ Low level interface function to the COIN-OR Clp function
+ \code{Clp_setOptimizationDirection}. Consult the COIN-OR Clp
+ documentation for more detailed information.
+}
+
+\usage{
+ setObjDirCLP(lp, lpdir)
+}
+
+\arguments{
+ \item{lp}{
+ An object of class \code{"\linkS4class{clpPtr}"} as returned by
+ \code{\link{initProbCLP}}. This is basically a pointer to a COIN-OR Clp
+ problem object.
+ }
+ \item{lpdir}{
+ Optimization direction flag: 1: minimize, -1: maximize,
+ 0: ignore.
+ }
+}
+
+\details{
+ Interface to the C function \code{setObjDir} which calls
+ the COIN-OR Clp function \code{Clp_setOptimizationDirection}.
+}
+
+\value{
+ NULL
+}
+
+\references{
+ The COIN-OR Clp home page at
+ \url{http://www.coin-or.org/projects/Clp.xml}
+}
+
+\author{
+ Gabriel Gelius-Dietrich
+
+ Maintainer: Gabriel Gelius-Dietrich <geliudie@uni-duesseldorf.de>
+}
+
+\keyword{ optimize }
+
diff --git a/man/solveInitialBarrierCLP.Rd b/man/solveInitialBarrierCLP.Rd
new file mode 100644
index 0000000000000000000000000000000000000000..3ff33a95c7ae270f4ad67ad448f8e4cdc3eaba4b
--- /dev/null
+++ b/man/solveInitialBarrierCLP.Rd
@@ -0,0 +1,49 @@
+\name{solveInitialBarrierCLP}
+\alias{solveInitialBarrierCLP}
+\alias{Clp_initialBarrierSolve}
+
+\title{
+ Solve LP Problem with the Initial Barrier Method
+}
+
+\description{
+ Low level interface function to the COIN-OR Clp function
+ \code{Clp_initialBarrierSolve}. Consult the COIN-OR Clp
+ documentation for more detailed information.
+}
+
+\usage{
+ solveInitialBarrierCLP(lp)
+}
+
+\arguments{
+ \item{lp}{
+ An object of class \code{"\linkS4class{clpPtr}"} as returned by
+ \code{\link{initProbCLP}}. This is basically a pointer to a COIN-OR Clp
+ problem object.
+ }
+}
+
+\details{
+ Interface to the C function \code{solveInitialBarrier}
+ which calls the COIN-OR Clp function
+ \code{Clp_initialBarrierSolve}.
+}
+
+\value{
+ A return code.
+}
+
+\references{
+ The COIN-OR Clp home page at
+ \url{http://www.coin-or.org/projects/Clp.xml}
+}
+
+\author{
+ Gabriel Gelius-Dietrich
+
+ Maintainer: Gabriel Gelius-Dietrich <geliudie@uni-duesseldorf.de>
+}
+
+\keyword{ optimize }
+
diff --git a/man/solveInitialBarrierNoCrossCLP.Rd b/man/solveInitialBarrierNoCrossCLP.Rd
new file mode 100644
index 0000000000000000000000000000000000000000..1cb619a1f3a5b26aef09ff3523af7539ebbcab33
--- /dev/null
+++ b/man/solveInitialBarrierNoCrossCLP.Rd
@@ -0,0 +1,50 @@
+\name{solveInitialBarrierNoCrossCLP}
+\alias{solveInitialBarrierNoCrossCLP}
+\alias{Clp_initialBarrierNoCrossSolve}
+
+\title{
+ Solve LP Problem with the Initial Barrier Method
+ (no Crossover)
+}
+
+\description{
+ Low level interface function to the COIN-OR Clp function
+ \code{Clp_initialBarrierNoCrossSolve}. Consult the
+ COIN-OR Clp documentation for more detailed information.
+}
+
+\usage{
+ solveInitialBarrierNoCrossCLP(lp)
+}
+
+\arguments{
+ \item{lp}{
+ An object of class \code{"\linkS4class{clpPtr}"} as returned by
+ \code{\link{initProbCLP}}. This is basically a pointer to a COIN-OR Clp
+ problem object.
+ }
+}
+
+\details{
+ Interface to the C function \code{solveInitialBarrierNoCross}
+ which calls the COIN-OR Clp function
+ \code{Clp_initialBarrierNoCrossSolve}.
+}
+
+\value{
+ A return code.
+}
+
+\references{
+ The COIN-OR Clp home page at
+ \url{http://www.coin-or.org/projects/Clp.xml}
+}
+
+\author{
+ Gabriel Gelius-Dietrich
+
+ Maintainer: Gabriel Gelius-Dietrich <geliudie@uni-duesseldorf.de>
+}
+
+\keyword{ optimize }
+
diff --git a/man/solveInitialCLP.Rd b/man/solveInitialCLP.Rd
new file mode 100644
index 0000000000000000000000000000000000000000..b510d303bca77e5bb5dc0c990049f7c1c92792fb
--- /dev/null
+++ b/man/solveInitialCLP.Rd
@@ -0,0 +1,49 @@
+\name{solveInitialCLP}
+\alias{solveInitialCLP}
+\alias{Clp_initialSolve}
+
+\title{
+ Solve LP Problem with a General Solve Algorithm
+}
+
+\description{
+ Low level interface function to the COIN-OR Clp function
+ \code{Clp_initialSolve}. Consult the COIN-OR Clp
+ documentation for more detailed information.
+}
+
+\usage{
+ solveInitialCLP(lp)
+}
+
+\arguments{
+ \item{lp}{
+ An object of class \code{"\linkS4class{clpPtr}"} as returned by
+ \code{\link{initProbCLP}}. This is basically a pointer to a COIN-OR Clp
+ problem object.
+ }
+}
+
+\details{
+ Interface to the C function \code{solveInitial}
+ which calls the COIN-OR Clp function
+ \code{Clp_initialSolve}.
+}
+
+\value{
+ A return code.
+}
+
+\references{
+ The COIN-OR Clp home page at
+ \url{http://www.coin-or.org/projects/Clp.xml}
+}
+
+\author{
+ Gabriel Gelius-Dietrich
+
+ Maintainer: Gabriel Gelius-Dietrich <geliudie@uni-duesseldorf.de>
+}
+
+\keyword{ optimize }
+
diff --git a/man/solveInitialDualCLP.Rd b/man/solveInitialDualCLP.Rd
new file mode 100644
index 0000000000000000000000000000000000000000..7d06d1709b6aecae630d0e1720b230f9fafa8bc1
--- /dev/null
+++ b/man/solveInitialDualCLP.Rd
@@ -0,0 +1,49 @@
+\name{solveInitialDualCLP}
+\alias{solveInitialDualCLP}
+\alias{Clp_initialDualSolve}
+
+\title{
+ Solve LP Problem with the Initial Dual Simplex Method
+}
+
+\description{
+ Low level interface function to the COIN-OR Clp function
+ \code{Clp_initialDualSolve}. Consult the COIN-OR Clp
+ documentation for more detailed information.
+}
+
+\usage{
+ solveInitialDualCLP(lp)
+}
+
+\arguments{
+ \item{lp}{
+ An object of class \code{"\linkS4class{clpPtr}"} as returned by
+ \code{\link{initProbCLP}}. This is basically a pointer to a COIN-OR Clp
+ problem object.
+ }
+}
+
+\details{
+ Interface to the C function \code{solveInitialDual}
+ which calls the COIN-OR Clp function
+ \code{Clp_initialDualSolve}.
+}
+
+\value{
+ A return code.
+}
+
+\references{
+ The COIN-OR Clp home page at
+ \url{http://www.coin-or.org/projects/Clp.xml}
+}
+
+\author{
+ Gabriel Gelius-Dietrich
+
+ Maintainer: Gabriel Gelius-Dietrich <geliudie@uni-duesseldorf.de>
+}
+
+\keyword{ optimize }
+
diff --git a/man/solveInitialPrimalCLP.Rd b/man/solveInitialPrimalCLP.Rd
new file mode 100644
index 0000000000000000000000000000000000000000..335049ef86c2c0c257396811cab352ef6f59aae4
--- /dev/null
+++ b/man/solveInitialPrimalCLP.Rd
@@ -0,0 +1,49 @@
+\name{solveInitialPrimalCLP}
+\alias{solveInitialPrimalCLP}
+\alias{Clp_initialPrimalSolve}
+
+\title{
+ Solve LP Problem with the Initial Primal Simplex Method
+}
+
+\description{
+ Low level interface function to the COIN-OR Clp function
+ \code{Clp_initialPrimalSolve}. Consult the COIN-OR Clp
+ documentation for more detailed information.
+}
+
+\usage{
+ solveInitialPrimalCLP(lp)
+}
+
+\arguments{
+ \item{lp}{
+ An object of class \code{"\linkS4class{clpPtr}"} as returned by
+ \code{\link{initProbCLP}}. This is basically a pointer to a COIN-OR Clp
+ problem object.
+ }
+}
+
+\details{
+ Interface to the C function \code{solveInitialPrimal}
+ which calls the COIN-OR Clp function
+ \code{Clp_initialPrimalSolve}.
+}
+
+\value{
+ A return code.
+}
+
+\references{
+ The COIN-OR Clp home page at
+ \url{http://www.coin-or.org/projects/Clp.xml}
+}
+
+\author{
+ Gabriel Gelius-Dietrich
+
+ Maintainer: Gabriel Gelius-Dietrich <geliudie@uni-duesseldorf.de>
+}
+
+\keyword{ optimize }
+
diff --git a/man/status_codeCLP.Rd b/man/status_codeCLP.Rd
new file mode 100644
index 0000000000000000000000000000000000000000..415961e0e2ff8411054fbad131c8c17d7083cfe8
--- /dev/null
+++ b/man/status_codeCLP.Rd
@@ -0,0 +1,41 @@
+\name{status_codeCLP}
+\alias{status_codeCLP}
+
+\title{
+ Translates a COIN-OR Clp Status Value into a Human
+ Readable String
+}
+
+\description{
+ Translates a COIN-OR Clp status value into a human
+ readable string.
+}
+
+\usage{
+ status_codeCLP(code)
+}
+
+\arguments{
+ \item{code}{
+ Status code from COIN-OR Clp.
+ }
+}
+
+\value{
+ A character string associated with the COIN-OR Clp
+ status code.
+}
+
+\references{
+ The COIN-OR Clp home page at
+ \url{http://www.coin-or.org/projects/Clp.xml}
+}
+
+\author{
+ Gabriel Gelius-Dietrich
+
+ Maintainer: Gabriel Gelius-Dietrich <geliudie@uni-duesseldorf.de>
+}
+
+\keyword{ optimize }
+
diff --git a/man/versionCLP.Rd b/man/versionCLP.Rd
new file mode 100644
index 0000000000000000000000000000000000000000..68f903d9122139ba508efbadfd1529b204c7e590
--- /dev/null
+++ b/man/versionCLP.Rd
@@ -0,0 +1,38 @@
+\name{versionCLP}
+\alias{versionCLP}
+\alias{CLP_VERSION}
+
+\title{
+ Determine COIN-OR Clp Callable Library Version
+}
+
+\description{
+ Low level interface function to the COIN-OR Clp constant \code{CLP_VERSION}.
+ Consult the COIN-OR Clp documentation for more detailed information.
+}
+
+\usage{
+ versionCLP()
+}
+
+\details{
+ Interface to the C function \code{version} which returns the COIN-OR Clp
+ version number.
+}
+
+\value{
+ Returns a single character value containing the COIN-OR Clp version number.
+}
+
+\references{
+ The COIN-OR Clp home page at
+ \url{http://www.coin-or.org/projects/Clp.xml}
+}
+
+\author{
+ Gabriel Gelius-Dietrich
+
+ Maintainer: Gabriel Gelius-Dietrich <geliudie@uni-duesseldorf.de>
+}
+
+\keyword{ optimize }
diff --git a/src/Makevars.in b/src/Makevars.in
new file mode 100644
index 0000000000000000000000000000000000000000..f03b4d39e17631bd443edc49d5d1275b76391553
--- /dev/null
+++ b/src/Makevars.in
@@ -0,0 +1,3 @@
+PKG_CFLAGS=@PKG_CFLAGS@
+PKG_CPPFLAGS=@PKG_CPPFLAGS@
+PKG_LIBS=@PKG_LIBS@
diff --git a/src/Makevars.win b/src/Makevars.win
new file mode 100644
index 0000000000000000000000000000000000000000..ff18ecb1bab38340bd4d78e765ccc09b4dc47880
--- /dev/null
+++ b/src/Makevars.win
@@ -0,0 +1,2 @@
+PKG_CPPFLAGS=-g -D_R_=1 -DUSE_R=1 -I${CLP_PATH}/include/coin
+PKG_LIBS=-L${CLP_PATH}/lib/coin -L${CLP_PATH}/lib -lClp -lCoinUtils -lstdc++
diff --git a/src/clpAPI.c b/src/clpAPI.c
new file mode 100644
index 0000000000000000000000000000000000000000..8b590e8feab2a9995a310c17fb3e03ab9add8dba
--- /dev/null
+++ b/src/clpAPI.c
@@ -0,0 +1,1214 @@
+/* clpAPI.c
+ R interface to COIN-OR Clp.
+
+ Copyright (C) 2011-2013 Gabriel Gelius-Dietrich, Dpt. for Bioinformatics,
+ Institute for Informatics, Heinrich-Heine-University, Duesseldorf, Germany.
+ All right reserved.
+ Email: geliudie@uni-duesseldorf.de
+
+ This file is part of clpAPI.
+
+ ClpAPI is free software: you can redistribute it and/or modify
+ it under the terms of the GNU General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ ClpAPI is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU General Public License for more details.
+
+ You should have received a copy of the GNU General Public License
+ along with clpAPI. If not, see <http://www.gnu.org/licenses/>.
+*/
+
+
+#include "clpAPI.h"
+
+
+static SEXP tagCLPprob;
+
+
+/* -------------------------------------------------------------------------- */
+/* Finalizer */
+/* -------------------------------------------------------------------------- */
+
+/* -------------------------------------------------------------------------- */
+/* finalizer for clp problem objects */
+static void clpProbFinalizer (SEXP lp) {
+ if (!R_ExternalPtrAddr(lp)) {
+ return;
+ }
+ else {
+ delProb(lp);
+ }
+}
+
+
+/* -------------------------------------------------------------------------- */
+/* help functions */
+/* -------------------------------------------------------------------------- */
+
+/* check for pointer to clp */
+SEXP isCLPptr(SEXP ptr) {
+
+ SEXP out = R_NilValue;
+
+ if ( (TYPEOF(ptr) == EXTPTRSXP) &&
+ (R_ExternalPtrTag(ptr) == tagCLPprob) ) {
+ out = Rf_ScalarLogical(1);
+ }
+ else {
+ out = Rf_ScalarLogical(0);
+ }
+
+ return out;
+}
+
+
+/* check for NULL pointer */
+SEXP isNULLptr(SEXP ptr) {
+
+ SEXP out = R_NilValue;
+
+ if ( (TYPEOF(ptr) == EXTPTRSXP) &&
+ (R_ExternalPtrAddr(ptr) == NULL) ) {
+ out = Rf_ScalarLogical(1);
+ }
+ else {
+ out = Rf_ScalarLogical(0);
+ }
+
+ return out;
+}
+
+
+/* -------------------------------------------------------------------------- */
+/* API-Functions */
+/* -------------------------------------------------------------------------- */
+
+/* -------------------------------------------------------------------------- */
+/* initialize clp */
+SEXP initCLP(void) {
+ tagCLPprob = Rf_install("TYPE_CLP_PROB");
+ return R_NilValue;
+}
+
+
+/* -------------------------------------------------------------------------- */
+/* remove problem object */
+SEXP delProb(SEXP lp) {
+
+ SEXP out = R_NilValue;
+ Clp_Simplex *del = NULL;
+
+ checkTypeOfProb(lp);
+
+ del = R_ExternalPtrAddr(lp);
+
+ Clp_deleteModel(del);
+ R_ClearExternalPtr(lp);
+
+ return out;
+}
+
+
+/* -------------------------------------------------------------------------- */
+/* create new problem object */
+SEXP initProb(SEXP ptrtype) {
+
+ SEXP lpext = R_NilValue;
+ SEXP ptr, class;
+
+ Clp_Simplex *lp;
+
+ /* create problem pointer */
+ PROTECT(ptr = Rf_allocVector(STRSXP, 1));
+ SET_STRING_ELT(ptr, 0, STRING_ELT(ptrtype, 0));
+
+ PROTECT(class = Rf_allocVector(STRSXP, 1));
+ SET_STRING_ELT(class, 0, Rf_mkChar("clp_ptr"));
+
+ lp = Clp_newModel();
+
+ lpext = R_MakeExternalPtr(lp, tagCLPprob, R_NilValue);
+ PROTECT(lpext);
+ R_RegisterCFinalizerEx(lpext, clpProbFinalizer, TRUE);
+ Rf_setAttrib(ptr, class, lpext);
+ Rf_classgets(ptr, class);
+ UNPROTECT(3);
+
+ return ptr;
+}
+
+
+/* -------------------------------------------------------------------------- */
+/* set optimization direction */
+SEXP setObjDir(SEXP lp, SEXP dir) {
+
+ SEXP out = R_NilValue;
+
+ checkProb(lp);
+
+ Clp_setOptimizationDirection(R_ExternalPtrAddr(lp), Rf_asReal(dir));
+
+ return out;
+}
+
+
+/* -------------------------------------------------------------------------- */
+/* get optimization direction */
+SEXP getObjDir(SEXP lp) {
+
+ SEXP out = R_NilValue;
+ double dir = 0;
+
+ checkProb(lp);
+
+ dir = Clp_optimizationDirection(R_ExternalPtrAddr(lp));
+
+ out = Rf_ScalarReal(dir);
+
+ return out;
+}
+
+
+/* -------------------------------------------------------------------------- */
+/* resize the model */
+SEXP resize(SEXP lp, SEXP nrows, SEXP ncols) {
+
+ SEXP out = R_NilValue;
+
+ checkProb(lp);
+
+ Clp_resize(R_ExternalPtrAddr(lp), Rf_asInteger(nrows), Rf_asInteger(ncols));
+
+ return out;
+}
+
+
+/* -------------------------------------------------------------------------- */
+/* add rows */
+SEXP addRows(SEXP lp, SEXP nrows,
+ SEXP lb, SEXP ub, SEXP rowst, SEXP cols, SEXP val) {
+
+ SEXP out = R_NilValue;
+
+ const double *rlb = REAL(lb);
+ const double *rub = REAL(ub);
+ const int *rrowst = INTEGER(rowst);
+ const int *rcols = INTEGER(cols);
+ const double *rval = REAL(val);
+
+ checkProb(lp);
+
+ Clp_addRows(R_ExternalPtrAddr(lp), Rf_asInteger(nrows),
+ rlb, rub, rrowst, rcols, rval);
+
+ return out;
+}
+
+
+/* -------------------------------------------------------------------------- */
+/* add columns */
+SEXP addCols(SEXP lp, SEXP ncols,
+ SEXP lb, SEXP ub, SEXP obj, SEXP colst, SEXP rows, SEXP val) {
+
+ SEXP out = R_NilValue;
+
+ const double *rlb = REAL(lb);
+ const double *rub = REAL(ub);
+ const double *robj = REAL(obj);
+ const int *rcolst = INTEGER(colst);
+ const int *rrows = INTEGER(rows);
+ const double *rval = REAL(val);
+
+ checkProb(lp);
+
+ Clp_addColumns(R_ExternalPtrAddr(lp), Rf_asInteger(ncols),
+ rlb, rub, robj, rcolst, rrows, rval);
+
+ return out;
+}
+
+
+/* -------------------------------------------------------------------------- */
+/* get number of rows */
+SEXP getNumRows(SEXP lp) {
+
+ SEXP out = R_NilValue;
+ int nrows = 0;
+
+ checkProb(lp);
+
+ nrows = Clp_numberRows(R_ExternalPtrAddr(lp));
+
+ out = Rf_ScalarInteger(nrows);
+
+ return out;
+}
+
+
+/* -------------------------------------------------------------------------- */
+/* get number of columns */
+SEXP getNumCols(SEXP lp) {
+
+ SEXP out = R_NilValue;
+ int ncols = 0;
+
+ checkProb(lp);
+
+ ncols = Clp_numberColumns(R_ExternalPtrAddr(lp));
+
+ out = Rf_ScalarInteger(ncols);
+
+ return out;
+}
+
+
+/* -------------------------------------------------------------------------- */
+/* set objective coefficients */
+SEXP chgObjCoefs(SEXP lp, SEXP objCoef) {
+
+ SEXP out = R_NilValue;
+
+ checkProb(lp);
+
+ Clp_chgObjCoefficients(R_ExternalPtrAddr(lp), REAL(objCoef));
+
+ return out;
+}
+
+
+/* -------------------------------------------------------------------------- */
+/* get objective coefficients */
+SEXP getObjCoefs(SEXP lp) {
+
+ SEXP out = R_NilValue;
+
+ int ncols, k;
+ double *obj_coef;
+
+ checkProb(lp);
+
+ ncols = Clp_numberColumns(R_ExternalPtrAddr(lp));
+ obj_coef = Clp_objective(R_ExternalPtrAddr(lp));
+
+ PROTECT(out = Rf_allocVector(REALSXP, ncols));
+ for (k = 0; k < ncols; k++) {
+ REAL(out)[k] = obj_coef[k];
+ }
+ UNPROTECT(1);
+
+ return out;
+}
+
+
+/* -------------------------------------------------------------------------- */
+/* change row lower bounds */
+SEXP chgRowLower(SEXP lp, SEXP rlb) {
+
+ SEXP out = R_NilValue;
+
+ checkProb(lp);
+
+ Clp_chgRowLower(R_ExternalPtrAddr(lp), REAL(rlb));
+
+ return out;
+}
+
+
+/* -------------------------------------------------------------------------- */
+/* get row lower bounds */
+SEXP getRowLower(SEXP lp) {
+
+ SEXP out = R_NilValue;
+
+ int nrows, k;
+ double *rlb;
+
+ checkProb(lp);
+
+ nrows = Clp_numberRows(R_ExternalPtrAddr(lp));
+ rlb = Clp_rowLower(R_ExternalPtrAddr(lp));
+
+ PROTECT(out = Rf_allocVector(REALSXP, nrows));
+ for (k = 0; k < nrows; k++) {
+ REAL(out)[k] = rlb[k];
+ }
+ UNPROTECT(1);
+
+ return out;
+}
+
+
+/* -------------------------------------------------------------------------- */
+/* change row upper bounds */
+SEXP chgRowUpper(SEXP lp, SEXP rub) {
+
+ SEXP out = R_NilValue;
+
+ checkProb(lp);
+
+ Clp_chgRowUpper(R_ExternalPtrAddr(lp), REAL(rub));
+
+ return out;
+}
+
+
+/* -------------------------------------------------------------------------- */
+/* get row upper bounds */
+SEXP getRowUpper(SEXP lp) {
+
+ SEXP out = R_NilValue;
+
+ int nrows, k;
+ double *rub;
+
+ checkProb(lp);
+
+ nrows = Clp_numberRows(R_ExternalPtrAddr(lp));
+ rub = Clp_rowUpper(R_ExternalPtrAddr(lp));
+
+ PROTECT(out = Rf_allocVector(REALSXP, nrows));
+ for (k = 0; k < nrows; k++) {
+ REAL(out)[k] = rub[k];
+ }
+ UNPROTECT(1);
+
+ return out;
+}
+
+
+/* -------------------------------------------------------------------------- */
+/* change column lower bounds */
+SEXP chgColLower(SEXP lp, SEXP lb) {
+
+ SEXP out = R_NilValue;
+
+ checkProb(lp);
+
+ Clp_chgColumnLower(R_ExternalPtrAddr(lp), REAL(lb));
+
+ return out;
+}
+
+
+/* -------------------------------------------------------------------------- */
+/* get column lower bounds */
+SEXP getColLower(SEXP lp) {
+
+ SEXP out = R_NilValue;
+
+ int ncols, k;
+ double *lb;
+
+ checkProb(lp);
+
+ ncols = Clp_numberColumns(R_ExternalPtrAddr(lp));
+ lb = Clp_columnLower(R_ExternalPtrAddr(lp));
+
+ PROTECT(out = Rf_allocVector(REALSXP, ncols));
+ for (k = 0; k < ncols; k++) {
+ REAL(out)[k] = lb[k];
+ }
+ UNPROTECT(1);
+
+ return out;
+}
+
+
+/* -------------------------------------------------------------------------- */
+/* change column upper bounds */
+SEXP chgColUpper(SEXP lp, SEXP ub) {
+
+ SEXP out = R_NilValue;
+
+ checkProb(lp);
+
+ Clp_chgColumnUpper(R_ExternalPtrAddr(lp), REAL(ub));
+
+ return out;
+}
+
+
+/* -------------------------------------------------------------------------- */
+/* get column upper bounds */
+SEXP getColUpper(SEXP lp) {
+
+ SEXP out = R_NilValue;
+
+ int ncols, k;
+ double *ub;
+
+ checkProb(lp);
+
+ ncols = Clp_numberColumns(R_ExternalPtrAddr(lp));
+ ub = Clp_columnUpper(R_ExternalPtrAddr(lp));
+
+ PROTECT(out = Rf_allocVector(REALSXP, ncols));
+ for (k = 0; k < ncols; k++) {
+ REAL(out)[k] = ub[k];
+ }
+ UNPROTECT(1);
+
+ return out;
+}
+
+
+/* -------------------------------------------------------------------------- */
+/* load a complete Problem or at least the constraint matrix */
+SEXP loadProblem(SEXP lp, SEXP ncols, SEXP nrows, SEXP ia, SEXP ja, SEXP ra,
+ SEXP clb, SEXP cub, SEXP obj_coef, SEXP rlb, SEXP rub) {
+
+ SEXP out = R_NilValue;
+
+ int *ria = INTEGER(ia);
+ /* int *rja = INTEGER(ja); */
+ CoinBigIndex *rja = INTEGER(ja);
+ double *rra = REAL(ra);
+ double *rclb;
+ double *rcub;
+ double *robj_coef;
+ double *rrlb;
+ double *rrub;
+/* double *rclb = REAL(clb); */
+/* double *rcub = REAL(cub); */
+/* double *robj_coef = REAL(obj_coef); */
+/* double *rrlb = REAL(rlb); */
+/* double *rrub = REAL(rub); */
+
+ checkProb(lp);
+
+ if (clb == R_NilValue) {
+ rclb = NULL;
+ }
+ else {
+ rclb = REAL(clb);
+ }
+
+ if (cub == R_NilValue) {
+ rcub = NULL;
+ }
+ else {
+ rcub = REAL(cub);
+ }
+
+ if (obj_coef == R_NilValue) {
+ robj_coef = NULL;
+ }
+ else {
+ robj_coef = REAL(obj_coef);
+ }
+
+ if (rlb == R_NilValue) {
+ rrlb = NULL;
+ }
+ else {
+ rrlb = REAL(rlb);
+ }
+
+ if (rub == R_NilValue) {
+ rrub = NULL;
+ }
+ else {
+ rrub = REAL(rub);
+ }
+
+ Clp_loadProblem(R_ExternalPtrAddr(lp), Rf_asInteger(ncols),
+ Rf_asInteger(nrows), rja, ria, rra, rclb, rcub,
+ robj_coef, rrlb, rrub
+ );
+
+ return out;
+}
+
+
+/* -------------------------------------------------------------------------- */
+/* load a complete Problem or at least the constraint matrix */
+SEXP loadMatrix(SEXP lp, SEXP ncols, SEXP nrows, SEXP ia, SEXP ja, SEXP ra) {
+
+ SEXP out = R_NilValue;
+
+ int *ria = INTEGER(ia);
+ /* int *rja = INTEGER(ja); */
+ CoinBigIndex *rja = INTEGER(ja);
+ double *rra = REAL(ra);
+
+ checkProb(lp);
+
+ Clp_loadProblem(R_ExternalPtrAddr(lp),
+ Rf_asInteger(ncols), Rf_asInteger(nrows),
+ rja, ria, rra, NULL, NULL, NULL, NULL, NULL
+ );
+
+ return out;
+}
+
+
+/* -------------------------------------------------------------------------- */
+/* get number of non zero elements in the contraint matrix */
+SEXP getNumNnz(SEXP lp) {
+
+ SEXP out = R_NilValue;
+ int nnz;
+
+ checkProb(lp);
+
+ nnz = Clp_getNumElements(R_ExternalPtrAddr(lp));
+
+ out = Rf_ScalarInteger(nnz);
+
+ return out;
+}
+
+
+/* -------------------------------------------------------------------------- */
+/* Column starts in constraint matrix (ja(-a) in column major order format) */
+SEXP getVecStart(SEXP lp) {
+
+ SEXP out = R_NilValue;
+
+ int ncols, k;
+ /* const int *vec_start; */
+ const CoinBigIndex *vec_start;
+
+ checkProb(lp);
+
+ ncols = Clp_numberColumns(R_ExternalPtrAddr(lp)) + 1;
+ vec_start = Clp_getVectorStarts(R_ExternalPtrAddr(lp));
+
+ PROTECT(out = Rf_allocVector(INTSXP, ncols));
+ for (k = 0; k < ncols; k++) {
+ INTEGER(out)[k] = vec_start[k];
+ }
+ UNPROTECT(1);
+
+ return out;
+}
+
+
+/* -------------------------------------------------------------------------- */
+/* Row indices in the constraint matrix (ia(-1) in column major order format) */
+SEXP getInd(SEXP lp) {
+
+ SEXP out = R_NilValue;
+
+ int nnz, k;
+ const int *index;
+
+ checkProb(lp);
+
+ nnz = Clp_getNumElements(R_ExternalPtrAddr(lp));
+ index = Clp_getIndices(R_ExternalPtrAddr(lp));
+
+ PROTECT(out = Rf_allocVector(INTSXP, nnz));
+ for (k = 0; k < nnz; k++) {
+ INTEGER(out)[k] = index[k];
+ }
+ UNPROTECT(1);
+
+ return out;
+}
+
+
+/* -------------------------------------------------------------------------- */
+/* Vector (number of nnz per column) length in the constraint matrix
+ (lg in column major order format) */
+SEXP getVecLen(SEXP lp) {
+
+ SEXP out = R_NilValue;
+
+ int ncols, k;
+ const int *vec_len;
+
+ checkProb(lp);
+
+ ncols = Clp_numberColumns(R_ExternalPtrAddr(lp));
+ vec_len = Clp_getVectorLengths(R_ExternalPtrAddr(lp));
+
+ PROTECT(out = Rf_allocVector(INTSXP, ncols));
+ for (k = 0; k < ncols; k++) {
+ INTEGER(out)[k] = vec_len[k];
+ }
+ UNPROTECT(1);
+
+ return out;
+}
+
+
+/* -------------------------------------------------------------------------- */
+/* Non zero elements in the constraint matrix (ar in column major format) */
+SEXP getNnz(SEXP lp) {
+
+ SEXP out = R_NilValue;
+
+ int nnz, k;
+ const double *n_elem;
+
+ checkProb(lp);
+
+ nnz = Clp_getNumElements(R_ExternalPtrAddr(lp));
+ n_elem = Clp_getElements(R_ExternalPtrAddr(lp));
+
+ PROTECT(out = Rf_allocVector(REALSXP, nnz));
+ for (k = 0; k < nnz; k++) {
+ REAL(out)[k] = n_elem[k];
+ }
+ UNPROTECT(1);
+
+ return out;
+}
+
+
+/* -------------------------------------------------------------------------- */
+/* print model */
+SEXP printModel(SEXP lp, SEXP prefix) {
+
+ SEXP out = R_NilValue;
+ const char *rprefix = CHAR(STRING_ELT(prefix, 0));
+
+ checkProb(lp);
+
+ Clp_printModel(R_ExternalPtrAddr(lp), rprefix);
+ /* Clp_printModel(R_ExternalPtrAddr(lp), "CLPmodel"); */
+
+ return out;
+}
+
+
+/* -------------------------------------------------------------------------- */
+/* amount of print out */
+SEXP setLogLevel(SEXP lp, SEXP amount) {
+
+ SEXP out = R_NilValue;
+
+ checkProb(lp);
+
+ Clp_setLogLevel(R_ExternalPtrAddr(lp), Rf_asInteger(amount));
+
+ return out;
+}
+
+
+/* -------------------------------------------------------------------------- */
+/* get log level */
+SEXP getLogLevel(SEXP lp) {
+
+ SEXP out = R_NilValue;
+ int amount;
+
+ checkProb(lp);
+
+ amount = Clp_logLevel(R_ExternalPtrAddr(lp));
+
+ out = Rf_ScalarInteger(amount);
+
+ return out;
+}
+
+
+/* -------------------------------------------------------------------------- */
+/* set or unset scaling */
+SEXP scaleModel(SEXP lp, SEXP mode) {
+
+ SEXP out = R_NilValue;
+
+ checkProb(lp);
+
+ Clp_scaling(R_ExternalPtrAddr(lp), Rf_asInteger(mode));
+
+ return out;
+}
+
+
+/* -------------------------------------------------------------------------- */
+/* get scale flag */
+SEXP getScaleFlag(SEXP lp) {
+
+ SEXP out = R_NilValue;
+ int flag;
+
+ checkProb(lp);
+
+ flag = Clp_scalingFlag(R_ExternalPtrAddr(lp));
+
+ out = Rf_ScalarInteger(flag);
+
+ return out;
+}
+
+
+/* -------------------------------------------------------------------------- */
+/* solve model with general solve algorithm */
+SEXP solveInitial(SEXP lp) {
+
+ SEXP out = R_NilValue;
+ int ret;
+
+ checkProb(lp);
+
+ ret = Clp_initialSolve(R_ExternalPtrAddr(lp));
+
+ out = Rf_ScalarInteger(ret);
+
+ return out;
+}
+
+
+/* -------------------------------------------------------------------------- */
+/* Dual initial solve */
+SEXP solveInitialDual(SEXP lp) {
+
+ SEXP out = R_NilValue;
+ int ret;
+
+ checkProb(lp);
+
+ ret = Clp_initialDualSolve(R_ExternalPtrAddr(lp));
+
+ out = Rf_ScalarInteger(ret);
+
+ return out;
+}
+
+
+/* -------------------------------------------------------------------------- */
+/* Primal initial solve */
+SEXP solveInitialPrimal(SEXP lp) {
+
+ SEXP out = R_NilValue;
+ int ret;
+
+ checkProb(lp);
+
+ ret = Clp_initialPrimalSolve(R_ExternalPtrAddr(lp));
+
+ out = Rf_ScalarInteger(ret);
+
+ return out;
+}
+
+
+/* -------------------------------------------------------------------------- */
+/* Barrier initial solve */
+SEXP solveInitialBarrier(SEXP lp) {
+
+ SEXP out = R_NilValue;
+ int ret;
+
+ checkProb(lp);
+
+ ret = Clp_initialBarrierSolve(R_ExternalPtrAddr(lp));
+
+ out = Rf_ScalarInteger(ret);
+
+ return out;
+}
+
+
+/* -------------------------------------------------------------------------- */
+/* Barrier initial solve, no crossover */
+SEXP solveInitialBarrierNoCross(SEXP lp) {
+
+ SEXP out = R_NilValue;
+ int ret;
+
+ checkProb(lp);
+
+ ret = Clp_initialBarrierNoCrossSolve(R_ExternalPtrAddr(lp));
+
+ out = Rf_ScalarInteger(ret);
+
+ return out;
+}
+
+
+/* -------------------------------------------------------------------------- */
+/* Dual slgorithm */
+SEXP dual(SEXP lp, SEXP ifValP) {
+
+ SEXP out = R_NilValue;
+ int ret;
+
+ checkProb(lp);
+
+ ret = Clp_dual(R_ExternalPtrAddr(lp), Rf_asInteger(ifValP));
+
+ out = Rf_ScalarInteger(ret);
+
+ return out;
+}
+
+
+/* -------------------------------------------------------------------------- */
+/* Dual slgorithm */
+SEXP primal(SEXP lp, SEXP ifValP) {
+
+ SEXP out = R_NilValue;
+ int ret;
+
+ checkProb(lp);
+
+ ret = Clp_primal(R_ExternalPtrAddr(lp), Rf_asInteger(ifValP));
+
+ out = Rf_ScalarInteger(ret);
+
+ return out;
+}
+
+
+/* -------------------------------------------------------------------------- */
+/* solve problem using the idiot code */
+SEXP idiot(SEXP lp, SEXP thd) {
+
+ SEXP out = R_NilValue;
+
+ checkProb(lp);
+
+ Clp_idiot(R_ExternalPtrAddr(lp), Rf_asInteger(thd));
+
+ return out;
+}
+
+
+/* -------------------------------------------------------------------------- */
+/* get solution status */
+SEXP getSolStatus(SEXP lp) {
+
+ SEXP out = R_NilValue;
+ int stat;
+
+ checkProb(lp);
+
+ stat = Clp_status(R_ExternalPtrAddr(lp));
+
+ out = Rf_ScalarInteger(stat);
+
+ return out;
+}
+
+
+/* -------------------------------------------------------------------------- */
+/* solve model with general solve algorithm */
+SEXP getObjVal(SEXP lp) {
+
+ SEXP out = R_NilValue;
+ double obj;
+
+ checkProb(lp);
+
+ obj = Clp_objectiveValue(R_ExternalPtrAddr(lp));
+
+ out = Rf_ScalarReal(obj);
+
+ return out;
+}
+
+
+/* -------------------------------------------------------------------------- */
+/* get column primal solution */
+SEXP getColPrim(SEXP lp) {
+
+ SEXP out = R_NilValue;
+
+ int ncols, k;
+ double *col_prim;
+
+ checkProb(lp);
+
+ ncols = Clp_numberColumns(R_ExternalPtrAddr(lp));
+ col_prim = Clp_primalColumnSolution(R_ExternalPtrAddr(lp));
+
+ PROTECT(out = Rf_allocVector(REALSXP, ncols));
+ for (k = 0; k < ncols; k++) {
+ REAL(out)[k] = col_prim[k];
+ }
+ UNPROTECT(1);
+
+ return out;
+}
+
+
+/* -------------------------------------------------------------------------- */
+/* get column dual solution */
+SEXP getColDual(SEXP lp) {
+
+ SEXP out = R_NilValue;
+
+ int ncols, k;
+ double *col_dual;
+
+ checkProb(lp);
+
+ ncols = Clp_numberColumns(R_ExternalPtrAddr(lp));
+ col_dual = Clp_dualColumnSolution(R_ExternalPtrAddr(lp));
+
+ PROTECT(out = Rf_allocVector(REALSXP, ncols));
+ for (k = 0; k < ncols; k++) {
+ REAL(out)[k] = col_dual[k];
+ }
+ UNPROTECT(1);
+
+ return out;
+}
+
+
+/* -------------------------------------------------------------------------- */
+/* get row primal solution */
+SEXP getRowPrim(SEXP lp) {
+
+ SEXP out = R_NilValue;
+
+ int nrows, k;
+ double *row_prim;
+
+ checkProb(lp);
+
+ nrows = Clp_numberRows(R_ExternalPtrAddr(lp));
+ row_prim = Clp_primalRowSolution(R_ExternalPtrAddr(lp));
+
+ PROTECT(out = Rf_allocVector(REALSXP, nrows));
+ for (k = 0; k < nrows; k++) {
+ REAL(out)[k] = row_prim[k];
+ }
+ UNPROTECT(1);
+
+ return out;
+}
+
+
+/* -------------------------------------------------------------------------- */
+/* get row dual solution */
+SEXP getRowDual(SEXP lp) {
+
+ SEXP out = R_NilValue;
+
+ int nrows, k;
+ double *row_dual;
+
+ checkProb(lp);
+
+ nrows = Clp_numberRows(R_ExternalPtrAddr(lp));
+ row_dual = Clp_dualRowSolution(R_ExternalPtrAddr(lp));
+
+ PROTECT(out = Rf_allocVector(REALSXP, nrows));
+ for (k = 0; k < nrows; k++) {
+ REAL(out)[k] = row_dual[k];
+ }
+ UNPROTECT(1);
+
+ return out;
+}
+
+
+/* -------------------------------------------------------------------------- */
+/* delete rows */
+SEXP delRows(SEXP lp, SEXP num, SEXP i) {
+
+ SEXP out = R_NilValue;
+
+ checkProb(lp);
+
+ Clp_deleteRows(R_ExternalPtrAddr(lp), Rf_asInteger(num), INTEGER(i));
+
+ return out;
+}
+
+
+/* -------------------------------------------------------------------------- */
+/* delete columns */
+SEXP delCols(SEXP lp, SEXP num, SEXP j) {
+
+ SEXP out = R_NilValue;
+
+ checkProb(lp);
+
+ Clp_deleteColumns(R_ExternalPtrAddr(lp), Rf_asInteger(num), INTEGER(j));
+
+ return out;
+}
+
+
+/* -------------------------------------------------------------------------- */
+/* read problem data in MPS format */
+SEXP readMPS(SEXP lp, SEXP fname, SEXP keepNames, SEXP ignoreErrors) {
+
+ SEXP out = R_NilValue;
+ const char *rfname = CHAR(STRING_ELT(fname, 0));
+ int check = 0;
+
+ checkProb(lp);
+
+ check = Clp_readMps(R_ExternalPtrAddr(lp), rfname, Rf_asInteger(keepNames),
+ Rf_asInteger(ignoreErrors)
+ );
+
+ out = Rf_ScalarInteger(check);
+
+ return out;
+}
+
+
+/* -------------------------------------------------------------------------- */
+/* save model to file */
+SEXP saveModel(SEXP lp, SEXP fname) {
+
+ SEXP out = R_NilValue;
+ const char *rfname = CHAR(STRING_ELT(fname, 0));
+ int check = 0;
+
+ checkProb(lp);
+
+ check = Clp_saveModel(R_ExternalPtrAddr(lp), rfname);
+
+ out = Rf_ScalarInteger(check);
+
+ return out;
+}
+
+
+/* -------------------------------------------------------------------------- */
+/* restore model from file */
+SEXP restoreModel(SEXP lp, SEXP fname) {
+
+ SEXP out = R_NilValue;
+ const char *rfname = CHAR(STRING_ELT(fname, 0));
+ int check = 0;
+
+ checkProb(lp);
+
+ check = Clp_restoreModel(R_ExternalPtrAddr(lp), rfname);
+
+ out = Rf_ScalarInteger(check);
+
+ return out;
+}
+
+
+/* -------------------------------------------------------------------------- */
+/* get COIN OR Clp version */
+SEXP version() {
+
+ SEXP out = R_NilValue;
+
+ out = Rf_mkString(CLP_VERSION);
+
+ return out;
+}
+
+
+/* -------------------------------------------------------------------------- */
+/* drop names */
+SEXP dropNames(SEXP lp) {
+
+ SEXP out = R_NilValue;
+
+ checkProb(lp);
+
+ Clp_dropNames(R_ExternalPtrAddr(lp));
+
+ return out;
+}
+
+
+/* -------------------------------------------------------------------------- */
+/* copy in names */
+SEXP copyNames(SEXP lp, SEXP cnames, SEXP rnames) {
+
+ SEXP out = R_NilValue;
+
+ int k, numcn, numrn;
+ const char **rcnames;
+ const char ** rrnames;
+
+ checkProb(lp);
+
+ numcn = Rf_length(cnames);
+ rcnames = R_Calloc(numcn, const char *);
+ for (k = 0; k < numcn; k++) {
+ rcnames[k] = CHAR(STRING_ELT(cnames, k));
+ }
+
+ numrn = Rf_length(rnames);
+ rrnames = R_Calloc(numrn, const char *);
+ for (k = 0; k < numrn; k++) {
+ rrnames[k] = CHAR(STRING_ELT(rnames, k));
+ }
+
+ Clp_copyNames(R_ExternalPtrAddr(lp), rrnames, rcnames);
+
+ if (cnames != R_NilValue) {
+ R_Free(rcnames);
+ }
+ if (rnames != R_NilValue) {
+ R_Free(rrnames);
+ }
+
+ return out;
+}
+
+
+/* -------------------------------------------------------------------------- */
+/* length of names */
+SEXP lengthNames(SEXP lp) {
+
+ SEXP out = R_NilValue;
+ int ncnames;
+
+ checkProb(lp);
+
+ ncnames = Clp_lengthNames(R_ExternalPtrAddr(lp));
+
+ out = Rf_ScalarInteger(ncnames);
+
+ return out;
+}
+
+
+/* -------------------------------------------------------------------------- */
+/* fill in row name */
+SEXP rowName(SEXP lp, SEXP i, SEXP rname) {
+
+ SEXP out = R_NilValue;
+
+ const char *rrname = CHAR(STRING_ELT(rname, 0));
+
+ checkProb(lp);
+
+ Clp_rowName(R_ExternalPtrAddr(lp), Rf_asInteger(i), (char *) rrname);
+
+ return out;
+}
+
+
+/* -------------------------------------------------------------------------- */
+/* fill in column name */
+SEXP colName(SEXP lp, SEXP j, SEXP cname) {
+
+ SEXP out = R_NilValue;
+
+ const char *rcname = CHAR(STRING_ELT(cname, 0));
+
+ checkProb(lp);
+
+ Clp_columnName(R_ExternalPtrAddr(lp), Rf_asInteger(j), (char *) rcname);
+
+ return out;
+}
+
+
+/* -------------------------------------------------------------------------- */
+/* fill in problem name */
+SEXP probName(SEXP lp, SEXP nc, SEXP pname) {
+
+ SEXP out = R_NilValue;
+
+ const char *rpname = CHAR(STRING_ELT(pname, 0));
+
+ checkProb(lp);
+
+ Clp_problemName(R_ExternalPtrAddr(lp), Rf_asInteger(nc), (char *) rpname);
+
+ return out;
+}
diff --git a/src/clpAPI.h b/src/clpAPI.h
new file mode 100644
index 0000000000000000000000000000000000000000..043c1cb39410a00e7eddf77269cc798b5e73bdd0
--- /dev/null
+++ b/src/clpAPI.h
@@ -0,0 +1,221 @@
+/* clpAPI.h
+ R interface to COIN-OR Clp.
+
+ Copyright (C) 2011-2013 Gabriel Gelius-Dietrich, Dpt. for Bioinformatics,
+ Institute for Informatics, Heinrich-Heine-University, Duesseldorf, Germany.
+ All right reserved.
+ Email: geliudie@uni-duesseldorf.de
+
+ This file is part of clpAPI.
+
+ ClpAPI is free software: you can redistribute it and/or modify
+ it under the terms of the GNU General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ ClpAPI is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU General Public License for more details.
+
+ You should have received a copy of the GNU General Public License
+ along with clpAPI. If not, see <http://www.gnu.org/licenses/>.
+*/
+
+
+#include "clpR.h"
+
+
+/* -------------------------------------------------------------------------- */
+/* help functions */
+/* -------------------------------------------------------------------------- */
+
+/* check for pointer to clp */
+SEXP isCLPptr(SEXP ptr);
+
+/* check for NULL pointer */
+SEXP isNULLptr(SEXP ptr);
+
+
+/* -------------------------------------------------------------------------- */
+/* API functions */
+/* -------------------------------------------------------------------------- */
+
+/* initialize clp */
+SEXP initCLP(void);
+
+/* remove problem object */
+SEXP delProb(SEXP lp);
+
+/* create new problem object */
+SEXP initProb(SEXP ptrtype);
+
+/* set optimization direction */
+SEXP setObjDir(SEXP lp, SEXP dir);
+
+/* get optimization direction */
+SEXP getObjDir(SEXP lp);
+
+/* resize the model */
+SEXP resize(SEXP lp, SEXP nrows, SEXP ncols);
+
+/* add rows */
+SEXP addRows(SEXP lp, SEXP nrows,
+ SEXP lb, SEXP ub, SEXP rowst, SEXP cols, SEXP val);
+
+/* add columns */
+SEXP addCols(SEXP lp, SEXP ncols,
+ SEXP lb, SEXP ub, SEXP obj, SEXP colst, SEXP rows, SEXP val);
+
+/* get number of rows */
+SEXP getNumRows(SEXP lp);
+
+/* get number of columns */
+SEXP getNumCols(SEXP lp);
+
+/* set objective coefficients */
+SEXP chgObjCoefs(SEXP lp, SEXP objCoef);
+
+/* get objective coefficients */
+SEXP getObjCoefs(SEXP lp);
+
+/* change row lower bounds */
+SEXP chgRowLower(SEXP lp, SEXP rlb);
+
+/* get row lower bounds */
+SEXP getRowLower(SEXP lp);
+
+/* change row upper bounds */
+SEXP chgRowUpper(SEXP lp, SEXP rub);
+
+/* get row upper bounds */
+SEXP getRowUpper(SEXP lp);
+
+/* change column lower bounds */
+SEXP chgColLower(SEXP lp, SEXP lb);
+
+/* get column lower bounds */
+SEXP getColLower(SEXP lp);
+
+/* change column upper bounds */
+SEXP chgColUpper(SEXP lp, SEXP ub);
+
+/* get column upper bounds */
+SEXP getColUpper(SEXP lp);
+
+/* load a complete Problem or at least the constraint matrix */
+SEXP loadProblem(SEXP lp, SEXP ncols, SEXP nrows, SEXP ia, SEXP ja, SEXP ra,
+ SEXP clb, SEXP cub, SEXP obj_coef, SEXP rlb, SEXP rub);
+
+/* load a complete Problem or at least the constraint matrix */
+SEXP loadMatrix(SEXP lp, SEXP ncols, SEXP nrows, SEXP ia, SEXP ja, SEXP ra);
+
+/* get number of non zero elements in the contraint matrix */
+SEXP getNumNnz(SEXP lp);
+
+/* Column starts in constraint matrix (ja(-a) in column major order format) */
+SEXP getVecStart(SEXP lp);
+
+/* Row indices in the constraint matrix (ia(-1) in column major order format) */
+SEXP getInd(SEXP lp);
+
+/* Vector (number of nnz per column) length in the constraint matrix
+ (lg in column major order format) */
+SEXP getVecLen(SEXP lp);
+
+/* Non zero elements in the constraint matrix (ar in column major format) */
+SEXP getNnz(SEXP lp);
+
+/* print model */
+SEXP printModel(SEXP lp, SEXP prefix);
+
+/* amount of print out */
+SEXP setLogLevel(SEXP lp, SEXP amount);
+
+/* get log level */
+SEXP getLogLevel(SEXP lp);
+
+/* set or unset scaling */
+SEXP scaleModel(SEXP lp, SEXP mode);
+
+/* get scale flag */
+SEXP getScaleFlag(SEXP lp);
+
+/* solve model with general solve algorithm */
+SEXP solveInitial(SEXP lp);
+
+/* Dual initial solve */
+SEXP solveInitialDual(SEXP lp);
+
+/* Primal initial solve */
+SEXP solveInitialPrimal(SEXP lp);
+
+/* Barrier initial solve */
+SEXP solveInitialBarrier(SEXP lp);
+
+/* Barrier initial solve, no crossover */
+SEXP solveInitialBarrierNoCross(SEXP lp);
+
+/* Dual slgorithm */
+SEXP dual(SEXP lp, SEXP ifValP);
+
+/* Dual slgorithm */
+SEXP primal(SEXP lp, SEXP ifValP);
+
+/* solve problem using the idiot code */
+SEXP idiot(SEXP lp, SEXP thd);
+
+/* get solution status */
+SEXP getSolStatus(SEXP lp);
+
+/* solve model with general solve algorithm */
+SEXP getObjVal(SEXP lp);
+
+/* get column primal solution */
+SEXP getColPrim(SEXP lp);
+
+/* get column dual solution */
+SEXP getColDual(SEXP lp);
+
+/* get row primal solution */
+SEXP getRowPrim(SEXP lp);
+
+/* get row dual solution */
+SEXP getRowDual(SEXP lp);
+
+/* delete rows */
+SEXP delRows(SEXP lp, SEXP num, SEXP i);
+
+/* delete columns */
+SEXP delCols(SEXP lp, SEXP num, SEXP j);
+
+/* read problem data in MPS format */
+SEXP readMPS(SEXP lp, SEXP fname, SEXP keepNames, SEXP ignoreErrors);
+
+/* save model to file */
+SEXP saveModel(SEXP lp, SEXP fname);
+
+/* restore model from file */
+SEXP restoreModel(SEXP lp, SEXP fname);
+
+/* get COIN OR Clp version */
+SEXP version();
+
+/* drop names */
+SEXP dropNames(SEXP lp);
+
+/* copy in names */
+SEXP copyNames(SEXP lp, SEXP cnames, SEXP rnames);
+
+/* length of names */
+SEXP lengthNames(SEXP lp);
+
+/* fill in row name */
+SEXP rowName(SEXP lp, SEXP i, SEXP rname);
+
+/* fill in column name */
+SEXP colName(SEXP lp, SEXP j, SEXP cname);
+
+/* fill in problem name */
+SEXP probName(SEXP lp, SEXP nc, SEXP pname);
+
diff --git a/src/clpR.h b/src/clpR.h
new file mode 100644
index 0000000000000000000000000000000000000000..5e61acfae9b5bd153ba9ec2fe1ba26b087a74e76
--- /dev/null
+++ b/src/clpR.h
@@ -0,0 +1,65 @@
+/* clpR.h
+ R interface to COIN-OR Clp.
+
+ Copyright (C) 2011-2013 Gabriel Gelius-Dietrich, Dpt. for Bioinformatics,
+ Institute for Informatics, Heinrich-Heine-University, Duesseldorf, Germany.
+ All right reserved.
+ Email: geliudie@uni-duesseldorf.de
+
+ This file is part of clpAPI.
+
+ ClpAPI is free software: you can redistribute it and/or modify
+ it under the terms of the GNU General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ ClpAPI is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU General Public License for more details.
+
+ You should have received a copy of the GNU General Public License
+ along with clpAPI. If not, see <http://www.gnu.org/licenses/>.
+*/
+
+
+#include <stdio.h>
+#include <stdlib.h>
+#include <Clp_C_Interface.h>
+#include <ClpConfig.h>
+
+
+/* avoid remapping of Rf_<function> to <function> in R header files */
+#ifndef R_NO_REMAP
+#define R_NO_REMAP
+#endif /* R_NO_REMAP */
+
+/* use strict R headers */
+#ifndef STRICT_R_HEADERS
+#define STRICT_R_HEADERS
+#endif /* STRICT_R_HEADERS */
+
+#include <R.h>
+#include <Rinternals.h>
+
+
+/* -------------------------------------------------------------------------- */
+/* NULL */
+#define checkIfNil(cp) do { \
+ if (R_ExternalPtrAddr(cp) == NULL) \
+ Rf_error("You passed a nil value!"); \
+} while (0)
+
+
+/* -------------------------------------------------------------------------- */
+/* problem */
+#define checkTypeOfProb(cp) do { \
+ if ( (TYPEOF(cp) != EXTPTRSXP) || (R_ExternalPtrTag(cp) != tagCLPprob) ) \
+ Rf_error("You must pass a clp problem!"); \
+} while (0)
+
+#define checkProb(p) do { \
+ checkIfNil(p); \
+ checkTypeOfProb(p); \
+} while (0)
+
diff --git a/src/init.c b/src/init.c
new file mode 100644
index 0000000000000000000000000000000000000000..83045757938546fa57b72076458e0c0d40b13d6c
--- /dev/null
+++ b/src/init.c
@@ -0,0 +1,100 @@
+/* init.c
+ R interface to COIN-OR Clp.
+
+ Copyright (C) 2011-2013 Gabriel Gelius-Dietrich, Dpt. for Bioinformatics,
+ Institute for Informatics, Heinrich-Heine-University, Duesseldorf, Germany.
+ All right reserved.
+ Email: geliudie@uni-duesseldorf.de
+
+ This file is part of clpAPI.
+
+ ClpAPI is free software: you can redistribute it and/or modify
+ it under the terms of the GNU General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ ClpAPI is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU General Public License for more details.
+
+ You should have received a copy of the GNU General Public License
+ along with clpAPI. If not, see <http://www.gnu.org/licenses/>.
+*/
+
+#include <R.h>
+#include <Rinternals.h>
+
+#include "clpAPI.h"
+
+#include <R_ext/Rdynload.h>
+
+static const R_CallMethodDef callMethods[] = {
+ {"isCLPptr", (DL_FUNC) &isCLPptr, 1},
+ {"isNULLptr", (DL_FUNC) &isNULLptr, 1},
+ {"initCLP", (DL_FUNC) &initCLP, 0},
+ {"delProb", (DL_FUNC) &delProb, 1},
+ {"initProb", (DL_FUNC) &initProb, 1},
+ {"setObjDir", (DL_FUNC) &setObjDir, 2},
+ {"getObjDir", (DL_FUNC) &getObjDir, 1},
+ {"resize", (DL_FUNC) &resize, 3},
+ {"addRows", (DL_FUNC) &addRows, 7},
+ {"addCols", (DL_FUNC) &addCols, 8},
+ {"getNumRows", (DL_FUNC) &getNumRows, 1},
+ {"getNumCols", (DL_FUNC) &getNumCols, 1},
+ {"chgObjCoefs", (DL_FUNC) &chgObjCoefs, 2},
+ {"getObjCoefs", (DL_FUNC) &getObjCoefs, 1},
+ {"chgRowLower", (DL_FUNC) &chgRowLower, 2},
+ {"getRowLower", (DL_FUNC) &getRowLower, 1},
+ {"chgRowUpper", (DL_FUNC) &chgRowUpper, 2},
+ {"getRowUpper", (DL_FUNC) &getRowUpper, 1},
+ {"chgColLower", (DL_FUNC) &chgColLower, 2},
+ {"getColLower", (DL_FUNC) &getColLower, 1},
+ {"chgColUpper", (DL_FUNC) &chgColUpper, 2},
+ {"getColUpper", (DL_FUNC) &getColUpper, 1},
+ {"loadProblem", (DL_FUNC) &loadProblem, 11},
+ {"loadMatrix", (DL_FUNC) &loadMatrix, 6},
+ {"getNumNnz", (DL_FUNC) &getNumNnz, 1},
+ {"getVecStart", (DL_FUNC) &getVecStart, 1},
+ {"getInd", (DL_FUNC) &getInd, 1},
+ {"getVecLen", (DL_FUNC) &getVecLen, 1},
+ {"getNnz", (DL_FUNC) &getNnz, 1},
+ {"printModel", (DL_FUNC) &printModel, 2},
+ {"setLogLevel", (DL_FUNC) &setLogLevel, 2},
+ {"getLogLevel", (DL_FUNC) &getLogLevel, 1},
+ {"scaleModel", (DL_FUNC) &scaleModel, 2},
+ {"getScaleFlag", (DL_FUNC) &getScaleFlag, 1},
+ {"solveInitial", (DL_FUNC) &solveInitial, 1},
+ {"solveInitialDual", (DL_FUNC) &solveInitialDual, 1},
+ {"solveInitialPrimal", (DL_FUNC) &solveInitialPrimal, 1},
+ {"solveInitialBarrier", (DL_FUNC) &solveInitialBarrier, 1},
+ {"solveInitialBarrierNoCross", (DL_FUNC) &solveInitialBarrierNoCross, 1},
+ {"dual", (DL_FUNC) &dual, 2},
+ {"primal", (DL_FUNC) &primal, 2},
+ {"idiot", (DL_FUNC) &idiot, 2},
+ {"getSolStatus", (DL_FUNC) &getSolStatus, 1},
+ {"getObjVal", (DL_FUNC) &getObjVal, 1},
+ {"getColPrim", (DL_FUNC) &getColPrim, 1},
+ {"getColDual", (DL_FUNC) &getColDual, 1},
+ {"getRowPrim", (DL_FUNC) &getRowPrim, 1},
+ {"getRowDual", (DL_FUNC) &getRowDual, 1},
+ {"delRows", (DL_FUNC) &delRows, 3},
+ {"delCols", (DL_FUNC) &delCols, 3},
+ {"readMPS", (DL_FUNC) &readMPS, 4},
+ {"saveModel", (DL_FUNC) &saveModel, 2},
+ {"restoreModel", (DL_FUNC) &restoreModel, 2},
+ {"version", (DL_FUNC) &version, 0},
+ {"dropNames", (DL_FUNC) &dropNames, 1},
+ {"copyNames", (DL_FUNC) ©Names, 3},
+ {"lengthNames", (DL_FUNC) &lengthNames, 1},
+ {"rowName", (DL_FUNC) &rowName, 3},
+ {"colName", (DL_FUNC) &colName, 3},
+ {"probName", (DL_FUNC) &probName, 3},
+ {NULL, NULL, 0}
+};
+
+
+void R_init_clpAPI(DllInfo *info) {
+ R_registerRoutines(info, NULL, callMethods, NULL, NULL);
+ R_useDynamicSymbols(info, FALSE);
+}
diff --git a/vignettes/clpAPI.Rnw b/vignettes/clpAPI.Rnw
new file mode 100644
index 0000000000000000000000000000000000000000..c1bf50b28847f3bc53b47e394ed157ac367438ca
--- /dev/null
+++ b/vignettes/clpAPI.Rnw
@@ -0,0 +1,183 @@
+\documentclass[a4paper,headings=small]{scrartcl}
+\usepackage[english]{babel}
+\usepackage[T1]{fontenc}
+\usepackage[latin1]{inputenc}
+\usepackage{textcomp,lmodern}
+\typearea[current]{last}
+\usepackage{fixltx2e,mparhack,mathdots}
+
+\usepackage{natbib}
+\usepackage{hyperref}
+\bibliographystyle{abbrvnat}
+
+\usepackage{microtype}
+
+
+\newcommand{\Comp}[1]{\texttt{#1}}
+
+\addtolength{\skip\footins}{0.5\baselineskip}
+
+\usepackage{fnpos}
+
+
+\hypersetup{
+ pdftitle = {clpAPI -- Quick Start},
+ pdfauthor = {Gabriel Gelius-Dietrich},
+ pdfsubject = {R Interface to C API of COIN-OR Clp},
+ pdfkeywords = {Optimization, COIN-OR Clp},
+ pdfborder = {0 0 0},
+ pdfhighlight = {/N}
+}
+
+
+\newcommand{\pkg}[1]{\emph{#1}}
+\newcommand{\pkgname}{\pkg{clpAPI}}
+\newcommand{\prgname}[1]{\textsc{#1}}
+
+
+\begin{document}
+\title{clpAPI -- Quick Start}
+%\VignetteIndexEntry{Package clpAPI -- Quick Start}
+\author{Gabriel Gelius-Dietrich}
+
+\maketitle
+
+\section{Introduction}
+The package \pkgname{} provides a low level interface to the C~API of
+COIN-OR Clp\footnote{COIN-OR linear programming version 1.12.0 or higher
+\url{https://projects.coin-or.org/Clp}} (COIN-OR linear programming).
+The package \pkgname{} relies on a separate installation of COIN-OR Clp.
+
+\section{Installation}
+See \Comp{INSTALL} for installation instructions and platform specific details.
+
+\section{Usage}
+
+In the following, an example lp-problem will be created and solved:
+
+\noindent
+\hspace{.5in} maximize
+$$z = 5 x_1 + 4 x_2 + 3 x_3$$
+\hspace{.5in} subject to
+$$
+\begin{array}{r@{\:}c@{\:}r@{\:}c@{\:}r@{\:}c@{\:}r}
+2 x_1 &+& 3 x_2 &+& x_3 & \leq 5 \\
+4 x_1 &+& x_2 &+& 2 x_3 & \leq 11 \\
+3 x_1 &+& 4 x_2 &+& 2 x_3 & \leq 8 \\
+\end{array}
+$$
+\hspace{.5in} where all variables are non-negative
+$$x_1 \geq 0, \ x_2 \geq 0, \ x_3 \geq 0$$
+
+\noindent
+Load the library.
+<<>>=
+library(clpAPI)
+@
+Create a problem object.
+<<>>=
+prob <- initProbCLP()
+@
+Set the direction of optimization ($-1$: maximize, $1$: minimize).
+<<>>=
+setObjDirCLP(prob, -1)
+@
+Prepare data structures for the problem object. Number of columns and rows:
+<<>>=
+nc <- 3
+nr <- 3
+@
+The constraint matrix is passed in column major order format. \textbf{Be
+careful here:} all indices start with 0! Row indices.
+<<>>=
+ia <- c(0, 1, 2, 0, 1, 2, 0, 1, 2)
+@
+Column indices.
+<<>>=
+ja <- c(0, 3, 6, 9)
+@
+Non-zero elements.
+<<>>=
+ar <- c(2, 4, 3, 3, 1, 4, 1, 2, 2)
+@
+Lower bounds for the variables (columns).
+<<>>=
+clb <- rep(0, 3)
+@
+Right hand side (row upper bounds for the rows).
+<<>>=
+rub <- c(5, 11, 8)
+@
+Objective coefficients.
+<<>>=
+obj <- c(5, 4, 3)
+@
+Load problem data into the problem object.
+<<>>=
+loadProblemCLP(prob, nc, nr, ia, ja, ar, clb, NULL, obj, NULL, rub)
+@
+Solve the problem using the simplex algorithm.
+<<>>=
+solveInitialCLP(prob)
+@
+Retrieve the value of the objective function after optimization.
+<<>>=
+getObjValCLP(prob)
+@
+Retrieve the primal values of the structural variables (columns) after
+optimization.
+<<>>=
+getColPrimCLP(prob)
+@
+Retrieve the dual values of the structural variables (columns) after
+optimization (reduced costs).
+<<>>=
+getColDualCLP(prob)
+@
+Free memory, allacated to the problem object.
+<<>>=
+delProbCLP(prob)
+@
+
+
+\section{Function names}
+
+\subsection{Searching}
+
+The function names in \pkgname{} are different from the names in
+\prgname{COIN-OR Clp},
+e.\,g. the function \texttt{addColsCLP} in \pkgname{} is called
+\texttt{Clp\_addColumns} in \prgname{COIN-OR Clp}. The directory \texttt{inst/}
+containes a file \texttt{c2r.map} which maps a \prgname{COIN-OR Clp} function
+name to the corresponding \pkgname{} function name. Additionally, all man-pages
+contain an alias to the \prgname{COIN-OR Clp} function name. The call
+<<>>=
+help("Clp_addColumns")
+@
+will bring up the man-page of \texttt{addColsCLP}.
+
+
+\subsection{Mapping}
+
+The file \texttt{c2r.map} in \texttt{inst/} maps the \pkgname{} function names
+to the orininal \prgname{COIN-OR Clp} function names of its C-API.
+To use the latter, run
+<<>>=
+c2r <- system.file(package = "clpAPI", "c2r.map")
+source(c2r)
+@
+now either
+<<>>=
+pr1 <- initProbCLP()
+delProbCLP(pr1)
+@
+or the original functions
+<<>>=
+pr2 <- Clp_newModel()
+Clp_deleteModel(pr2)
+@
+work both. Keep in mind that the mapping only affects the function names not the
+arguments of a function.
+
+
+\end{document}